RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 MRPL50Q8N5N7 158 aaKnown RBP17.23■□□□□ 0.35
SMURF1-203ENST00000472627 LPAR1Q92633 364 aa17.23■□□□□ 0.35
SMURF1-203ENST00000472627 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
SMURF1-203ENST00000472627 PLXNB2O15031 1838 aa17.23■□□□□ 0.35
SMURF1-203ENST00000472627 ATAD5Q96QE3 1844 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 FOSL2P15408 326 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 CNGA1P29973 690 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 ATN1P54259 1190 aaPredicted RBP17.22■□□□□ 0.35
SMURF1-203ENST00000472627 MAP2K5Q13163 448 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 CCL14Q16627 93 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 MORN1Q5T089 497 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 TEX11Q8IYF3 940 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 CRACR2BQ8N4Y2 399 aaPredicted RBP17.22■□□□□ 0.35
SMURF1-203ENST00000472627 USP6NLQ92738 828 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 EDC3Q96F86 508 aaKnown RBP17.22■□□□□ 0.35
SMURF1-203ENST00000472627 SEMA6BQ9H3T3 888 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 TXNRD2Q9NNW7 524 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 IVNS1ABPQ9Y6Y0 642 aa17.22■□□□□ 0.35
SMURF1-203ENST00000472627 ADORA1P30542 326 aa17.21■□□□□ 0.35
SMURF1-203ENST00000472627 RTP1P59025 263 aa17.21■□□□□ 0.35
SMURF1-203ENST00000472627 SMAD3P84022 425 aaKnown RBP17.21■□□□□ 0.35
SMURF1-203ENST00000472627 RAI14Q9P0K7 980 aa17.21■□□□□ 0.35
SMURF1-203ENST00000472627 RBPJLQ9UBG7 517 aa17.21■□□□□ 0.35
SMURF1-203ENST00000472627 MAST2Q6P0Q8 1798 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 VCANP13611 3396 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 TMEM265A0A087WTH1 108 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 BAG3O95817 575 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 PLCG2P16885 1265 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 ATP2B2Q01814 1243 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 GORABQ5T7V8 394 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 WDR78Q5VTH9 848 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 ATF7IPQ6VMQ6 1270 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 PORCNQ9H237 461 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 PRDM5Q9NQX1 630 aaPredicted RBP17.2■□□□□ 0.34
SMURF1-203ENST00000472627 ATP11BQ9Y2G3 1177 aa17.2■□□□□ 0.34
SMURF1-203ENST00000472627 KBTBD13C9JR72 458 aa17.19■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L2Q6R6M4 530 aa17.19■□□□□ 0.34
SMURF1-203ENST00000472627 MYLIPQ8WY64 445 aa17.19■□□□□ 0.34
SMURF1-203ENST00000472627 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
SMURF1-203ENST00000472627 RABGAP1Q9Y3P9 1069 aa17.19■□□□□ 0.34
SMURF1-203ENST00000472627 A0A1B0GUL7 405 aa17.18■□□□□ 0.34
SMURF1-203ENST00000472627 SLC15A5A6NIM6 579 aa17.18■□□□□ 0.34
SMURF1-203ENST00000472627 TIMM10P62072 90 aa17.18■□□□□ 0.34
SMURF1-203ENST00000472627 SHHQ15465 462 aa17.18■□□□□ 0.34
SMURF1-203ENST00000472627 FOXP4Q8IVH2 680 aaPredicted RBP17.18■□□□□ 0.34
SMURF1-203ENST00000472627 SPATA5Q8NB90 893 aa17.18■□□□□ 0.34
SMURF1-203ENST00000472627 NSUN4Q96CB9 384 aaKnown RBP17.18■□□□□ 0.34
SMURF1-203ENST00000472627 XAGE2Q96GT9 111 aa17.18■□□□□ 0.34
SMURF1-203ENST00000472627 FEZ1Q99689 392 aa17.18■□□□□ 0.34
SMURF1-203ENST00000472627 RRP1BQ14684 758 aaKnown RBP17.17■□□□□ 0.34
SMURF1-203ENST00000472627 Q3C1V9 767 aa17.17■□□□□ 0.34
SMURF1-203ENST00000472627 TJAP1Q5JTD0 557 aa17.17■□□□□ 0.34
SMURF1-203ENST00000472627 LRP2BPQ9P2M1 347 aa17.17■□□□□ 0.34
SMURF1-203ENST00000472627 ZBTB21Q9ULJ3 1066 aa17.17■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L15C9J2P7 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L13C9JLJ4 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L11C9JVI0 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L18D6R9N7 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L22D6RA61 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L17D6RBQ6 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L19D6RCP7 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L20D6RJB6 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 PEX10O60683 326 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 HLA-DOAP06340 250 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 USP17L24Q0WX57 530 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
SMURF1-203ENST00000472627 PA2G4Q9UQ80 394 aaKnown RBP17.16■□□□□ 0.34
SMURF1-203ENST00000472627 FRMPD3Q5JV73 1810 aa17.15■□□□□ 0.34
SMURF1-203ENST00000472627 TNFRSF10AO00220 468 aa17.15■□□□□ 0.34
SMURF1-203ENST00000472627 HOXC6P09630 235 aa17.15■□□□□ 0.34
SMURF1-203ENST00000472627 COL9A1P20849 921 aa17.15■□□□□ 0.34
SMURF1-203ENST00000472627 PTPREP23469 700 aa17.15■□□□□ 0.34
SMURF1-203ENST00000472627 USP14P54578 494 aa17.15■□□□□ 0.34
SMURF1-203ENST00000472627 SH3RF3Q8TEJ3 882 aaPredicted RBP17.15■□□□□ 0.34
SMURF1-203ENST00000472627 SSH1Q8WYL5 1049 aa17.15■□□□□ 0.34
SMURF1-203ENST00000472627 HMG20BQ9P0W2 317 aa17.15■□□□□ 0.34
SMURF1-203ENST00000472627 LAMA2P24043 3122 aaKnown RBP17.15■□□□□ 0.34
SMURF1-203ENST00000472627 GDF11O95390 407 aa17.14■□□□□ 0.33
SMURF1-203ENST00000472627 C9orf50Q5SZB4 431 aa17.14■□□□□ 0.33
SMURF1-203ENST00000472627 SLC39A5Q6ZMH5 540 aa17.14■□□□□ 0.33
SMURF1-203ENST00000472627 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
SMURF1-203ENST00000472627 BADQ92934 168 aa17.14■□□□□ 0.33
SMURF1-203ENST00000472627 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
SMURF1-203ENST00000472627 LTBP2Q14767 1821 aa17.14■□□□□ 0.33
SMURF1-203ENST00000472627 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
SMURF1-203ENST00000472627 UQCRFS1P1P0C7P4 283 aa17.13■□□□□ 0.33
SMURF1-203ENST00000472627 GRB14Q14449 540 aa17.13■□□□□ 0.33
SMURF1-203ENST00000472627 ALDH1L2Q3SY69 923 aa17.13■□□□□ 0.33
SMURF1-203ENST00000472627 GJC2Q5T442 439 aaPredicted RBP17.13■□□□□ 0.33
SMURF1-203ENST00000472627 NAA16Q6N069 864 aaPredicted RBP17.13■□□□□ 0.33
SMURF1-203ENST00000472627 DPP9Q86TI2 863 aa17.13■□□□□ 0.33
SMURF1-203ENST00000472627 C12orf42Q96LP6 360 aa17.13■□□□□ 0.33
SMURF1-203ENST00000472627 RNPC3Q96LT9 517 aaKnown RBP17.13■□□□□ 0.33
SMURF1-203ENST00000472627 TTYH1Q9H313 450 aaPredicted RBP17.13■□□□□ 0.33
SMURF1-203ENST00000472627 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
SMURF1-203ENST00000472627 AATFQ9NY61 560 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMURF1-203ENST00000472627 FLRT1Q9NZU1 646 aa17.13■□□□□ 0.33
SMURF1-203ENST00000472627 TTC28Q96AY4 2481 aa17.12■□□□□ 0.33
SMURF1-203ENST00000472627 CYP2C19P33261 490 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms