RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 LCA5Q86VQ0 697 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TAB3Q8N5C8 712 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 UBL4BQ8N7F7 174 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CALUO43852 315 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 OCM2P0CE71 109 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 OCMP0CE72 109 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CPA1P15085 419 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 RILPL1Q5EBL4 403 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 HERC4Q5GLZ8 1057 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NELFCDQ8IXH7 590 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 VCXQ9H320 206 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CETN3O15182 167 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CAVIN2O95810 425 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 HIBADHP31937 336 aaKnown RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 HACE1Q8IYU2 909 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 RYBPQ8N488 228 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ZNF653Q96CK0 615 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ZNF594Q96JF6 807 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CREB3L3Q68CJ9 461 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 MCUR1Q96AQ8 359 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ARID4AP29374 1257 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CAPN12Q6ZSI9 719 aa14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 MAGED2Q9UNF1 606 aaPredicted RBP14.68□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 APBA3O96018 575 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 IVLP07476 585 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NIM1KQ8IY84 436 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 C10orf67Q8IYJ2 551 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 VCX3BQ9H321 246 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 KRT15P19012 456 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ZBTB41Q5SVQ8 909 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 SRGAP1Q7Z6B7 1085 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 FNDC3AQ9Y2H6 1198 aaKnown RBP14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 HNRNPCL2B2RXH8 293 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 HNRNPCL1O60812 293 aaKnown RBP14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 AK2P54819 239 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 GBP6Q6ZN66 633 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CTAGE3PQ8IX95 158 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 OLA1Q9NTK5 396 aaKnown RBP14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 V9GY48 417 aaPredicted RBP14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 IFNB1P01574 187 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 MORC4Q8TE76 937 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 EXOC3O60645 756 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 HECW1Q76N89 1606 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 IL1RL1Q01638 556 aa14.67□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 KIF22Q14807 665 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CCDC62Q6P9F0 684 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 FAM76AQ8TAV0 307 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 SUGCTQ9HAC7 445 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 MLXIPQ9HAP2 919 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PPIP5K2O43314 1243 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NR1I2O75469 434 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 SYF2O95926 243 aaKnown RBP14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 F13A1P00488 732 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ITGA6P23229 1130 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 KRT81Q14533 505 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 HAUS3Q68CZ6 603 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 RNF217Q8TC41 542 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 STAMQ92783 540 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CTTNBP2NLQ9P2B4 639 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CALCRLQ16602 461 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 AKR1B15C9JRZ8 316 aaPredicted RBP14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ARHGEF16Q5VV41 709 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CNNM4Q6P4Q7 775 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 KLHL7Q8IXQ5 586 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CSGALNACT2Q8N6G5 542 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 C8orf58Q8NAV2 365 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TGFBRAP1Q8WUH2 860 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 VPS41P49754 854 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CFAP36Q96G28 342 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 MYL10Q9BUA6 226 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 DNM3Q9UQ16 869 aa14.66□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ABCC5O15440 1437 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ACTN4O43707 911 aaKnown RBP14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ATP5DP30049 168 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CASP2P42575 452 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 DENND2AQ9ULE3 1009 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CDK13Q14004 1512 aaKnown RBP14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PALM3A6NDB9 673 aaPredicted RBP14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 KRT24Q2M2I5 525 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 MAPKAPK5Q8IW41 473 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 SCYL1Q96KG9 808 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 EXOC7Q9UPT5 735 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 DPY19L2Q6NUT2 758 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 ZBTB33Q86T24 672 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 CCDC105Q8IYK2 499 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NDUFB9Q9Y6M9 179 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 FAM102BQ5T8I3 360 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 RBM46Q8TBY0 533 aaKnown RBP14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PHKBQ93100 1093 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 SUDS3Q9H7L9 328 aaPredicted RBP14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 PCDHB13Q9Y5F0 798 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 AKAP4Q5JQC9 854 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 HHATQ5VTY9 493 aa14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 NCOA5Q9HCD5 579 aaKnown RBP14.65□□□□□ -0.06
NPHP3-ACAD11-201ENST00000471702 TBC1D10BQ4KMP7 808 aaPredicted RBP14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 SNX29Q8TEQ0 813 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 IGSF22Q8N9C0 903 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 RSAD2Q8WXG1 361 aa14.64□□□□□ -0.07
NPHP3-ACAD11-201ENST00000471702 I3L4J1 428 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms