RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 GUCD1Q96NT3 240 aa17.35■□□□□ 0.37
ABCF3-209ENST00000472608 IDI2Q9BXS1 227 aa17.35■□□□□ 0.37
ABCF3-209ENST00000472608 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
ABCF3-209ENST00000472608 COL2A1P02458 1487 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-209ENST00000472608 PFASO15067 1338 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 SMARCA5O60264 1052 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-209ENST00000472608 ENTPD3O75355 529 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 CYP2E1P05181 493 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-209ENST00000472608 COL6A1P12109 1028 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 ATP5JP18859 108 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 IRX6P78412 446 aaPredicted RBP17.34■□□□□ 0.37
ABCF3-209ENST00000472608 MAP3K21Q5TCX8 1036 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 PI16Q6UXB8 463 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 USP40Q9NVE5 1235 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 EYSQ5T1H1 3165 aa17.34■□□□□ 0.37
ABCF3-209ENST00000472608 AK9Q5TCS8 1911 aa17.33■□□□□ 0.37
ABCF3-209ENST00000472608 CTNND1O60716 968 aaKnown RBP17.33■□□□□ 0.36
ABCF3-209ENST00000472608 ZAP70P43403 619 aa17.33■□□□□ 0.36
ABCF3-209ENST00000472608 TRIM32Q13049 653 aa17.33■□□□□ 0.36
ABCF3-209ENST00000472608 SH3BP5LQ7L8J4 393 aa17.33■□□□□ 0.36
ABCF3-209ENST00000472608 ZBTB47Q9UFB7 747 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-209ENST00000472608 PNMA3Q9UL41 463 aa17.33■□□□□ 0.36
ABCF3-209ENST00000472608 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 GAKO14976 1311 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 IGHDP01880 384 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 LDHCP07864 332 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 GCLCP48506 637 aaPredicted RBP17.32■□□□□ 0.36
ABCF3-209ENST00000472608 GSTO1P78417 241 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 TTF1Q15361 905 aaPredicted RBP17.32■□□□□ 0.36
ABCF3-209ENST00000472608 TREML2Q5T2D2 321 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 ANKRD45Q5TZF3 282 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 DZIP1Q86YF9 867 aaKnown RBP17.32■□□□□ 0.36
ABCF3-209ENST00000472608 GPATCH3Q96I76 525 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 ECHDC1Q9NTX5 307 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 PHIPQ8WWQ0 1821 aa17.32■□□□□ 0.36
ABCF3-209ENST00000472608 DDX60LQ5H9U9 1706 aaKnown RBP17.32■□□□□ 0.36
ABCF3-209ENST00000472608 TTC28Q96AY4 2481 aa17.31■□□□□ 0.36
ABCF3-209ENST00000472608 RGS3P49796 1198 aa17.31■□□□□ 0.36
ABCF3-209ENST00000472608 MECOMQ03112 1051 aa17.31■□□□□ 0.36
ABCF3-209ENST00000472608 TBC1D9Q6ZT07 1266 aa17.31■□□□□ 0.36
ABCF3-209ENST00000472608 PROCA1Q8NCQ7 364 aaPredicted RBP17.31■□□□□ 0.36
ABCF3-209ENST00000472608 NSUN4Q96CB9 384 aaKnown RBP17.31■□□□□ 0.36
ABCF3-209ENST00000472608 TTC41PQ6P2S7 1318 aa17.3■□□□□ 0.36
ABCF3-209ENST00000472608 TRIM75PA6NK02 468 aa17.3■□□□□ 0.36
ABCF3-209ENST00000472608 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
ABCF3-209ENST00000472608 TRIB2Q92519 343 aa17.3■□□□□ 0.36
ABCF3-209ENST00000472608 HAUS7Q99871 368 aa17.3■□□□□ 0.36
ABCF3-209ENST00000472608 PRDM6Q9NQX0 595 aa17.3■□□□□ 0.36
ABCF3-209ENST00000472608 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
ABCF3-209ENST00000472608 PRUNE2Q8WUY3 3088 aa17.3■□□□□ 0.36
ABCF3-209ENST00000472608 DOCK2Q92608 1830 aa17.29■□□□□ 0.36
ABCF3-209ENST00000472608 ZNF384Q8TF68 577 aa17.29■□□□□ 0.36
ABCF3-209ENST00000472608 MORF4L1Q9UBU8 362 aa17.29■□□□□ 0.36
ABCF3-209ENST00000472608 MUC3AQ02505 3323 aa17.29■□□□□ 0.36
ABCF3-209ENST00000472608 MROH7-TTC4A0A0A0MT08 1334 aa17.28■□□□□ 0.36
ABCF3-209ENST00000472608 SALL3Q9BXA9 1300 aa17.28■□□□□ 0.36
ABCF3-209ENST00000472608 GPR75-ASB3A0A0A6YYF3 556 aa17.28■□□□□ 0.36
ABCF3-209ENST00000472608 DDTLA6NHG4 134 aaPredicted RBP17.28■□□□□ 0.36
ABCF3-209ENST00000472608 TBC1D12O60347 775 aa17.28■□□□□ 0.36
ABCF3-209ENST00000472608 XRCC5P13010 732 aaKnown RBP17.28■□□□□ 0.36
ABCF3-209ENST00000472608 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
ABCF3-209ENST00000472608 BOLA2Q9H3K6 86 aa17.28■□□□□ 0.36
ABCF3-209ENST00000472608 PIH1D3Q9NQM4 214 aaKnown RBP17.28■□□□□ 0.36
ABCF3-209ENST00000472608 DOCK1Q14185 1865 aa17.28■□□□□ 0.36
ABCF3-209ENST00000472608 MYH2Q9UKX2 1941 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 PLXNB2O15031 1838 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 ERC2O15083 957 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 SLURP2P0DP57 97 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 NUCB1Q02818 461 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 LRRC26Q2I0M4 334 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 LHX8Q68G74 356 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-209ENST00000472608 CCDC84Q86UT8 332 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-209ENST00000472608 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 BCL11AQ9H165 835 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 ANTXR1Q9H6X2 564 aa17.27■□□□□ 0.36
ABCF3-209ENST00000472608 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-209ENST00000472608 DNAH12Q6ZR08 3092 aa17.26■□□□□ 0.35
ABCF3-209ENST00000472608 GLRX3O76003 335 aaKnown RBP17.26■□□□□ 0.35
ABCF3-209ENST00000472608 PPP4CP60510 307 aa17.26■□□□□ 0.35
ABCF3-209ENST00000472608 MDM2Q00987 491 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-209ENST00000472608 PABPC4Q13310 644 aaKnown RBP eCLIP17.26■□□□□ 0.35
ABCF3-209ENST00000472608 SH3D19Q5HYK7 790 aa17.26■□□□□ 0.35
ABCF3-209ENST00000472608 CHD1LQ86WJ1 897 aa17.26■□□□□ 0.35
ABCF3-209ENST00000472608 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
ABCF3-209ENST00000472608 PAG1Q9NWQ8 432 aa17.26■□□□□ 0.35
ABCF3-209ENST00000472608 CDH23Q9H251 3354 aa17.26■□□□□ 0.35
ABCF3-209ENST00000472608 GOLIM4O00461 696 aa17.25■□□□□ 0.35
ABCF3-209ENST00000472608 IDH1O75874 414 aaKnown RBP17.25■□□□□ 0.35
ABCF3-209ENST00000472608 PRKAR2AP13861 404 aaKnown RBP17.25■□□□□ 0.35
ABCF3-209ENST00000472608 MX1P20591 662 aa17.25■□□□□ 0.35
ABCF3-209ENST00000472608 SPP2Q13103 211 aa17.25■□□□□ 0.35
ABCF3-209ENST00000472608 CERS3Q8IU89 383 aa17.25■□□□□ 0.35
ABCF3-209ENST00000472608 ZSCAN29Q8IWY8 852 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-209ENST00000472608 TRMT44Q8IYL2 757 aaKnown RBP17.25■□□□□ 0.35
ABCF3-209ENST00000472608 ZNF280CQ8ND82 737 aa17.25■□□□□ 0.35
ABCF3-209ENST00000472608 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms