RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 ZNF280CQ8ND82 737 aa21.2■□□□□ 0.98
RPUSD3-214ENST00000473522 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-214ENST00000473522 ARPP21Q9UBL0 812 aaPredicted RBP21.2■□□□□ 0.98
RPUSD3-214ENST00000473522 TTC22Q5TAA0 569 aa21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 COL13A1Q5TAT6 717 aaPredicted RBP21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 FASTKD5Q7L8L6 764 aaKnown RBP21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 ANKRD23Q86SG2 305 aa21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 CCDC84Q86UT8 332 aaPredicted RBP21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 AMOTL1Q8IY63 956 aa21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 FAM227BQ96M60 508 aa21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 R3HDMLQ9H3Y0 253 aa21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 EPB41L4AQ9HCS5 686 aaPredicted RBP21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 ZBTB21Q9ULJ3 1066 aa21.19■□□□□ 0.98
RPUSD3-214ENST00000473522 CYP2D7A0A087X1C5 515 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 SMIM22K7EJ46 135 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 FOXP2O15409 715 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 GDF11O95390 407 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 SPP2Q13103 211 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 SH3D19Q5HYK7 790 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 ERICH6BQ5W0A0 696 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 GPAT2Q6NUI2 795 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 C16orf86Q6ZW13 317 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 DYNLL2Q96FJ2 89 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 AS3MTQ9HBK9 375 aa21.18■□□□□ 0.98
RPUSD3-214ENST00000473522 A0A0D9SFI3 127 aa21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 GPR25O00155 361 aa21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 GH2P01242 217 aa21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 APPP05067 770 aa21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 NEFLP07196 543 aa21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 GSPT1P15170 499 aaKnown RBP21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 CDK8P49336 464 aa21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 ABCB5Q2M3G0 1257 aa21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 SHROOM1Q2M3G4 852 aaPredicted RBP21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 NACAP1Q9BZK3 213 aa21.17■□□□□ 0.98
RPUSD3-214ENST00000473522 TRIM75PA6NK02 468 aa21.16■□□□□ 0.98
RPUSD3-214ENST00000473522 HIP1O00291 1037 aa21.16■□□□□ 0.98
RPUSD3-214ENST00000473522 NMIQ13287 307 aaPredicted RBP21.16■□□□□ 0.98
RPUSD3-214ENST00000473522 ALX1Q15699 326 aa21.16■□□□□ 0.98
RPUSD3-214ENST00000473522 CCDC129Q6ZRS4 1044 aa21.16■□□□□ 0.98
RPUSD3-214ENST00000473522 SLC44A5Q8NCS7 719 aa21.16■□□□□ 0.98
RPUSD3-214ENST00000473522 CCDC17Q96LX7 622 aa21.16■□□□□ 0.98
RPUSD3-214ENST00000473522 CABP5Q9NP86 173 aa21.16■□□□□ 0.98
RPUSD3-214ENST00000473522 C19orf81C9J6K1 198 aa21.15■□□□□ 0.98
RPUSD3-214ENST00000473522 GUCY1A2P33402 732 aa21.15■□□□□ 0.98
RPUSD3-214ENST00000473522 BACE1P56817 501 aa21.15■□□□□ 0.98
RPUSD3-214ENST00000473522 CRHR2Q13324 411 aa21.15■□□□□ 0.98
RPUSD3-214ENST00000473522 PROCA1Q8NCQ7 364 aaPredicted RBP21.15■□□□□ 0.98
RPUSD3-214ENST00000473522 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
RPUSD3-214ENST00000473522 ZFYVE28Q9HCC9 887 aa21.15■□□□□ 0.98
RPUSD3-214ENST00000473522 SLC45A1Q9Y2W3 748 aa21.15■□□□□ 0.98
RPUSD3-214ENST00000473522 PDHXO00330 501 aa21.14■□□□□ 0.97
RPUSD3-214ENST00000473522 TDO2P48775 406 aa21.14■□□□□ 0.97
RPUSD3-214ENST00000473522 VPS53Q5VIR6 699 aa21.14■□□□□ 0.97
RPUSD3-214ENST00000473522 ZNF296Q8WUU4 475 aaPredicted RBP21.14■□□□□ 0.97
RPUSD3-214ENST00000473522 OTOFQ9HC10 1997 aa21.14■□□□□ 0.97
RPUSD3-214ENST00000473522 MINDY4BA8MYZ0 360 aa21.13■□□□□ 0.97
RPUSD3-214ENST00000473522 USP17L10C9JJH3 530 aa21.13■□□□□ 0.97
RPUSD3-214ENST00000473522 TAF1CQ15572 869 aaPredicted RBP21.13■□□□□ 0.97
RPUSD3-214ENST00000473522 TLR2O60603 784 aa21.12■□□□□ 0.97
RPUSD3-214ENST00000473522 HSPD1P10809 573 aaKnown RBP21.12■□□□□ 0.97
RPUSD3-214ENST00000473522 TMEM179Q6ZVK1 233 aa21.12■□□□□ 0.97
RPUSD3-214ENST00000473522 ZNF589Q86UQ0 364 aaPredicted RBP21.12■□□□□ 0.97
RPUSD3-214ENST00000473522 NAPBQ9H115 298 aa21.12■□□□□ 0.97
RPUSD3-214ENST00000473522 AGTPBP1Q9UPW5 1226 aa21.12■□□□□ 0.97
RPUSD3-214ENST00000473522 FKTNO75072 461 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 FGAP02671 866 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 HMGCS2P54868 508 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 MFAP1P55081 439 aaKnown RBP21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 SEPT2Q15019 361 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 RAB3GAP1Q15042 981 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 CWC27Q6UX04 472 aaKnown RBP21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 SIAH1Q8IUQ4 282 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 DIAPH3Q9NSV4 1193 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 ANAPC4Q9UJX5 808 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 SIPA1L1O43166 1804 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 FOCADQ5VW36 1801 aa21.11■□□□□ 0.97
RPUSD3-214ENST00000473522 ROBO3Q96MS0 1386 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 CCDC171Q6TFL3 1326 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 AKR1B1P15121 316 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 PPARAQ07869 468 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 MTMR2Q13614 643 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 C17orf99Q6UX52 265 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 GADL1Q6ZQY3 521 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 KIAA1683Q9H0B3 1180 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 ZNF287Q9HBT7 754 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 EMILIN3Q9NT22 766 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 AK9Q5TCS8 1911 aa21.1■□□□□ 0.97
RPUSD3-214ENST00000473522 RASA1P20936 1047 aa21.09■□□□□ 0.97
RPUSD3-214ENST00000473522 HOXA7P31268 230 aaPredicted RBP21.09■□□□□ 0.97
RPUSD3-214ENST00000473522 TREML2Q5T2D2 321 aa21.09■□□□□ 0.97
RPUSD3-214ENST00000473522 USP17L2Q6R6M4 530 aa21.09■□□□□ 0.97
RPUSD3-214ENST00000473522 ACER1Q8TDN7 264 aa21.09■□□□□ 0.97
RPUSD3-214ENST00000473522 C12orf42Q96LP6 360 aa21.09■□□□□ 0.97
RPUSD3-214ENST00000473522 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.09■□□□□ 0.97
RPUSD3-214ENST00000473522 MKNK2Q9HBH9 465 aa21.09■□□□□ 0.97
RPUSD3-214ENST00000473522 MPHOSPH10O00566 681 aaKnown RBP21.08■□□□□ 0.97
RPUSD3-214ENST00000473522 FGRP09769 529 aa21.08■□□□□ 0.97
RPUSD3-214ENST00000473522 CHMLP26374 656 aa21.08■□□□□ 0.97
RPUSD3-214ENST00000473522 USP14P54578 494 aa21.08■□□□□ 0.97
RPUSD3-214ENST00000473522 SP3Q02447 781 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms