RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.65■□□□□ 0.58
COL1A1-203ENST00000471344 PEX10O60683 326 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 ASNSP08243 561 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 PLCD1P51178 756 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 FCGRTP55899 365 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 TTF1Q15361 905 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-203ENST00000471344 SH3D19Q5HYK7 790 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 NBPF11Q86T75 865 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 LCORLQ8N3X6 602 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 WDR18Q9BV38 432 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 CHMP4BQ9H444 224 aaKnown RBP18.64■□□□□ 0.57
COL1A1-203ENST00000471344 PAG1Q9NWQ8 432 aa18.64■□□□□ 0.57
COL1A1-203ENST00000471344 MYH7P12883 1935 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 GH2P01242 217 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 ATP5JP18859 108 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 PRMT2P55345 433 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 BACE1P56817 501 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 RAET1EQ8TD07 263 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 TBC1D2Q9BYX2 928 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 LRRCC1Q9C099 1032 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 ASCC2Q9H1I8 757 aaPredicted RBP18.63■□□□□ 0.57
COL1A1-203ENST00000471344 AS3MTQ9HBK9 375 aa18.63■□□□□ 0.57
COL1A1-203ENST00000471344 CERS3Q8IU89 383 aa18.62■□□□□ 0.57
COL1A1-203ENST00000471344 HAUS7Q99871 368 aa18.62■□□□□ 0.57
COL1A1-203ENST00000471344 TMEM106CQ9BVX2 250 aa18.62■□□□□ 0.57
COL1A1-203ENST00000471344 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
COL1A1-203ENST00000471344 SERPINB13Q9UIV8 391 aa18.62■□□□□ 0.57
COL1A1-203ENST00000471344 DOCK3Q8IZD9 2030 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 CYP2D6P10635 497 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 HOXD10P28358 340 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 GRK4P32298 578 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 SHMT1P34896 483 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 TSHZ3Q63HK5 1081 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 TATDN1Q6P1N9 297 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 EHD4Q9H223 541 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 PNMA3Q9UL41 463 aa18.61■□□□□ 0.57
COL1A1-203ENST00000471344 BAZ2AQ9UIF9 1905 aaKnown RBP18.61■□□□□ 0.57
COL1A1-203ENST00000471344 SMIM22K7EJ46 135 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 TNPO2O14787 897 aaKnown RBP18.6■□□□□ 0.57
COL1A1-203ENST00000471344 PRKAB2O43741 272 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 MBD4O95243 580 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 ELNP15502 786 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 ADD2P35612 726 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 FLT3LGP49771 235 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 ZYXQ15942 572 aaKnown RBP18.6■□□□□ 0.57
COL1A1-203ENST00000471344 FAM110CQ1W6H9 321 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 SHISA4Q96DD7 197 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 CRNKL1Q9BZJ0 848 aaKnown RBP18.6■□□□□ 0.57
COL1A1-203ENST00000471344 EMILIN3Q9NT22 766 aa18.6■□□□□ 0.57
COL1A1-203ENST00000471344 PLXNB2O15031 1838 aa18.59■□□□□ 0.57
COL1A1-203ENST00000471344 USP17L10C9JJH3 530 aa18.59■□□□□ 0.57
COL1A1-203ENST00000471344 PRPF38BQ5VTL8 546 aaKnown RBP18.59■□□□□ 0.57
COL1A1-203ENST00000471344 TMED8Q6PL24 325 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-203ENST00000471344 POTEEQ6S8J3 1075 aa18.59■□□□□ 0.57
COL1A1-203ENST00000471344 SLC44A5Q8NCS7 719 aa18.59■□□□□ 0.57
COL1A1-203ENST00000471344 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
COL1A1-203ENST00000471344 MCM9Q9NXL9 1143 aa18.59■□□□□ 0.57
COL1A1-203ENST00000471344 TMOD4Q9NZQ9 345 aa18.59■□□□□ 0.57
COL1A1-203ENST00000471344 PCDHB15Q9Y5E8 787 aa18.59■□□□□ 0.57
COL1A1-203ENST00000471344 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
COL1A1-203ENST00000471344 GUCY1A2P33402 732 aa18.58■□□□□ 0.56
COL1A1-203ENST00000471344 GABPAQ06546 454 aa18.58■□□□□ 0.56
COL1A1-203ENST00000471344 PABPC4Q13310 644 aaKnown RBP eCLIP18.58■□□□□ 0.56
COL1A1-203ENST00000471344 RAB3GAP1Q15042 981 aa18.58■□□□□ 0.56
COL1A1-203ENST00000471344 CERKLQ49MI3 558 aaPredicted RBP18.58■□□□□ 0.56
COL1A1-203ENST00000471344 TTC6Q86TZ1 520 aa18.58■□□□□ 0.56
COL1A1-203ENST00000471344 ACER1Q8TDN7 264 aa18.58■□□□□ 0.56
COL1A1-203ENST00000471344 P2RX7Q99572 595 aaKnown RBP18.58■□□□□ 0.56
COL1A1-203ENST00000471344 TXNRD2Q9NNW7 524 aa18.58■□□□□ 0.56
COL1A1-203ENST00000471344 GINM1Q9NU53 330 aa18.58■□□□□ 0.56
COL1A1-203ENST00000471344 CYP2D7A0A087X1C5 515 aa18.57■□□□□ 0.56
COL1A1-203ENST00000471344 ADCY3O60266 1144 aa18.57■□□□□ 0.56
COL1A1-203ENST00000471344 CCL5P13501 91 aa18.57■□□□□ 0.56
COL1A1-203ENST00000471344 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
COL1A1-203ENST00000471344 IRX3P78415 501 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-203ENST00000471344 ABCB5Q2M3G0 1257 aa18.57■□□□□ 0.56
COL1A1-203ENST00000471344 DYNLL2Q96FJ2 89 aa18.57■□□□□ 0.56
COL1A1-203ENST00000471344 DCTPP1Q9H773 170 aa18.57■□□□□ 0.56
COL1A1-203ENST00000471344 BIN2Q9UBW5 565 aaPredicted RBP18.57■□□□□ 0.56
COL1A1-203ENST00000471344 TAOK2Q9UL54 1235 aa18.57■□□□□ 0.56
COL1A1-203ENST00000471344 C19orf81C9J6K1 198 aa18.56■□□□□ 0.56
COL1A1-203ENST00000471344 HOXA7P31268 230 aaPredicted RBP18.56■□□□□ 0.56
COL1A1-203ENST00000471344 GCLCP48506 637 aaPredicted RBP18.56■□□□□ 0.56
COL1A1-203ENST00000471344 HERVK_113P62684 666 aa18.56■□□□□ 0.56
COL1A1-203ENST00000471344 SLAIN1Q8ND83 568 aa18.56■□□□□ 0.56
COL1A1-203ENST00000471344 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
COL1A1-203ENST00000471344 UNC93B1Q9H1C4 597 aa18.56■□□□□ 0.56
COL1A1-203ENST00000471344 MYH8P13535 1937 aa18.55■□□□□ 0.56
COL1A1-203ENST00000471344 INHAP05111 366 aa18.55■□□□□ 0.56
COL1A1-203ENST00000471344 SEPT2Q15019 361 aa18.55■□□□□ 0.56
COL1A1-203ENST00000471344 USP17L2Q6R6M4 530 aa18.55■□□□□ 0.56
COL1A1-203ENST00000471344 CLEC10AQ8IUN9 316 aa18.55■□□□□ 0.56
COL1A1-203ENST00000471344 FEZ1Q99689 392 aa18.55■□□□□ 0.56
COL1A1-203ENST00000471344 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.55■□□□□ 0.56
COL1A1-203ENST00000471344 PUS7LQ9H0K6 701 aaKnown RBP18.55■□□□□ 0.56
COL1A1-203ENST00000471344 ECHDC1Q9NTX5 307 aa18.55■□□□□ 0.56
COL1A1-203ENST00000471344 MORF4L1Q9UBU8 362 aa18.55■□□□□ 0.56
COL1A1-203ENST00000471344 OTUD7AQ8TE49 926 aaPredicted RBP18.54■□□□□ 0.56
COL1A1-203ENST00000471344 COA7Q96BR5 231 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms