RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SF3A1Q15459 793 aaKnown RBP11.36□□□□□ -0.59
USP39-214ENST00000474572 PKN1Q16512 942 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 ANO6Q4KMQ2 910 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 IFIT1BQ5T764 474 aaKnown RBP11.36□□□□□ -0.59
USP39-214ENST00000474572 ZNF772Q68DY9 489 aaPredicted RBP11.36□□□□□ -0.59
USP39-214ENST00000474572 SASS6Q6UVJ0 657 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 TMTC3Q6ZXV5 915 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 CATIPQ7Z7H3 387 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 NOSTRINQ8IVI9 506 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 CKAP2LQ8IYA6 745 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 TBC1D16Q8TBP0 767 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 CBX8Q9HC52 389 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 ZKSCAN5Q9Y2L8 839 aa11.36□□□□□ -0.59
USP39-214ENST00000474572 CNTNAP5Q8WYK1 1306 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 SNED1Q8TER0 1413 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 GPR75-ASB3A0A0A6YYF3 556 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 ZNF500O60304 480 aaPredicted RBP11.35□□□□□ -0.59
USP39-214ENST00000474572 KINO60870 393 aaKnown RBP11.35□□□□□ -0.59
USP39-214ENST00000474572 WDHD1O75717 1129 aaPredicted RBP11.35□□□□□ -0.59
USP39-214ENST00000474572 ADCY5O95622 1261 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 BAG3O95817 575 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 CYP2D6P10635 497 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 EVX2Q03828 476 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 PDE4BQ07343 736 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 STX1AQ16623 288 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 RCSD1Q6JBY9 416 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 DIS3L2Q8IYB7 885 aaKnown RBP11.35□□□□□ -0.59
USP39-214ENST00000474572 STK11IPQ8N1F8 1099 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 NLGN1Q8N2Q7 840 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 JMYQ8N9B5 988 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 FLAD1Q8NFF5 587 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 SH3RF3Q8TEJ3 882 aaPredicted RBP11.35□□□□□ -0.59
USP39-214ENST00000474572 TBC1D22AQ8WUA7 517 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 SHISA4Q96DD7 197 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 TIGD1Q96MW7 591 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 POLLQ9UGP5 575 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 C10orf71Q711Q0 1435 aa11.35□□□□□ -0.59
USP39-214ENST00000474572 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
USP39-214ENST00000474572 CUTAO60888 179 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 PRDM1O75626 825 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 USP17L8P0C7I0 530 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 NDUFA8P51970 172 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 IQCB1Q15051 598 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 SAFBQ15424 915 aaKnown RBP eCLIP11.34□□□□□ -0.59
USP39-214ENST00000474572 CCDC178Q5BJE1 867 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 RILPL1Q5EBL4 403 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 DGKHQ86XP1 1220 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
USP39-214ENST00000474572 ELOA2Q8IYF1 753 aaPredicted RBP11.34□□□□□ -0.59
USP39-214ENST00000474572 NUP133Q8WUM0 1156 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 GPR101Q96P66 508 aaPredicted RBP11.34□□□□□ -0.59
USP39-214ENST00000474572 PHF20Q9BVI0 1012 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 JAG2Q9Y219 1238 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 SUGT1Q9Y2Z0 365 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 ATP6V0A2Q9Y487 856 aa11.34□□□□□ -0.59
USP39-214ENST00000474572 GREB1LQ9C091 1923 aaPredicted RBP11.33□□□□□ -0.6
USP39-214ENST00000474572 A0A1B0GVL5 298 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 BTBD18B2RXH4 712 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 PLEKHA8P1O95397 391 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 SRGNP10124 158 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 NPR1P16066 1061 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 PFKFB1P16118 471 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 PLCG2P16885 1265 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 BTDP43251 543 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 USP5P45974 858 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 TOB1P50616 345 aaPredicted RBP11.33□□□□□ -0.6
USP39-214ENST00000474572 RHBDL3P58872 404 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 DIXDC1Q155Q3 683 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 RESP18Q5W5W9 173 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 TNFRSF25Q93038 417 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 NOL10Q9BSC4 688 aaKnown RBP11.33□□□□□ -0.6
USP39-214ENST00000474572 COA1Q9GZY4 146 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 MCM9Q9NXL9 1143 aa11.33□□□□□ -0.6
USP39-214ENST00000474572 ADAMTSL1Q8N6G6 1762 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 TSPY2A6NKD2 308 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 ZNF202O95125 648 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 XBP1P17861 261 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 PTPREP23469 700 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 MSNP26038 577 aaKnown RBP11.32□□□□□ -0.6
USP39-214ENST00000474572 NOVP48745 357 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 ZNF165P49910 485 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 GNL2Q13823 731 aaKnown RBP11.32□□□□□ -0.6
USP39-214ENST00000474572 NPY5RQ15761 445 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 SHC4Q6S5L8 630 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 SARM1Q6SZW1 724 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 C11orf57Q6ZUT1 292 aaPredicted RBP11.32□□□□□ -0.6
USP39-214ENST00000474572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.32□□□□□ -0.6
USP39-214ENST00000474572 LUZP1Q86V48 1076 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 SLF2Q8IX21 1173 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 CMTR1Q8N1G2 835 aaKnown RBP11.32□□□□□ -0.6
USP39-214ENST00000474572 SRBD1Q8N5C6 995 aaKnown RBP11.32□□□□□ -0.6
USP39-214ENST00000474572 BPIFA3Q9BQP9 254 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 DNAJC25Q9H1X3 360 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 ANO10Q9NW15 660 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 KCNJ14Q9UNX9 436 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 MYH8P13535 1937 aa11.32□□□□□ -0.6
USP39-214ENST00000474572 PLIN4Q96Q06 1357 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms