RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 UBASH3BQ8TF42 649 aa7.91□□□□□ -1.14
RBM39-227ENST00000470563 THAP3Q8WTV1 239 aaPredicted RBP7.91□□□□□ -1.14
RBM39-227ENST00000470563 SMARCC1Q92922 1105 aaPredicted RBP7.91□□□□□ -1.14
RBM39-227ENST00000470563 TJP2Q9UDY2 1190 aa7.91□□□□□ -1.14
RBM39-227ENST00000470563 ZNF214Q9UL59 606 aaPredicted RBP7.91□□□□□ -1.14
RBM39-227ENST00000470563 PRKAB1Q9Y478 270 aa7.91□□□□□ -1.14
RBM39-227ENST00000470563 SBNO2Q9Y2G9 1366 aa7.91□□□□□ -1.14
RBM39-227ENST00000470563 ANKRD62A6NC57 917 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 WFS1O76024 890 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 SOX4Q06945 474 aaPredicted RBP7.9□□□□□ -1.14
RBM39-227ENST00000470563 ARSHQ5FYA8 562 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 EEPD1Q7L9B9 569 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 KIAA0907Q7Z7F0 614 aaPredicted RBP7.9□□□□□ -1.14
RBM39-227ENST00000470563 C12orf40Q86WS4 652 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 MICAL1Q8TDZ2 1067 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 TMEM87BQ96K49 555 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 DHRS1Q96LJ7 313 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 SLC9A7Q96T83 725 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 NOP53Q9NZM5 478 aaKnown RBP7.9□□□□□ -1.14
RBM39-227ENST00000470563 MKL2Q9ULH7 1088 aa7.9□□□□□ -1.14
RBM39-227ENST00000470563 LTBP3Q9NS15 1303 aa7.89□□□□□ -1.15
RBM39-227ENST00000470563 CST3P01034 146 aaPredicted RBP7.89□□□□□ -1.15
RBM39-227ENST00000470563 ETF1P62495 437 aaKnown RBP7.89□□□□□ -1.15
RBM39-227ENST00000470563 NUTM2GQ5VZR2 741 aa7.89□□□□□ -1.15
RBM39-227ENST00000470563 LARP1BQ659C4 914 aaKnown RBP7.89□□□□□ -1.15
RBM39-227ENST00000470563 LILRB2Q8N423 598 aa7.89□□□□□ -1.15
RBM39-227ENST00000470563 SH3TC2Q8TF17 1288 aa7.89□□□□□ -1.15
RBM39-227ENST00000470563 WHAMMQ8TF30 809 aa7.89□□□□□ -1.15
RBM39-227ENST00000470563 SGSM3Q96HU1 749 aa7.89□□□□□ -1.15
RBM39-227ENST00000470563 DNAJC7Q99615 494 aa7.89□□□□□ -1.15
RBM39-227ENST00000470563 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.88□□□□□ -1.15
RBM39-227ENST00000470563 PRAMEF27A3QJZ7 478 aa7.88□□□□□ -1.15
RBM39-227ENST00000470563 WISP1O95388 367 aa7.88□□□□□ -1.15
RBM39-227ENST00000470563 NAT2P11245 290 aa7.88□□□□□ -1.15
RBM39-227ENST00000470563 PMS1P54277 932 aaKnown RBP7.88□□□□□ -1.15
RBM39-227ENST00000470563 PPM1JQ5JR12 505 aa7.88□□□□□ -1.15
RBM39-227ENST00000470563 MRM1Q6IN84 353 aaKnown RBP7.88□□□□□ -1.15
RBM39-227ENST00000470563 C6orf15Q6UXA7 325 aaPredicted RBP7.88□□□□□ -1.15
RBM39-227ENST00000470563 CYB5D2Q8WUJ1 264 aa7.88□□□□□ -1.15
RBM39-227ENST00000470563 KLHL6Q8WZ60 621 aa7.88□□□□□ -1.15
RBM39-227ENST00000470563 CCDC163A0A0D9SF12 145 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 CHURC1-FNTBB4DL54 471 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 WIPF1O43516 503 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 NEFMP07197 916 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 RAG1P15918 1043 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 TRIM28Q13263 835 aaKnown RBP7.87□□□□□ -1.15
RBM39-227ENST00000470563 SLBPQ14493 270 aaKnown RBP eCLIP7.87□□□□□ -1.15
RBM39-227ENST00000470563 ZYXQ15942 572 aaKnown RBP7.87□□□□□ -1.15
RBM39-227ENST00000470563 PPP2R5EQ16537 467 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 MTERF2Q49AM1 385 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 VHLLQ6RSH7 139 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 TREML4Q6UXN2 200 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 ALYREFQ86V81 257 aaKnown RBP7.87□□□□□ -1.15
RBM39-227ENST00000470563 HOMER1Q86YM7 354 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 FAM13CQ8NE31 585 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 APPBP2Q92624 585 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 PLVAPQ9BX97 442 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.87□□□□□ -1.15
RBM39-227ENST00000470563 SUCOQ9UBS9 1254 aaKnown RBP7.87□□□□□ -1.15
RBM39-227ENST00000470563 ZMYM5Q9UJ78 669 aa7.87□□□□□ -1.15
RBM39-227ENST00000470563 IQCA1LA6NCM1 817 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 F8W735 103 aaPredicted RBP7.86□□□□□ -1.15
RBM39-227ENST00000470563 DDAH1O94760 285 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 SLC7A5Q01650 507 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 ANKRD39Q53RE8 183 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 ZNF662Q6ZS27 426 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 ACAD11Q709F0 780 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 ANKRD13AQ8IZ07 590 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 C2CD4AQ8NCU7 369 aaPredicted RBP7.86□□□□□ -1.15
RBM39-227ENST00000470563 NEDD1Q8NHV4 660 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 LENG1Q96BZ8 264 aaPredicted RBP7.86□□□□□ -1.15
RBM39-227ENST00000470563 CCDC74BQ96LY2 380 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 ST7Q9NRC1 585 aa7.86□□□□□ -1.15
RBM39-227ENST00000470563 SUSD5O60279 629 aa7.85□□□□□ -1.15
RBM39-227ENST00000470563 CDC45O75419 566 aa7.85□□□□□ -1.15
RBM39-227ENST00000470563 LRIG2O94898 1065 aa7.85□□□□□ -1.15
RBM39-227ENST00000470563 UVSSAQ2YD98 709 aa7.85□□□□□ -1.15
RBM39-227ENST00000470563 AKAP4Q5JQC9 854 aa7.85□□□□□ -1.15
RBM39-227ENST00000470563 C16orf86Q6ZW13 317 aa7.85□□□□□ -1.15
RBM39-227ENST00000470563 MFSD2AQ8NA29 543 aa7.85□□□□□ -1.15
RBM39-227ENST00000470563 KLHL3Q9UH77 587 aa7.85□□□□□ -1.15
RBM39-227ENST00000470563 UBOX5O94941 541 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 SPATA31C1P0DKV0 1188 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 SNRPNP63162 240 aaKnown RBP7.84□□□□□ -1.15
RBM39-227ENST00000470563 SQSTM1Q13501 440 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 TTLL4Q14679 1199 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 SLC10A6Q3KNW5 377 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 PRRT3Q5FWE3 981 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 TAF7LQ5H9L4 462 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 LRRC47Q8N1G4 583 aaKnown RBP7.84□□□□□ -1.15
RBM39-227ENST00000470563 SVOPQ8N4V2 548 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 ZSWIM2Q8NEG5 633 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 EZH1Q92800 747 aaPredicted RBP7.84□□□□□ -1.15
RBM39-227ENST00000470563 ISL2Q96A47 359 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 SLC26A8Q96RN1 970 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 FEZ1Q99689 392 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 FOXQ1Q9C009 403 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 ACSS3Q9H6R3 686 aa7.84□□□□□ -1.15
RBM39-227ENST00000470563 FBRSQ9HAH7 460 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms