RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PPM1HQ9ULR3 514 aa2.72□□□□□ -1.97
UBXN4-207ENST00000471246 SPG7Q9UQ90 795 aa2.72□□□□□ -1.97
UBXN4-207ENST00000471246 DAGLAQ9Y4D2 1042 aa2.72□□□□□ -1.97
UBXN4-207ENST00000471246 PCDHGC5Q9Y5F6 944 aa2.72□□□□□ -1.97
UBXN4-207ENST00000471246 SYNGAP1Q96PV0 1343 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 ENC1O14682 589 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 PAGE1O75459 146 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 LDHBP07195 334 aaKnown RBP2.71□□□□□ -1.98
UBXN4-207ENST00000471246 CELA3AP09093 270 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 USP17L7P0C7H9 530 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 PDIA4P13667 645 aaKnown RBP2.71□□□□□ -1.98
UBXN4-207ENST00000471246 NME2P22392 152 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 HMGA2P52926 109 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 ID3Q02535 119 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 ZP2Q05996 745 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 ZNF252P-AS1Q0IIN9 211 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 MAP1SQ66K74 1059 aaPredicted RBP2.71□□□□□ -1.98
UBXN4-207ENST00000471246 CYFIP1Q7L576 1253 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 FANCD2OSQ96PS1 177 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 GPR20Q99678 358 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 ATXN3LQ9H3M9 355 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 PIDD1Q9HB75 910 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 LGR6Q9HBX8 967 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 C19orf73Q9NVV2 129 aa2.71□□□□□ -1.98
UBXN4-207ENST00000471246 TMEM265A0A087WTH1 108 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 GIPC1O14908 333 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 PRPF40AO75400 957 aaKnown RBP2.7□□□□□ -1.98
UBXN4-207ENST00000471246 CEACAM5P06731 702 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 NEFMP07197 916 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 SLFN14P0C7P3 912 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 SRFP11831 508 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 HCLS1P14317 486 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-207ENST00000471246 ARNTP27540 789 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 GNA15P30679 374 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 OXCT1P55809 520 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 TTLL4Q14679 1199 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 ERICH6BQ5W0A0 696 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 BAHD1Q8TBE0 780 aaPredicted RBP2.7□□□□□ -1.98
UBXN4-207ENST00000471246 GPBAR1Q8TDU6 330 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 ANKRD24Q8TF21 1146 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 ACSBG1Q96GR2 724 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 SLC26A8Q96RN1 970 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 EMILIN2Q9BXX0 1053 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 CEP44Q9C0F1 390 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 CBX8Q9HC52 389 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 DISC1Q9NRI5 854 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 SEMA3GQ9NS98 782 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 FAM8A1Q9UBU6 413 aa2.7□□□□□ -1.98
UBXN4-207ENST00000471246 TTF2Q9UNY4 1162 aaKnown RBP2.7□□□□□ -1.98
UBXN4-207ENST00000471246 ANKRD33BA6NCL7 494 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 MATN3O15232 486 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 TRIM37O94972 964 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 FAM87AP0C7U9 286 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 EIF4BP23588 611 aaKnown RBP2.69□□□□□ -1.98
UBXN4-207ENST00000471246 CDK5R2Q13319 367 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 CRB2Q5IJ48 1285 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 RASIP1Q5U651 963 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 TCERG1LQ5VWI1 586 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 PCNX4Q63HM2 1172 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 LLGL2Q6P1M3 1020 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 HHIPL2Q6UWX4 724 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 MPRIPQ6WCQ1 1025 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 NPAS4Q8IUM7 802 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 SMYD4Q8IYR2 804 aaPredicted RBP2.69□□□□□ -1.98
UBXN4-207ENST00000471246 FEZF2Q8TBJ5 459 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 ISL2Q96A47 359 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 SCAND2PQ9GZW5 306 aaPredicted RBP2.69□□□□□ -1.98
UBXN4-207ENST00000471246 TNKS2Q9H2K2 1166 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 SLITRK6Q9H5Y7 841 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 MKNK2Q9HBH9 465 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 RNF19AQ9NV58 838 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 CACNA2D2Q9NY47 1150 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 SAMM50Q9Y512 469 aa2.69□□□□□ -1.98
UBXN4-207ENST00000471246 GRIN3BO60391 1043 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 RNGTTO60942 597 aaKnown RBP2.68□□□□□ -1.98
UBXN4-207ENST00000471246 SASH1O94885 1247 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 BMP6P22004 513 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 NTF4P34130 210 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 ERVK-24P63145 666 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 IKZF1Q13422 519 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 EAPPQ56P03 285 aaPredicted RBP2.68□□□□□ -1.98
UBXN4-207ENST00000471246 ZC3H12AQ5D1E8 599 aaKnown RBP2.68□□□□□ -1.98
UBXN4-207ENST00000471246 DNAJC14Q6Y2X3 702 aaPredicted RBP2.68□□□□□ -1.98
UBXN4-207ENST00000471246 ZDHHC14Q8IZN3 488 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 RNF214Q8ND24 703 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 GRIN3AQ8TCU5 1115 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 GAL3ST3Q96A11 431 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 FRMD6Q96NE9 622 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 DUSP9Q99956 384 aaKnown RBP2.68□□□□□ -1.98
UBXN4-207ENST00000471246 MRIQ9BWK5 157 aa2.68□□□□□ -1.98
UBXN4-207ENST00000471246 DCDC2CA8MYV0 355 aa2.67□□□□□ -1.98
UBXN4-207ENST00000471246 SLPIP03973 132 aa2.67□□□□□ -1.98
UBXN4-207ENST00000471246 FGD1P98174 961 aa2.67□□□□□ -1.98
UBXN4-207ENST00000471246 PLP2Q04941 152 aa2.67□□□□□ -1.98
UBXN4-207ENST00000471246 LRRC14Q15048 493 aa2.67□□□□□ -1.98
UBXN4-207ENST00000471246 CCDC85BQ15834 202 aaPredicted RBP2.67□□□□□ -1.98
UBXN4-207ENST00000471246 PPM1JQ5JR12 505 aa2.67□□□□□ -1.98
UBXN4-207ENST00000471246 ZBTB37Q5TC79 503 aa2.67□□□□□ -1.98
UBXN4-207ENST00000471246 SCARA3Q6AZY7 606 aa2.67□□□□□ -1.98
UBXN4-207ENST00000471246 SV2BQ7L1I2 683 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 542.8 ms