RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 FXR2P51116 673 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP48-207ENST00000471752 NBPF11Q86T75 865 aa9.87□□□□□ -0.83
USP48-207ENST00000471752 RBPJLQ9UBG7 517 aa9.87□□□□□ -0.83
USP48-207ENST00000471752 BIN2Q9UBW5 565 aaPredicted RBP9.87□□□□□ -0.83
USP48-207ENST00000471752 A0A0C4DFX4 3053 aa9.87□□□□□ -0.83
USP48-207ENST00000471752 LAMA3Q16787 3333 aa9.87□□□□□ -0.83
USP48-207ENST00000471752 CYP2D7A0A087X1C5 515 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 TCRBV5S4A2TA0A5A2 114 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 GOLIM4O00461 696 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 ADCY3O60266 1144 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 BAG3O95817 575 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 MAP4K4O95819 1239 aaPredicted RBP9.86□□□□□ -0.83
USP48-207ENST00000471752 GH2P01242 217 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 PDE6AP16499 860 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 SHMT1P34896 483 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 FCGRTP55899 365 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 BACE1P56817 501 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 ZYXQ15942 572 aaKnown RBP9.86□□□□□ -0.83
USP48-207ENST00000471752 SH3D19Q5HYK7 790 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 KIAA1755Q5JYT7 1200 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 UBE2Q1Q7Z7E8 422 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 FOXP4Q8IVH2 680 aaPredicted RBP9.86□□□□□ -0.83
USP48-207ENST00000471752 SMCR8Q8TEV9 937 aaPredicted RBP9.86□□□□□ -0.83
USP48-207ENST00000471752 DYNLL2Q96FJ2 89 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 DNAJC2Q99543 621 aaKnown RBP9.86□□□□□ -0.83
USP48-207ENST00000471752 WDR18Q9BV38 432 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 RNF208Q9H0X6 261 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 BOLA2Q9H3K6 86 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 RCAN3Q9UKA8 241 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 TAOK2Q9UL54 1235 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 ZBTB21Q9ULJ3 1066 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 SLC45A1Q9Y2W3 748 aa9.86□□□□□ -0.83
USP48-207ENST00000471752 LAMA2P24043 3122 aaKnown RBP9.86□□□□□ -0.83
USP48-207ENST00000471752 DOCK3Q8IZD9 2030 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 ZNF532Q9HCE3 1301 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 DOCK2Q92608 1830 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 CNMDO75829 334 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 GNRH1P01148 92 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 INHAP05111 366 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 ARHGEF6Q15052 776 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 HABP4Q5JVS0 413 aaKnown RBP9.85□□□□□ -0.83
USP48-207ENST00000471752 SLC9C2Q5TAH2 1124 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 TSHZ3Q63HK5 1081 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 CLEC10AQ8IUN9 316 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 LCORLQ8N3X6 602 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 PROCA1Q8NCQ7 364 aaPredicted RBP9.85□□□□□ -0.83
USP48-207ENST00000471752 SLC44A5Q8NCS7 719 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 SP7Q8TDD2 431 aaPredicted RBP9.85□□□□□ -0.83
USP48-207ENST00000471752 SDR42E1Q8WUS8 393 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 NOL10Q9BSC4 688 aaKnown RBP9.85□□□□□ -0.83
USP48-207ENST00000471752 PORCNQ9H237 461 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 DHX36Q9H2U1 1008 aaKnown RBP9.85□□□□□ -0.83
USP48-207ENST00000471752 ARMT1Q9H993 441 aa9.85□□□□□ -0.83
USP48-207ENST00000471752 HERC5Q9UII4 1024 aaKnown RBP9.85□□□□□ -0.83
USP48-207ENST00000471752 COLQQ9Y215 455 aaPredicted RBP9.85□□□□□ -0.83
USP48-207ENST00000471752 COL2A1P02458 1487 aaPredicted RBP9.85□□□□□ -0.83
USP48-207ENST00000471752 A0A1W2PRG0 241 aa9.84□□□□□ -0.83
USP48-207ENST00000471752 TNPO2O14787 897 aaKnown RBP9.84□□□□□ -0.83
USP48-207ENST00000471752 USP5P45974 858 aa9.84□□□□□ -0.83
USP48-207ENST00000471752 PRMT2P55345 433 aa9.84□□□□□ -0.83
USP48-207ENST00000471752 TATDN1Q6P1N9 297 aa9.84□□□□□ -0.83
USP48-207ENST00000471752 SIAH1Q8IUQ4 282 aa9.84□□□□□ -0.83
USP48-207ENST00000471752 RPAP2Q8IXW5 612 aaPredicted RBP9.84□□□□□ -0.83
USP48-207ENST00000471752 CRACR2BQ8N4Y2 399 aaPredicted RBP9.84□□□□□ -0.83
USP48-207ENST00000471752 DIS3LQ8TF46 1054 aaKnown RBP9.84□□□□□ -0.83
USP48-207ENST00000471752 U2AF1L4Q8WU68 220 aaKnown RBP9.84□□□□□ -0.83
USP48-207ENST00000471752 DEFB118Q96PH6 123 aa9.84□□□□□ -0.83
USP48-207ENST00000471752 MAGEB6P1A0A0J9YX57 407 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 USP17L10C9JJH3 530 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 GJB1P08034 283 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 PLCG2P16885 1265 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 CYP2B6P20813 491 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 HOXD10P28358 340 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 HOXA7P31268 230 aaPredicted RBP9.83□□□□□ -0.84
USP48-207ENST00000471752 GJA8P48165 433 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 MNX1P50219 401 aaPredicted RBP9.83□□□□□ -0.84
USP48-207ENST00000471752 HERVK_113P62684 666 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 GABPAQ06546 454 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 SEPT2Q15019 361 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 RAB3GAP1Q15042 981 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 CCL14Q16627 93 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 FAM110CQ1W6H9 321 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 PTPRFP10586 1907 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 DOCK1Q14185 1865 aa9.83□□□□□ -0.84
USP48-207ENST00000471752 SGPL1O95470 568 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 ASNSP08243 561 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 IFIT2P09913 472 aaKnown RBP9.82□□□□□ -0.84
USP48-207ENST00000471752 MAP3K12Q12852 859 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 CERKLQ49MI3 558 aaPredicted RBP9.82□□□□□ -0.84
USP48-207ENST00000471752 ERC1Q8IUD2 1116 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 OTUD7AQ8TE49 926 aaPredicted RBP9.82□□□□□ -0.84
USP48-207ENST00000471752 TRIB2Q92519 343 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 KIF1BPQ96EK5 621 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 PAGR1Q9BTK6 254 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 DCP1AQ9NPI6 582 aaPredicted RBP9.82□□□□□ -0.84
USP48-207ENST00000471752 BTBD7Q9P203 1132 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 MORF4L1Q9UBU8 362 aa9.82□□□□□ -0.84
USP48-207ENST00000471752 MBD4O95243 580 aa9.81□□□□□ -0.84
USP48-207ENST00000471752 TFRCP02786 760 aaKnown RBP9.81□□□□□ -0.84
USP48-207ENST00000471752 IRF5Q13568 498 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms