RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 WIPI1Q5MNZ9 446 aaPredicted RBP7.13□□□□□ -1.27
UFD1-207ENST00000474226 CYFIP1Q7L576 1253 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 TMC4Q7Z404 712 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 STK11IPQ8N1F8 1099 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 BCL7CQ8WUZ0 217 aaPredicted RBP7.13□□□□□ -1.27
UFD1-207ENST00000474226 MISP3Q96FF7 219 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 PRDM10Q9NQV6 1147 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 ADGRE2Q9UHX3 823 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 PCDHB5Q9Y5E4 795 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 SNCAIPQ9Y6H5 919 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 U3KQE9 123 aa7.13□□□□□ -1.27
UFD1-207ENST00000474226 ERCC3P19447 782 aa7.12□□□□□ -1.27
UFD1-207ENST00000474226 OXCT1P55809 520 aa7.12□□□□□ -1.27
UFD1-207ENST00000474226 SEPT6Q14141 434 aa7.12□□□□□ -1.27
UFD1-207ENST00000474226 TAF1CQ15572 869 aaPredicted RBP7.12□□□□□ -1.27
UFD1-207ENST00000474226 AGMOQ6ZNB7 445 aa7.12□□□□□ -1.27
UFD1-207ENST00000474226 AGBL5Q8NDL9 886 aa7.12□□□□□ -1.27
UFD1-207ENST00000474226 MKNK2Q9HBH9 465 aa7.12□□□□□ -1.27
UFD1-207ENST00000474226 PAK6Q9NQU5 681 aaPredicted RBP7.12□□□□□ -1.27
UFD1-207ENST00000474226 CUL7Q14999 1698 aa7.12□□□□□ -1.27
UFD1-207ENST00000474226 CLASP1Q7Z460 1538 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 VPS8Q8N3P4 1428 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 CEACAM5P06731 702 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 RLBP1P12271 317 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 CDK8P49336 464 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 ST13P50502 369 aaKnown RBP7.11□□□□□ -1.27
UFD1-207ENST00000474226 ETF1P62495 437 aaKnown RBP7.11□□□□□ -1.27
UFD1-207ENST00000474226 IFI16Q16666 785 aaKnown RBP7.11□□□□□ -1.27
UFD1-207ENST00000474226 ZNF574Q6ZN55 896 aaPredicted RBP7.11□□□□□ -1.27
UFD1-207ENST00000474226 ARMCX6Q7L4S7 300 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 WNT10AQ9GZT5 417 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 MIR1-1HGQ9H1L0 117 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 GTF2IRD1Q9UHL9 959 aa7.11□□□□□ -1.27
UFD1-207ENST00000474226 SORBS3O60504 671 aa7.1□□□□□ -1.27
UFD1-207ENST00000474226 CTSHP09668 335 aa7.1□□□□□ -1.27
UFD1-207ENST00000474226 ITIH2P19823 946 aa7.1□□□□□ -1.27
UFD1-207ENST00000474226 TAGLNQ01995 201 aaKnown RBP7.1□□□□□ -1.27
UFD1-207ENST00000474226 BNIP3Q12983 259 aa7.1□□□□□ -1.27
UFD1-207ENST00000474226 HEXIM2Q96MH2 286 aaKnown RBP7.1□□□□□ -1.27
UFD1-207ENST00000474226 NOC4LQ9BVI4 516 aaKnown RBP7.1□□□□□ -1.27
UFD1-207ENST00000474226 FBRSQ9HAH7 460 aa7.1□□□□□ -1.27
UFD1-207ENST00000474226 MRS2Q9HD23 443 aa7.1□□□□□ -1.27
UFD1-207ENST00000474226 FHOD3Q2V2M9 1422 aa7.1□□□□□ -1.27
UFD1-207ENST00000474226 PBRM1Q86U86 1689 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 TSPOAP1O95153 1857 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 PAX4O43316 350 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 LRIG2O94898 1065 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 TFE3P19532 575 aaPredicted RBP7.09□□□□□ -1.27
UFD1-207ENST00000474226 PRKCQQ04759 706 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 SPRED2Q7Z698 418 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 CRELD1Q96HD1 420 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 VTI1BQ9UEU0 232 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 VAV3Q9UKW4 847 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 PLAGL2Q9UPG8 496 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 TLR6Q9Y2C9 796 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 GRIN2AQ12879 1464 aa7.09□□□□□ -1.27
UFD1-207ENST00000474226 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
UFD1-207ENST00000474226 TTBK1Q5TCY1 1321 aaPredicted RBP7.08□□□□□ -1.28
UFD1-207ENST00000474226 TMEM265A0A087WTH1 108 aa7.08□□□□□ -1.28
UFD1-207ENST00000474226 IGF2BP3O00425 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
UFD1-207ENST00000474226 SLBPQ14493 270 aaKnown RBP eCLIP7.08□□□□□ -1.28
UFD1-207ENST00000474226 PLCL1Q15111 1095 aa7.08□□□□□ -1.28
UFD1-207ENST00000474226 FAM214BQ7L5A3 538 aa7.08□□□□□ -1.28
UFD1-207ENST00000474226 WFDC3Q8IUB2 231 aa7.08□□□□□ -1.28
UFD1-207ENST00000474226 HID1Q8IV36 788 aa7.08□□□□□ -1.28
UFD1-207ENST00000474226 HRASLS5Q96KN8 279 aa7.08□□□□□ -1.28
UFD1-207ENST00000474226 FOXQ1Q9C009 403 aa7.08□□□□□ -1.28
UFD1-207ENST00000474226 MAGI1Q96QZ7 1491 aaPredicted RBP7.08□□□□□ -1.28
UFD1-207ENST00000474226 GFRA2O00451 464 aa7.07□□□□□ -1.28
UFD1-207ENST00000474226 EOMESO95936 686 aa7.07□□□□□ -1.28
UFD1-207ENST00000474226 GRK4P32298 578 aa7.07□□□□□ -1.28
UFD1-207ENST00000474226 NKG7Q16617 165 aa7.07□□□□□ -1.28
UFD1-207ENST00000474226 AOC3Q16853 763 aa7.07□□□□□ -1.28
UFD1-207ENST00000474226 TSNAXIP1Q2TAA8 658 aa7.07□□□□□ -1.28
UFD1-207ENST00000474226 DIEXFQ68CQ4 756 aaKnown RBP7.07□□□□□ -1.28
UFD1-207ENST00000474226 CBLL1Q75N03 491 aa7.07□□□□□ -1.28
UFD1-207ENST00000474226 PHC3Q8NDX5 983 aa7.07□□□□□ -1.28
UFD1-207ENST00000474226 JARID2Q92833 1246 aaPredicted RBP7.07□□□□□ -1.28
UFD1-207ENST00000474226 PRDM5Q9NQX1 630 aaPredicted RBP7.07□□□□□ -1.28
UFD1-207ENST00000474226 GNAT3A8MTJ3 354 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 SLITRK5O94991 958 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 CD8BP10966 210 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 ITGAEP38570 1179 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 CAP2P40123 477 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 CD96P40200 585 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 MFSD2AQ8NA29 543 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 MIPEPQ99797 713 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 PCGF6Q9BYE7 350 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 TNKS2Q9H2K2 1166 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 MAPK8IP1Q9UQF2 711 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 TACC3Q9Y6A5 838 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 NUP160Q12769 1436 aa7.06□□□□□ -1.28
UFD1-207ENST00000474226 CEP170Q5SW79 1584 aa7.05□□□□□ -1.28
UFD1-207ENST00000474226 F6X3S4 739 aa7.05□□□□□ -1.28
UFD1-207ENST00000474226 PRAMEF13Q5VWM6 474 aa7.05□□□□□ -1.28
UFD1-207ENST00000474226 TPX2Q9ULW0 747 aaKnown RBP7.05□□□□□ -1.28
UFD1-207ENST00000474226 SNX11Q9Y5W9 270 aa7.05□□□□□ -1.28
UFD1-207ENST00000474226 CST3P01034 146 aaPredicted RBP7.04□□□□□ -1.28
UFD1-207ENST00000474226 PGRP06401 933 aa7.04□□□□□ -1.28
UFD1-207ENST00000474226 RPL6Q02878 288 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 656.6 ms