RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 CYP2C8P10632 490 aa18.91■□□□□ 0.62
HDAC6-218ENST00000470942 HMGCS2P54868 508 aa18.91■□□□□ 0.62
HDAC6-218ENST00000470942 SHROOM1Q2M3G4 852 aaPredicted RBP18.91■□□□□ 0.62
HDAC6-218ENST00000470942 C17orf99Q6UX52 265 aa18.91■□□□□ 0.62
HDAC6-218ENST00000470942 PUS7LQ9H0K6 701 aaKnown RBP18.91■□□□□ 0.62
HDAC6-218ENST00000470942 ATP8A2Q9NTI2 1148 aa18.91■□□□□ 0.62
HDAC6-218ENST00000470942 GINM1Q9NU53 330 aa18.91■□□□□ 0.62
HDAC6-218ENST00000470942 ZBTB21Q9ULJ3 1066 aa18.91■□□□□ 0.62
HDAC6-218ENST00000470942 RNF113AO15541 343 aaKnown RBP18.9■□□□□ 0.62
HDAC6-218ENST00000470942 ECM2O94769 699 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-218ENST00000470942 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
HDAC6-218ENST00000470942 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
HDAC6-218ENST00000470942 PI4K2BQ8TCG2 481 aa18.9■□□□□ 0.62
HDAC6-218ENST00000470942 DDRGK1Q96HY6 314 aa18.9■□□□□ 0.62
HDAC6-218ENST00000470942 WDR18Q9BV38 432 aa18.9■□□□□ 0.62
HDAC6-218ENST00000470942 SLC4A4Q9Y6R1 1079 aa18.9■□□□□ 0.62
HDAC6-218ENST00000470942 MYH8P13535 1937 aa18.9■□□□□ 0.62
HDAC6-218ENST00000470942 ZSWIM8A7E2V4 1837 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 GH2P01242 217 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 CYP2D6P10635 497 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 CAP1Q01518 475 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 TREML2Q5T2D2 321 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 AMOTL1Q8IY63 956 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 PROCA1Q8NCQ7 364 aaPredicted RBP18.89■□□□□ 0.61
HDAC6-218ENST00000470942 CABP5Q9NP86 173 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 AGTPBP1Q9UPW5 1226 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 PTPN22Q9Y2R2 807 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 SLC45A1Q9Y2W3 748 aa18.89■□□□□ 0.61
HDAC6-218ENST00000470942 LOC285556D6RIA3 1793 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 ZFYP08048 801 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-218ENST00000470942 SHMT1P34896 483 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 LACTBP83111 547 aaPredicted RBP18.88■□□□□ 0.61
HDAC6-218ENST00000470942 EVX2Q03828 476 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 MTMR2Q13614 643 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 LRRFIP1Q32MZ4 808 aaKnown RBP18.88■□□□□ 0.61
HDAC6-218ENST00000470942 B4GALNT3Q6L9W6 998 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 ARHGAP39Q9C0H5 1083 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 TMOD4Q9NZQ9 345 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 ADGRA2Q96PE1 1338 aa18.88■□□□□ 0.61
HDAC6-218ENST00000470942 USP17L10C9JJH3 530 aa18.87■□□□□ 0.61
HDAC6-218ENST00000470942 BACE1P56817 501 aa18.87■□□□□ 0.61
HDAC6-218ENST00000470942 PABPC4Q13310 644 aaKnown RBP eCLIP18.87■□□□□ 0.61
HDAC6-218ENST00000470942 RAB3GAP1Q15042 981 aa18.87■□□□□ 0.61
HDAC6-218ENST00000470942 SH3D19Q5HYK7 790 aa18.87■□□□□ 0.61
HDAC6-218ENST00000470942 SMCR8Q8TEV9 937 aaPredicted RBP18.87■□□□□ 0.61
HDAC6-218ENST00000470942 APPBP2Q92624 585 aa18.87■□□□□ 0.61
HDAC6-218ENST00000470942 FSD1Q9BTV5 496 aa18.87■□□□□ 0.61
HDAC6-218ENST00000470942 PNMA3Q9UL41 463 aa18.87■□□□□ 0.61
HDAC6-218ENST00000470942 SALL3Q9BXA9 1300 aa18.86■□□□□ 0.61
HDAC6-218ENST00000470942 C19orf81C9J6K1 198 aa18.86■□□□□ 0.61
HDAC6-218ENST00000470942 IGHDP01880 384 aa18.86■□□□□ 0.61
HDAC6-218ENST00000470942 GABPAQ06546 454 aa18.86■□□□□ 0.61
HDAC6-218ENST00000470942 OSBP2Q969R2 916 aa18.86■□□□□ 0.61
HDAC6-218ENST00000470942 DYNLL2Q96FJ2 89 aa18.86■□□□□ 0.61
HDAC6-218ENST00000470942 STRBPQ96SI9 672 aaKnown RBP18.86■□□□□ 0.61
HDAC6-218ENST00000470942 LNPKQ9C0E8 428 aa18.86■□□□□ 0.61
HDAC6-218ENST00000470942 CYP2D7A0A087X1C5 515 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 USP17L12C9JPN9 530 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 USP17L21D6R901 530 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 MPHOSPH10O00566 681 aaKnown RBP18.85■□□□□ 0.61
HDAC6-218ENST00000470942 FMNL1O95466 1100 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-218ENST00000470942 BCRP11274 1271 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 OSBPP22059 807 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 PSMC4P43686 418 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 SOX10P56693 466 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 IRX6P78412 446 aaPredicted RBP18.85■□□□□ 0.61
HDAC6-218ENST00000470942 FEZ1Q99689 392 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 SWAP70Q9UH65 585 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 MGAMO43451 1857 aa18.85■□□□□ 0.61
HDAC6-218ENST00000470942 PDE1AP54750 535 aa18.84■□□□□ 0.61
HDAC6-218ENST00000470942 C12orf60Q5U649 245 aa18.84■□□□□ 0.61
HDAC6-218ENST00000470942 USP17L2Q6R6M4 530 aa18.84■□□□□ 0.61
HDAC6-218ENST00000470942 SMC5Q8IY18 1101 aa18.84■□□□□ 0.61
HDAC6-218ENST00000470942 SLC44A5Q8NCS7 719 aa18.84■□□□□ 0.61
HDAC6-218ENST00000470942 STAP2Q9UGK3 403 aa18.84■□□□□ 0.61
HDAC6-218ENST00000470942 M0R2C6 588 aa18.83■□□□□ 0.6
HDAC6-218ENST00000470942 GPAA1O43292 621 aa18.83■□□□□ 0.6
HDAC6-218ENST00000470942 GNRH1P01148 92 aa18.83■□□□□ 0.6
HDAC6-218ENST00000470942 ZYXQ15942 572 aaKnown RBP18.83■□□□□ 0.6
HDAC6-218ENST00000470942 CTR9Q6PD62 1173 aa18.83■□□□□ 0.6
HDAC6-218ENST00000470942 ASCC2Q9H1I8 757 aaPredicted RBP18.83■□□□□ 0.6
HDAC6-218ENST00000470942 GSG1L2A8MUP6 293 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 APPP05067 770 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 HOXD10P28358 340 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 CTGFP29279 349 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 IRX3P78415 501 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-218ENST00000470942 SEPT2Q15019 361 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 ANKRD13CQ8N6S4 541 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 TRIM47Q96LD4 638 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 EMILIN3Q9NT22 766 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 TAOK2Q9UL54 1235 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 PTCH2Q9Y6C5 1203 aa18.82■□□□□ 0.6
HDAC6-218ENST00000470942 SMIM22K7EJ46 135 aa18.81■□□□□ 0.6
HDAC6-218ENST00000470942 GNAT2P19087 354 aa18.81■□□□□ 0.6
HDAC6-218ENST00000470942 GUCY1A2P33402 732 aa18.81■□□□□ 0.6
HDAC6-218ENST00000470942 CDK8P49336 464 aa18.81■□□□□ 0.6
HDAC6-218ENST00000470942 FCGRTP55899 365 aa18.81■□□□□ 0.6
HDAC6-218ENST00000470942 CHD1LQ86WJ1 897 aa18.81■□□□□ 0.6
HDAC6-218ENST00000470942 ACER1Q8TDN7 264 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms