RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 CRBNQ96SW2 442 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 SEMA6BQ9H3T3 888 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 FBRSQ9HAH7 460 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 C1GALT1Q9NS00 363 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 ATG3Q9NT62 314 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 GINM1Q9NU53 330 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 TJP2Q9UDY2 1190 aa7.46□□□□□ -1.22
CDHR3-208ENST00000471910 CST3P01034 146 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-208ENST00000471910 ARID5AQ03989 594 aa7.45□□□□□ -1.22
CDHR3-208ENST00000471910 CLCQ05315 142 aa7.45□□□□□ -1.22
CDHR3-208ENST00000471910 SLBPQ14493 270 aaKnown RBP eCLIP7.45□□□□□ -1.22
CDHR3-208ENST00000471910 CYP27C1Q4G0S4 372 aa7.45□□□□□ -1.22
CDHR3-208ENST00000471910 ARMCX6Q7L4S7 300 aa7.45□□□□□ -1.22
CDHR3-208ENST00000471910 FBXL6Q8N531 539 aa7.45□□□□□ -1.22
CDHR3-208ENST00000471910 ACSF2Q96CM8 615 aaPredicted RBP7.45□□□□□ -1.22
CDHR3-208ENST00000471910 C8orf37Q96NL8 207 aa7.45□□□□□ -1.22
CDHR3-208ENST00000471910 KLHL3Q9UH77 587 aa7.45□□□□□ -1.22
CDHR3-208ENST00000471910 DYNC1LI2O43237 492 aaPredicted RBP7.44□□□□□ -1.22
CDHR3-208ENST00000471910 SOX9P48436 509 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 NASPP49321 788 aaPredicted RBP7.44□□□□□ -1.22
CDHR3-208ENST00000471910 CDK5R2Q13319 367 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 NKG7Q16617 165 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 NAALADL2Q58DX5 795 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 PRAMEF13Q5VWM6 474 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 OGFOD3Q6PK18 319 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 TINF2Q9BSI4 451 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 METTL22Q9BUU2 404 aaPredicted RBP7.44□□□□□ -1.22
CDHR3-208ENST00000471910 OSBPL1AQ9BXW6 950 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 PRDM10Q9NQV6 1147 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 GMIPQ9P107 970 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 STRIP2Q9ULQ0 834 aa7.44□□□□□ -1.22
CDHR3-208ENST00000471910 WDR64B1ANS9 1081 aa7.43□□□□□ -1.22
CDHR3-208ENST00000471910 ATF4P18848 351 aaPredicted RBP7.43□□□□□ -1.22
CDHR3-208ENST00000471910 CHMP4BP1P59074 171 aa7.43□□□□□ -1.22
CDHR3-208ENST00000471910 UBE3DQ7Z6J8 389 aa7.43□□□□□ -1.22
CDHR3-208ENST00000471910 SLC22A31A6NKX4 558 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 SSBP05455 408 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDHR3-208ENST00000471910 FAM87AP0C7U9 286 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 DNAJA1P31689 397 aaKnown RBP7.42□□□□□ -1.22
CDHR3-208ENST00000471910 CPSF6Q16630 551 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDHR3-208ENST00000471910 ZNF746Q6NUN9 644 aaPredicted RBP7.42□□□□□ -1.22
CDHR3-208ENST00000471910 PHACTR4Q8IZ21 702 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 TOP6BLQ8N6T0 577 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 SHKBP1Q8TBC3 707 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 XAGE3Q8WTP9 111 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 PSMG3-AS1Q96PY0 264 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 MIPEPQ99797 713 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDHR3-208ENST00000471910 SRRTQ9BXP5 876 aaKnown RBP7.42□□□□□ -1.22
CDHR3-208ENST00000471910 ZNRF3Q9ULT6 936 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 PPT2Q9UMR5 302 aa7.42□□□□□ -1.22
CDHR3-208ENST00000471910 UPK3BL1B0FP48 263 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 CHURC1-FNTBB4DL54 471 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 UPK3BL2E5RIL1 263 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 K7ELQ4 463 aaPredicted RBP7.41□□□□□ -1.22
CDHR3-208ENST00000471910 F13BP05160 661 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 RAG1P15918 1043 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 ADMP35318 185 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 EIF6P56537 245 aaKnown RBP7.41□□□□□ -1.22
CDHR3-208ENST00000471910 PRSS36Q5K4E3 855 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 SLFN12Q8IYM2 578 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 CCDC74BQ96LY2 380 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 DPH2Q9BQC3 489 aaPredicted RBP7.41□□□□□ -1.22
CDHR3-208ENST00000471910 DUSP23Q9BVJ7 150 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 GTF2IRD1Q9UHL9 959 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 LEMD3Q9Y2U8 911 aa7.41□□□□□ -1.22
CDHR3-208ENST00000471910 CYP7A1P22680 504 aa7.4□□□□□ -1.22
CDHR3-208ENST00000471910 GBP1P32455 592 aa7.4□□□□□ -1.22
CDHR3-208ENST00000471910 ARSHQ5FYA8 562 aa7.4□□□□□ -1.22
CDHR3-208ENST00000471910 LETMD1Q6P1Q0 360 aa7.4□□□□□ -1.22
CDHR3-208ENST00000471910 RBBP8NLQ8NC74 664 aaPredicted RBP7.4□□□□□ -1.22
CDHR3-208ENST00000471910 OR6P1Q8NGX9 317 aa7.4□□□□□ -1.22
CDHR3-208ENST00000471910 CYB5D2Q8WUJ1 264 aa7.4□□□□□ -1.22
CDHR3-208ENST00000471910 TMEM40Q8WWA1 233 aa7.4□□□□□ -1.22
CDHR3-208ENST00000471910 GATA6Q92908 595 aa7.4□□□□□ -1.22
CDHR3-208ENST00000471910 TPX2Q9ULW0 747 aaKnown RBP7.4□□□□□ -1.22
CDHR3-208ENST00000471910 FAM170BA6NMN3 283 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 MEIS3P2A8K0S8 358 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 CDCP2Q5VXM1 449 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 OVOS1Q6IE37 1185 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 ARHGAP27Q6ZUM4 889 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 NLRC3Q7RTR2 1065 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 ATG4CQ96DT6 458 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 GMLQ99445 158 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
CDHR3-208ENST00000471910 LEFTY1O75610 366 aa7.38□□□□□ -1.23
CDHR3-208ENST00000471910 SLITRK5O94991 958 aa7.38□□□□□ -1.23
CDHR3-208ENST00000471910 ETV3P41162 512 aa7.38□□□□□ -1.23
CDHR3-208ENST00000471910 CCDC81Q6ZN84 652 aa7.38□□□□□ -1.23
CDHR3-208ENST00000471910 ZNF765Q7L2R6 523 aa7.38□□□□□ -1.23
CDHR3-208ENST00000471910 TM9SF2Q99805 663 aa7.38□□□□□ -1.23
CDHR3-208ENST00000471910 CNNM2Q9H8M5 875 aa7.38□□□□□ -1.23
CDHR3-208ENST00000471910 PIM2Q9P1W9 311 aa7.38□□□□□ -1.23
CDHR3-208ENST00000471910 RGS13O14921 159 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 DNAJA2O60884 412 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 NME1P15531 152 aaKnown RBP7.37□□□□□ -1.23
CDHR3-208ENST00000471910 GRIK1P39086 918 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 CCNFP41002 786 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 GIPRP48546 466 aa7.37□□□□□ -1.23
CDHR3-208ENST00000471910 INTS3Q68E01 1043 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms