RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 BACE1P56817 501 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 HDAC1Q13547 482 aaPredicted RBP13.49□□□□□ -0.25
CKS1B-206ENST00000474215 SHROOM1Q2M3G4 852 aaPredicted RBP13.49□□□□□ -0.25
CKS1B-206ENST00000474215 CERKLQ49MI3 558 aaPredicted RBP13.49□□□□□ -0.25
CKS1B-206ENST00000474215 TSHZ3Q63HK5 1081 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 KBTBD3Q8NAB2 608 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 SDR42E1Q8WUS8 393 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 ATP8A2Q9NTI2 1148 aa13.49□□□□□ -0.25
CKS1B-206ENST00000474215 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
CKS1B-206ENST00000474215 SIPA1L1O43166 1804 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 TTC41PQ6P2S7 1318 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 C19orf81C9J6K1 198 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 USP17L10C9JJH3 530 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 ERC2O15083 957 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 GH2P01242 217 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 SHMT1P34896 483 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 PSMC4P43686 418 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 PRMT2P55345 433 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 MLLT1Q03111 559 aaPredicted RBP13.48□□□□□ -0.25
CKS1B-206ENST00000474215 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.253e-23■□□□□ 9
CKS1B-206ENST00000474215 MTMR2Q13614 643 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 SMCR8Q8TEV9 937 aaPredicted RBP13.48□□□□□ -0.25
CKS1B-206ENST00000474215 GCC1Q96CN9 775 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 TRIM47Q96LD4 638 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 PUS7LQ9H0K6 701 aaKnown RBP13.48□□□□□ -0.25
CKS1B-206ENST00000474215 PNMA3Q9UL41 463 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 PHIPQ8WWQ0 1821 aa13.48□□□□□ -0.25
CKS1B-206ENST00000474215 GLRX3O76003 335 aaKnown RBP13.47□□□□□ -0.25
CKS1B-206ENST00000474215 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
CKS1B-206ENST00000474215 FMNL1O95466 1100 aaPredicted RBP13.47□□□□□ -0.25
CKS1B-206ENST00000474215 OSBPP22059 807 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 CTGFP29279 349 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 GABPAQ06546 454 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
CKS1B-206ENST00000474215 DDRGK1Q96HY6 314 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 CABP5Q9NP86 173 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 TAOK2Q9UL54 1235 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 PTCH2Q9Y6C5 1203 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 HTTP42858 3142 aa13.47□□□□□ -0.25
CKS1B-206ENST00000474215 RNF113AO15541 343 aaKnown RBP13.46□□□□□ -0.25
CKS1B-206ENST00000474215 ZFYP08048 801 aaPredicted RBP13.46□□□□□ -0.25
CKS1B-206ENST00000474215 CYP2D6P10635 497 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 MX1P20591 662 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 HOXD10P28358 340 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 EVX2Q03828 476 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 RAB3GAP1Q15042 981 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 NBPF11Q86T75 865 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 PI4K2BQ8TCG2 481 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 ARMC5Q96C12 935 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 STRBPQ96SI9 672 aaKnown RBP13.46□□□□□ -0.25
CKS1B-206ENST00000474215 ASCC2Q9H1I8 757 aaPredicted RBP13.46□□□□□ -0.25
CKS1B-206ENST00000474215 SLC4A4Q9Y6R1 1079 aa13.46□□□□□ -0.25
CKS1B-206ENST00000474215 MYH1P12882 1939 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L12C9JPN9 530 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L21D6R901 530 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 HOXA7P31268 230 aaPredicted RBP13.45□□□□□ -0.26
CKS1B-206ENST00000474215 GCLCP48506 637 aaPredicted RBP13.45□□□□□ -0.26
CKS1B-206ENST00000474215 FCGRTP55899 365 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 LRRFIP1Q32MZ4 808 aaKnown RBP13.45□□□□□ -0.26
CKS1B-206ENST00000474215 SLC9C1Q4G0N8 1177 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 C12orf60Q5U649 245 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 USP17L2Q6R6M4 530 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 AMOTL1Q8IY63 956 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 ANKRD13CQ8N6S4 541 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 APPBP2Q92624 585 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 RWDD1Q9H446 243 aaPredicted RBP13.45□□□□□ -0.26
CKS1B-206ENST00000474215 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 SRRDQ9UH36 339 aa13.45□□□□□ -0.26
CKS1B-206ENST00000474215 SUPT16HQ9Y5B9 1047 aaKnown RBP13.45□□□□□ -0.26
CKS1B-206ENST00000474215 ATAD5Q96QE3 1844 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 GUCY1A2P33402 732 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 CTR9Q6PD62 1173 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 EXOC6Q8TAG9 804 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 OSBP2Q969R2 916 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 KIAA1683Q9H0B3 1180 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 STAP2Q9UGK3 403 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 SWAP70Q9UH65 585 aa13.44□□□□□ -0.26
CKS1B-206ENST00000474215 SALL3Q9BXA9 1300 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 PTPRFP10586 1907 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 CYP2D7A0A087X1C5 515 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 MPHOSPH10O00566 681 aaKnown RBP13.43□□□□□ -0.26
CKS1B-206ENST00000474215 USP14P54578 494 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 IRX3P78415 501 aaPredicted RBP13.43□□□□□ -0.26
CKS1B-206ENST00000474215 SEPT2Q15019 361 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 FAM110CQ1W6H9 321 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 GIMAP6Q6P9H5 292 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 SLC44A5Q8NCS7 719 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 ACER1Q8TDN7 264 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 ZNF333Q96JL9 665 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
CKS1B-206ENST00000474215 FEZ1Q99689 392 aa13.43□□□□□ -0.26
CKS1B-206ENST00000474215 MYPNQ86TC9 1320 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 GSG1L2A8MUP6 293 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 GNAT2P19087 354 aa13.42□□□□□ -0.26
CKS1B-206ENST00000474215 CDK8P49336 464 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 306.2 ms