RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-233ENST00000470710 TBC1D10BQ4KMP7 808 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-233ENST00000470710 RBM26Q5T8P6 1007 aaKnown RBP10.23□□□□□ -0.77
HDLBP-233ENST00000470710 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
HDLBP-233ENST00000470710 ZSCAN29Q8IWY8 852 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-233ENST00000470710 ZNF444Q8N0Y2 327 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-233ENST00000470710 NEDD1Q8NHV4 660 aa10.23□□□□□ -0.77
HDLBP-233ENST00000470710 TRPM4Q8TD43 1214 aa10.23□□□□□ -0.77
HDLBP-233ENST00000470710 ANKS1AQ92625 1134 aa10.23□□□□□ -0.77
HDLBP-233ENST00000470710 CHMP4CQ96CF2 233 aa10.23□□□□□ -0.77
HDLBP-233ENST00000470710 ZSCAN10Q96SZ4 725 aaPredicted RBP10.23□□□□□ -0.77
HDLBP-233ENST00000470710 LARP6Q9BRS8 491 aaKnown RBP10.23□□□□□ -0.77
HDLBP-233ENST00000470710 VEZTQ9HBM0 779 aa10.23□□□□□ -0.77
HDLBP-233ENST00000470710 CDK5RAP2Q96SN8 1893 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 GLTPD2A6NH11 291 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 TSPY2A6NKD2 308 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 TBC1D12O60347 775 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 TSPY3P0CV98 308 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 TSPY8P0CW00 308 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 PDIA3P30101 505 aaKnown RBP10.22□□□□□ -0.77
HDLBP-233ENST00000470710 SHMT1P34896 483 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 DDIT3P35638 169 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 EPS15P42566 896 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 TNNI2P48788 182 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 TFAP4Q01664 338 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 FAM47AQ5JRC9 791 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 APOBEC3FQ8IUX4 373 aaKnown RBP10.22□□□□□ -0.77
HDLBP-233ENST00000470710 ENAHQ8N8S7 591 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-233ENST00000470710 GTF3C6Q969F1 213 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 CCDC17Q96LX7 622 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 CSRNP1Q96S65 589 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 SLKQ9H2G2 1235 aaPredicted RBP10.22□□□□□ -0.77
HDLBP-233ENST00000470710 DNAJC18Q9H819 358 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 CWC22Q9HCG8 908 aaKnown RBP10.22□□□□□ -0.77
HDLBP-233ENST00000470710 ADARB2Q9NS39 739 aaKnown RBP10.22□□□□□ -0.77
HDLBP-233ENST00000470710 PGAP2Q9UHJ9 254 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 HERC5Q9UII4 1024 aaKnown RBP10.22□□□□□ -0.77
HDLBP-233ENST00000470710 BRPF3Q9ULD4 1205 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 TNKSO95271 1327 aa10.22□□□□□ -0.77
HDLBP-233ENST00000470710 UTRNP46939 3433 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 KLF18A0A0U1RQI7 1052 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 NOVP48745 357 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 MAP3K10Q02779 954 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 ST3GAL1Q11201 340 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 RASA3Q14644 834 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 TATDN1Q6P1N9 297 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 APOA5Q6Q788 366 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 NFXL1Q6ZNB6 911 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 DGKHQ86XP1 1220 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 CCDC83Q8IWF9 413 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 CRACR2BQ8N4Y2 399 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-233ENST00000470710 ZKSCAN3Q9BRR0 538 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 TRIM34Q9BYJ4 488 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 TMEM39BQ9GZU3 492 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 SENP2Q9HC62 589 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 HACL1Q9UJ83 578 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-233ENST00000470710 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
HDLBP-233ENST00000470710 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.21□□□□□ -0.77
HDLBP-233ENST00000470710 PITPNM2Q9BZ72 1349 aa10.21□□□□□ -0.78
HDLBP-233ENST00000470710 NID2Q14112 1375 aa10.21□□□□□ -0.78
HDLBP-233ENST00000470710 ECM29Q5VYK3 1845 aa10.21□□□□□ -0.78
HDLBP-233ENST00000470710 IGKV6D-41A0A0C4DH26 115 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 CCDC69A6NI79 296 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 GOLGA8BA8MQT2 603 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 ZBTB43O43298 467 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 ASTN2O75129 1339 aaPredicted RBP10.2□□□□□ -0.78
HDLBP-233ENST00000470710 DDAH1O94760 285 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 MYH1P12882 1939 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 HIRAP54198 1017 aaPredicted RBP10.2□□□□□ -0.78
HDLBP-233ENST00000470710 PPP4R3BQ5MIZ7 849 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 IFIT1BQ5T764 474 aaKnown RBP10.2□□□□□ -0.78
HDLBP-233ENST00000470710 RCSD1Q6JBY9 416 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 SYNE3Q6ZMZ3 975 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 NECAB1Q8N987 351 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 SPRYD3Q8NCJ5 442 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 TEPSINQ96N21 525 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 LLPHQ9BRT6 129 aaKnown RBP10.2□□□□□ -0.78
HDLBP-233ENST00000470710 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.2□□□□□ -0.78
HDLBP-233ENST00000470710 IL17RBQ9NRM6 502 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 PPP2R3BQ9Y5P8 575 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 SLC12A7Q9Y666 1083 aa10.2□□□□□ -0.78
HDLBP-233ENST00000470710 DHX16O60231 1041 aaKnown RBP10.19□□□□□ -0.78
HDLBP-233ENST00000470710 NMT2O60551 498 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 AKR1B1P15121 316 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 SCRN1Q12765 414 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 STK3Q13188 491 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 PPP2R5BQ15173 497 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 ANGEL2Q5VTE6 544 aaKnown RBP10.19□□□□□ -0.78
HDLBP-233ENST00000470710 USP50Q70EL3 339 aaPredicted RBP10.19□□□□□ -0.78
HDLBP-233ENST00000470710 CATIPQ7Z7H3 387 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 ZNF654Q8IZM8 581 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 DEFB129Q9H1M3 183 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.19□□□□□ -0.78
HDLBP-233ENST00000470710 GGA3Q9NZ52 723 aa10.19□□□□□ -0.78
HDLBP-233ENST00000470710 NAP1L2Q9ULW6 460 aaPredicted RBP10.19□□□□□ -0.78
HDLBP-233ENST00000470710 IQCA1LA6NCM1 817 aa10.18□□□□□ -0.78
HDLBP-233ENST00000470710 GOLGA8AA7E2F4 631 aa10.18□□□□□ -0.78
HDLBP-233ENST00000470710 CALM1P0DP23 149 aa10.18□□□□□ -0.78
HDLBP-233ENST00000470710 CALM2P0DP24 149 aa10.18□□□□□ -0.78
HDLBP-233ENST00000470710 CALM3P0DP25 149 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms