RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 CT47B1P0C2W7 299 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-211ENST00000471455 CYP2C8P10632 490 aa11.3□□□□□ -0.6
CPSF4-211ENST00000471455 RGS3P49796 1198 aa11.3□□□□□ -0.6
CPSF4-211ENST00000471455 GADL1Q6ZQY3 521 aa11.3□□□□□ -0.6
CPSF4-211ENST00000471455 API5Q9BZZ5 524 aaKnown RBP11.3□□□□□ -0.6
CPSF4-211ENST00000471455 GAKO14976 1311 aa11.3□□□□□ -0.6
CPSF4-211ENST00000471455 ATRNL1Q5VV63 1379 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 ADCY3O60266 1144 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 CTNND1O60716 968 aaKnown RBP11.29□□□□□ -0.6
CPSF4-211ENST00000471455 MAP4K4O95819 1239 aaPredicted RBP11.29□□□□□ -0.6
CPSF4-211ENST00000471455 PTPRAP18433 802 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 CTGFP29279 349 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 PHKA1P46020 1223 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 IRF5Q13568 498 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 MOGSQ13724 837 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 MVPQ14764 893 aaKnown RBP11.29□□□□□ -0.6
CPSF4-211ENST00000471455 PROX2Q3B8N5 592 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 GPAT2Q6NUI2 795 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 PXYLP1Q8TE99 480 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 U2AF1L4Q8WU68 220 aaKnown RBP11.29□□□□□ -0.6
CPSF4-211ENST00000471455 COA7Q96BR5 231 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 TBC1D2Q9BYX2 928 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 CDHR5Q9HBB8 845 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 AKAP2Q9Y2D5 859 aa11.29□□□□□ -0.6
CPSF4-211ENST00000471455 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 DOCK1Q14185 1865 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 PHF20L1A8MW92 1017 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 GSTO1P78417 241 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 PABPC4Q13310 644 aaKnown RBP eCLIP11.28□□□□□ -0.6
CPSF4-211ENST00000471455 CCDC102BQ68D86 513 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 ABCF2Q9UG63 623 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 AGTPBP1Q9UPW5 1226 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 AFG3L2Q9Y4W6 797 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 MYH2Q9UKX2 1941 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 MROH7-TTC4A0A0A0MT08 1334 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 BRCA2P51587 3418 aa11.28□□□□□ -0.6
CPSF4-211ENST00000471455 MGAMO43451 1857 aa11.27□□□□□ -0.6
CPSF4-211ENST00000471455 A0A1W2PPC1 479 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 TRIM75PA6NK02 468 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 BHMG1C9JSJ3 638 aaPredicted RBP11.27□□□□□ -0.61
CPSF4-211ENST00000471455 SGPL1O95470 568 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 INHAP05111 366 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 BTDP43251 543 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 FLT3LGP49771 235 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 MAP3K10Q02779 954 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 SLFN5Q08AF3 891 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 PICALMQ13492 652 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 RASGRF1Q13972 1273 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 ERICH6Q7L0X2 663 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 UBE2Q1Q7Z7E8 422 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 RNF166Q96A37 237 aaPredicted RBP11.27□□□□□ -0.61
CPSF4-211ENST00000471455 UNC93B1Q9H1C4 597 aa11.27□□□□□ -0.61
CPSF4-211ENST00000471455 MAP3K7O43318 606 aa11.26□□□□□ -0.61
CPSF4-211ENST00000471455 TFRCP02786 760 aaKnown RBP11.26□□□□□ -0.61
CPSF4-211ENST00000471455 LDHCP07864 332 aa11.26□□□□□ -0.61
CPSF4-211ENST00000471455 GNAI3P08754 354 aa11.26□□□□□ -0.61
CPSF4-211ENST00000471455 GCLCP48506 637 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-211ENST00000471455 FAM110CQ1W6H9 321 aa11.26□□□□□ -0.61
CPSF4-211ENST00000471455 ZFPM1Q8IX07 1006 aa11.26□□□□□ -0.61
CPSF4-211ENST00000471455 PROCA1Q8NCQ7 364 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-211ENST00000471455 NOL10Q9BSC4 688 aaKnown RBP11.26□□□□□ -0.61
CPSF4-211ENST00000471455 OSBPL5Q9H0X9 879 aaPredicted RBP11.26□□□□□ -0.61
CPSF4-211ENST00000471455 RBM27Q9P2N5 1060 aaKnown RBP11.26□□□□□ -0.61
CPSF4-211ENST00000471455 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
CPSF4-211ENST00000471455 GPR75-ASB3A0A0A6YYF3 556 aa11.25□□□□□ -0.61
CPSF4-211ENST00000471455 ZBTB7BO15156 539 aaPredicted RBP11.25□□□□□ -0.61
CPSF4-211ENST00000471455 ADORA1P30542 326 aa11.25□□□□□ -0.61
CPSF4-211ENST00000471455 GORABQ5T7V8 394 aa11.25□□□□□ -0.61
CPSF4-211ENST00000471455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.25□□□□□ -0.616e-7■■□□□ 14.2
CPSF4-211ENST00000471455 AS3MTQ9HBK9 375 aa11.25□□□□□ -0.61
CPSF4-211ENST00000471455 GABRQQ9UN88 632 aa11.25□□□□□ -0.61
CPSF4-211ENST00000471455 PTPRFP10586 1907 aa11.25□□□□□ -0.61
CPSF4-211ENST00000471455 A0A1B0GUL7 405 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 DDTLA6NHG4 134 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-211ENST00000471455 SRGAP3O43295 1099 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 HMGCRP04035 888 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 ELNP15502 786 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 MECOMQ03112 1051 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 ANKRD13CQ8N6S4 541 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 ANKLE1Q8NAG6 615 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 ZNF280CQ8ND82 737 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 DEFB118Q96PH6 123 aa11.24□□□□□ -0.61
CPSF4-211ENST00000471455 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
CPSF4-211ENST00000471455 HERC5Q9UII4 1024 aaKnown RBP11.24□□□□□ -0.61
CPSF4-211ENST00000471455 NOB1Q9ULX3 412 aaKnown RBP11.24□□□□□ -0.61
CPSF4-211ENST00000471455 PA2G4Q9UQ80 394 aaKnown RBP11.24□□□□□ -0.61
CPSF4-211ENST00000471455 NECAB2Q7Z6G3 386 aa11.23□□□□□ -0.61
CPSF4-211ENST00000471455 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.23□□□□□ -0.61
CPSF4-211ENST00000471455 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
CPSF4-211ENST00000471455 USP17L5A8MUK1 530 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 LOC285556D6RIA3 1793 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 IGSF3O75054 1194 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 BAG3O95817 575 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 UQCRFS1P1P0C7P4 283 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 RHBDL3P58872 404 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 TIMM10P62072 90 aa11.22□□□□□ -0.61
CPSF4-211ENST00000471455 TFCP2Q12800 502 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms