RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 ESRRAP11474 423 aaPredicted RBP9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 NOS3P29474 1203 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 IREB2P48200 963 aaKnown RBP9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 NLRP12P59046 1061 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 DOC2BQ14184 412 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 UNC5CLQ8IV45 518 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 UBASH3BQ8TF42 649 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 WFDC12Q8WWY7 111 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 MRPL18Q9H0U6 180 aaKnown RBP9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 ABCB6Q9NP58 842 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 NLRP2Q9NX02 1062 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 SBNO1A3KN83 1393 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 TONSLQ96HA7 1378 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 RGS12O14924 1447 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 ANKARQ7Z5J8 1434 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 ATP7BP35670 1465 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 TULP4Q9NRJ4 1543 aa9.45□□□□□ -0.9
PTP4A1-202ENST00000470661 ANKRD33BA6NCL7 494 aa9.44□□□□□ -0.9
PTP4A1-202ENST00000470661 PCDH1Q08174 1060 aa9.44□□□□□ -0.9
PTP4A1-202ENST00000470661 C19orf57Q0VDD7 668 aa9.44□□□□□ -0.9
PTP4A1-202ENST00000470661 SUZ12Q15022 739 aaKnown RBP9.44□□□□□ -0.9
PTP4A1-202ENST00000470661 GLIS3Q8NEA6 775 aa9.44□□□□□ -0.9
PTP4A1-202ENST00000470661 WNT8BQ93098 351 aa9.44□□□□□ -0.9
PTP4A1-202ENST00000470661 BTG4Q9NY30 223 aa9.44□□□□□ -0.9
PTP4A1-202ENST00000470661 ADGRB2O60241 1585 aa9.44□□□□□ -0.9
PTP4A1-202ENST00000470661 KIF1AQ12756 1690 aa9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 COL22A1Q8NFW1 1626 aaPredicted RBP9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 ATRNO75882 1429 aa9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 F8W735 103 aaPredicted RBP9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 PRPF40BQ6NWY9 871 aaKnown RBP9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 ACAD11Q709F0 780 aa9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 AKTIPQ9H8T0 292 aa9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 OSGEPQ9NPF4 335 aa9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 TPSG1Q9NRR2 321 aa9.43□□□□□ -0.9
PTP4A1-202ENST00000470661 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 TRPM1Q7Z4N2 1603 aa9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 TMEM238LA0A1B0GVL6 79 aa9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 ARL4DP49703 201 aa9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 DUOXA2Q1HG44 320 aa9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 ZNF423Q2M1K9 1284 aa9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 BCO2Q9BYV7 579 aa9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 CLEC4MQ9H2X3 399 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 ZNF576Q9H609 170 aa9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 TRPM3Q9HCF6 1732 aaPredicted RBP9.42□□□□□ -0.9
PTP4A1-202ENST00000470661 ST20-MTHFSA0A0A6YYL1 179 aa9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 FURINP09958 794 aa9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 NXPE4Q6UWF7 544 aa9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 DNAJC14Q6Y2X3 702 aaPredicted RBP9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.98e-7■■■□□ 16.9
PTP4A1-202ENST00000470661 SLC12A5Q9H2X9 1139 aa9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 PRDM11Q9NQV5 511 aa9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 USP35Q9P2H5 1018 aa9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 EP400Q96L91 3159 aa9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 QRICH2Q9H0J4 1663 aa9.41□□□□□ -0.9
PTP4A1-202ENST00000470661 ARHGEF10O15013 1369 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 EIF3AQ14152 1382 aaKnown RBP9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 KIAA0232Q92628 1395 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 EVC2Q86UK5 1308 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 ITPKAP23677 461 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 FCGRTP55899 365 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 ATP2B2Q01814 1243 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 GSTM4Q03013 218 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 KIAA1211Q6ZU35 1233 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 TMEM130Q8N3G9 435 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 MEGF10Q96KG7 1140 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 USP26Q9BXU7 913 aa9.4□□□□□ -0.9
PTP4A1-202ENST00000470661 SLIT2O94813 1529 aa9.4□□□□□ -0.91
PTP4A1-202ENST00000470661 RALGAPBQ86X10 1494 aa9.4□□□□□ -0.91
PTP4A1-202ENST00000470661 POLR3AO14802 1390 aaPredicted RBP9.39□□□□□ -0.91
PTP4A1-202ENST00000470661 LDHBP07195 334 aaKnown RBP9.39□□□□□ -0.91
PTP4A1-202ENST00000470661 FBLN1P23142 703 aa9.39□□□□□ -0.91
PTP4A1-202ENST00000470661 VPS72Q15906 364 aa9.39□□□□□ -0.91
PTP4A1-202ENST00000470661 FBF1Q8TES7 1133 aa9.39□□□□□ -0.91
PTP4A1-202ENST00000470661 ALS2Q96Q42 1657 aa9.39□□□□□ -0.91
PTP4A1-202ENST00000470661 GCP02774 474 aa9.38□□□□□ -0.91
PTP4A1-202ENST00000470661 GLB1P16278 677 aa9.38□□□□□ -0.91
PTP4A1-202ENST00000470661 CCDC27Q2M243 656 aa9.38□□□□□ -0.91
PTP4A1-202ENST00000470661 ALG1LQ6GMV1 187 aa9.38□□□□□ -0.91
PTP4A1-202ENST00000470661 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-202ENST00000470661 SOX17Q9H6I2 414 aaPredicted RBP9.38□□□□□ -0.91
PTP4A1-202ENST00000470661 MARF1Q9Y4F3 1742 aaKnown RBP9.38□□□□□ -0.91
PTP4A1-202ENST00000470661 GLI3P10071 1580 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 B3GALT4O96024 378 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 ZNF157P51786 506 aaPredicted RBP9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 EVA1CP58658 441 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 FAAP100Q0VG06 881 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 DTHD1Q6ZMT9 781 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 NME9Q86XW9 330 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 NPAS4Q8IUM7 802 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 TP53INP1Q96A56 240 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 TESK2Q96S53 571 aa9.37□□□□□ -0.91
PTP4A1-202ENST00000470661 ABCA3Q99758 1704 aa9.36□□□□□ -0.91
PTP4A1-202ENST00000470661 TOPAZ1Q8N9V7 1692 aa9.36□□□□□ -0.91
PTP4A1-202ENST00000470661 DLGAP3O95886 979 aa9.36□□□□□ -0.91
PTP4A1-202ENST00000470661 DEFB132Q7Z7B7 95 aa9.36□□□□□ -0.91
PTP4A1-202ENST00000470661 OSBPL7Q9BZF2 842 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms