RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SLC10A4Q96EP9 437 aa8.03□□□□□ -1.12
VAMP3-202ENST00000470357 MASTLQ96GX5 879 aa8.03□□□□□ -1.12
VAMP3-202ENST00000470357 ZNF512BQ96KM6 892 aaPredicted RBP8.03□□□□□ -1.12
VAMP3-202ENST00000470357 CCDC8Q9H0W5 538 aaPredicted RBP8.03□□□□□ -1.12
VAMP3-202ENST00000470357 DBNLQ9UJU6 430 aaKnown RBP8.03□□□□□ -1.12
VAMP3-202ENST00000470357 SCN4AP35499 1836 aa8.03□□□□□ -1.12
VAMP3-202ENST00000470357 WDR33Q9C0J8 1336 aaKnown RBP8.03□□□□□ -1.12
VAMP3-202ENST00000470357 ZNF541Q9H0D2 1346 aa8.03□□□□□ -1.12
VAMP3-202ENST00000470357 CACNA1SQ13698 1873 aa8.02□□□□□ -1.12
VAMP3-202ENST00000470357 AKAP11Q9UKA4 1901 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 NR3C2P08235 984 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 GSPT1P15170 499 aaKnown RBP8.02□□□□□ -1.13
VAMP3-202ENST00000470357 SDSP20132 328 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 KCNJ4P48050 445 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 MAP2K1Q02750 393 aaPredicted RBP8.02□□□□□ -1.13
VAMP3-202ENST00000470357 CHRNDQ07001 517 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 MCM6Q14566 821 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 C8orf34Q49A92 452 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 TTC39AQ5SRH9 613 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 RUFY2Q8WXA3 655 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 CNKSR1Q969H4 720 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 XAGE2Q96GT9 111 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 DBNDD2Q9BQY9 259 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 PRM3Q9NNZ6 103 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 GNL3LQ9NVN8 582 aaKnown RBP8.02□□□□□ -1.13
VAMP3-202ENST00000470357 MINPP1Q9UNW1 487 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 MAP4K5Q9Y4K4 846 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 XDHP47989 1333 aa8.02□□□□□ -1.13
VAMP3-202ENST00000470357 CAPN5O15484 640 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-202ENST00000470357 FGFR2P21802 821 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 FSHRP23945 695 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 EPHX2P34913 555 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 WDR4P57081 412 aaKnown RBP8.01□□□□□ -1.13
VAMP3-202ENST00000470357 TIMM10P62072 90 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 FMR1Q06787 632 aaKnown RBP eCLIP8.01□□□□□ -1.13
VAMP3-202ENST00000470357 CAVIN4Q5BKX8 364 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 MAP1SQ66K74 1059 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-202ENST00000470357 CELF1Q92879 486 aaKnown RBP8.01□□□□□ -1.13
VAMP3-202ENST00000470357 RILPL2Q969X0 211 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 KCTD15Q96SI1 283 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-202ENST00000470357 HAUS7Q99871 368 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 GDPD2Q9HCC8 539 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 HACL1Q9UJ83 578 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 LEMD3Q9Y2U8 911 aa8.01□□□□□ -1.13
VAMP3-202ENST00000470357 THSD7BQ9C0I4 1608 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 CCDC85CA6NKD9 419 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 FZD9O00144 591 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 EPB41L2O43491 1005 aaKnown RBP8□□□□□ -1.13
VAMP3-202ENST00000470357 IGSF3O75054 1194 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 REC8O95072 547 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 ATP2B4P23634 1241 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 NR1H3Q13133 447 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 TTF1Q15361 905 aaPredicted RBP8□□□□□ -1.13
VAMP3-202ENST00000470357 EAPPQ56P03 285 aaPredicted RBP8□□□□□ -1.13
VAMP3-202ENST00000470357 SOGA3Q5TF21 947 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 CC2D2BQ6DHV5 1058 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 OLFM4Q6UX06 510 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 SP8Q8IXZ3 490 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 KLF16Q9BXK1 252 aaPredicted RBP8□□□□□ -1.13
VAMP3-202ENST00000470357 ZNF277Q9NRM2 450 aaPredicted RBP8□□□□□ -1.13
VAMP3-202ENST00000470357 TLR7Q9NYK1 1049 aaKnown RBP8□□□□□ -1.13
VAMP3-202ENST00000470357 ANKIB1Q9P2G1 1089 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 SNED1Q8TER0 1413 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 DUOX1Q9NRD9 1551 aa8□□□□□ -1.13
VAMP3-202ENST00000470357 DOCK2Q92608 1830 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 TAF5LO75529 589 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 ARID4AP29374 1257 aaPredicted RBP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 ABL2P42684 1182 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 FKBP4Q02790 459 aaKnown RBP eCLIP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 CST9Q5W186 159 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 TSHZ3Q63HK5 1081 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 CCDC102BQ68D86 513 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 ZSCAN25Q6NSZ9 544 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 TMED8Q6PL24 325 aaPredicted RBP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 TBC1D9Q6ZT07 1266 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 C15orf52Q6ZUT6 534 aaKnown RBP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 PNMA8AQ86V59 439 aaPredicted RBP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 VPS37DQ86XT2 251 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 FSD1Q9BTV5 496 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 BOLA2Q9H3K6 86 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 DIAPH3Q9NSV4 1193 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 PAG1Q9NWQ8 432 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 PODXL2Q9NZ53 605 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 CDV3Q9UKY7 258 aaKnown RBP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 ATP6V0A2Q9Y487 856 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 ZNF804BA4D1E1 1349 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 PDS5AQ29RF7 1337 aaKnown RBP7.99□□□□□ -1.13
VAMP3-202ENST00000470357 RAD50Q92878 1312 aa7.99□□□□□ -1.13
VAMP3-202ENST00000470357 COL4A1P02462 1669 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 LTBP1Q14766 1721 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 ZIC2O95409 532 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-202ENST00000470357 ZFYP08048 801 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-202ENST00000470357 TIMP2P16035 220 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 CHMLP26374 656 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 IRF5Q13568 498 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 CCDC93Q567U6 631 aa7.98□□□□□ -1.13
VAMP3-202ENST00000470357 ZNF787Q6DD87 383 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms