RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
COPS7B-219ENST00000474042 FOXP4Q8IVH2 680 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-219ENST00000474042 DPF3Q92784 378 aa16.38■□□□□ 0.21
COPS7B-219ENST00000474042 EAF2Q96CJ1 260 aaPredicted RBP16.38■□□□□ 0.21
COPS7B-219ENST00000474042 PRO3102Q9H379 93 aa16.38■□□□□ 0.21
COPS7B-219ENST00000474042 GJD2Q9UKL4 321 aa16.38■□□□□ 0.21
COPS7B-219ENST00000474042 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
COPS7B-219ENST00000474042 ZBTB21Q9ULJ3 1066 aa16.38■□□□□ 0.21
COPS7B-219ENST00000474042 HMGCRP04035 888 aa16.37■□□□□ 0.21
COPS7B-219ENST00000474042 DYNLL1P63167 89 aaKnown RBP16.37■□□□□ 0.21
COPS7B-219ENST00000474042 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
COPS7B-219ENST00000474042 CRACR2BQ8N4Y2 399 aaPredicted RBP16.37■□□□□ 0.21
COPS7B-219ENST00000474042 DEFB118Q96PH6 123 aa16.37■□□□□ 0.21
COPS7B-219ENST00000474042 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.37■□□□□ 0.21
COPS7B-219ENST00000474042 CCDC8Q9H0W5 538 aaPredicted RBP16.37■□□□□ 0.21
COPS7B-219ENST00000474042 C19orf81C9J6K1 198 aa16.36■□□□□ 0.21
COPS7B-219ENST00000474042 GDF11O95390 407 aa16.36■□□□□ 0.21
COPS7B-219ENST00000474042 HLA-DOAP06340 250 aa16.36■□□□□ 0.21
COPS7B-219ENST00000474042 CYP7A1P22680 504 aa16.36■□□□□ 0.21
COPS7B-219ENST00000474042 IRX3P78415 501 aaPredicted RBP16.36■□□□□ 0.21
COPS7B-219ENST00000474042 CERS3Q8IU89 383 aa16.36■□□□□ 0.21
COPS7B-219ENST00000474042 TMOD4Q9NZQ9 345 aa16.36■□□□□ 0.21
COPS7B-219ENST00000474042 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
COPS7B-219ENST00000474042 TAOK2Q9UL54 1235 aa16.36■□□□□ 0.21
COPS7B-219ENST00000474042 RANBP2P49792 3224 aaKnown RBP16.35■□□□□ 0.21
COPS7B-219ENST00000474042 USP17L10C9JJH3 530 aa16.35■□□□□ 0.21
COPS7B-219ENST00000474042 HERVK_113P62684 666 aa16.35■□□□□ 0.21
COPS7B-219ENST00000474042 TMED8Q6PL24 325 aaPredicted RBP16.35■□□□□ 0.21
COPS7B-219ENST00000474042 TRIM34Q9BYJ4 488 aa16.35■□□□□ 0.21
COPS7B-219ENST00000474042 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
COPS7B-219ENST00000474042 RBM27Q9P2N5 1060 aaKnown RBP16.35■□□□□ 0.21
COPS7B-219ENST00000474042 NR2E3Q9Y5X4 410 aa16.35■□□□□ 0.21
COPS7B-219ENST00000474042 FRMPD3Q5JV73 1810 aa16.35■□□□□ 0.21
COPS7B-219ENST00000474042 IDH1O75874 414 aaKnown RBP16.34■□□□□ 0.21
COPS7B-219ENST00000474042 TFRCP02786 760 aaKnown RBP16.34■□□□□ 0.21
COPS7B-219ENST00000474042 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
COPS7B-219ENST00000474042 P2RX7Q99572 595 aaKnown RBP16.34■□□□□ 0.21
COPS7B-219ENST00000474042 EHD4Q9H223 541 aa16.34■□□□□ 0.21
COPS7B-219ENST00000474042 NDUFB9Q9Y6M9 179 aa16.34■□□□□ 0.21
COPS7B-219ENST00000474042 TRIM32Q13049 653 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 MAP3K21Q5TCX8 1036 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 TATDN1Q6P1N9 297 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 ERC1Q8IUD2 1116 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 MAGEB6Q8N7X4 407 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 ANKLE1Q8NAG6 615 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 GTF3C2Q8WUA4 911 aaPredicted RBP16.33■□□□□ 0.2
COPS7B-219ENST00000474042 SOCS4Q8WXH5 440 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 TRIB2Q92519 343 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 C12orf42Q96LP6 360 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 EXOC6BQ9Y2D4 811 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 ZBED9Q6R2W3 1325 aa16.33■□□□□ 0.2
COPS7B-219ENST00000474042 PEX10O60683 326 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 GH2P01242 217 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 USP17L2Q6R6M4 530 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 POTEEQ6S8J3 1075 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 AACSQ86V21 672 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 RPTORQ8N122 1335 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 GPRC5AQ8NFJ5 357 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 DIS3LQ8TF46 1054 aaKnown RBP16.32■□□□□ 0.2
COPS7B-219ENST00000474042 PAWRQ96IZ0 340 aaKnown RBP16.32■□□□□ 0.2
COPS7B-219ENST00000474042 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 RBPJLQ9UBG7 517 aa16.32■□□□□ 0.2
COPS7B-219ENST00000474042 A0A0G2JMZ2 1700 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 EVI5O60447 810 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 XRCC5P13010 732 aaKnown RBP16.31■□□□□ 0.2
COPS7B-219ENST00000474042 USP5P45974 858 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 ERVK-9P63128 1117 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 ERVK-24P63145 666 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 MAP3K12Q12852 859 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 USP6NLQ92738 828 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
COPS7B-219ENST00000474042 HMX1Q9NP08 348 aaPredicted RBP16.31■□□□□ 0.2
COPS7B-219ENST00000474042 SERPINB13Q9UIV8 391 aa16.31■□□□□ 0.2
COPS7B-219ENST00000474042 MYH8P13535 1937 aa16.3■□□□□ 0.2
COPS7B-219ENST00000474042 MAPK4P31152 587 aa16.3■□□□□ 0.2
COPS7B-219ENST00000474042 MNX1P50219 401 aaPredicted RBP16.3■□□□□ 0.2
COPS7B-219ENST00000474042 NECAB2Q7Z6G3 386 aa16.3■□□□□ 0.2
COPS7B-219ENST00000474042 MIER1Q8N108 512 aa16.3■□□□□ 0.2
COPS7B-219ENST00000474042 NUDT12Q9BQG2 462 aa16.3■□□□□ 0.2
COPS7B-219ENST00000474042 PORCNQ9H237 461 aa16.3■□□□□ 0.2
COPS7B-219ENST00000474042 SZT2Q5T011 3432 aa16.3■□□□□ 0.2
COPS7B-219ENST00000474042 ZNF236Q9UL36 1845 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 A0A1W2PPC1 479 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 CYP2B6P20813 491 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 Q3C1V9 767 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 MORN1Q5T089 497 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 GPR142Q7Z601 462 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 KIAA1683Q9H0B3 1180 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 OGDHLQ9ULD0 1010 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 MYH7P12883 1935 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 RLFQ13129 1914 aa16.29■□□□□ 0.2
COPS7B-219ENST00000474042 CNMDO75829 334 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 PRKAR2AP13861 404 aaKnown RBP16.28■□□□□ 0.2
COPS7B-219ENST00000474042 SHMT1P34896 483 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 GABPAQ06546 454 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 PDE3AQ14432 1141 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 HSP90AB4PQ58FF6 505 aa16.28■□□□□ 0.2
COPS7B-219ENST00000474042 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms