RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MIPEPQ99797 713 aa6.6□□□□□ -1.35
BRCA2-202ENST00000470094 GTF2IRD1Q9UHL9 959 aa6.6□□□□□ -1.35
BRCA2-202ENST00000470094 POLR3KQ9Y2Y1 108 aaPredicted RBP6.6□□□□□ -1.35
BRCA2-202ENST00000470094 KIAA1324LA8MWY0 1029 aaPredicted RBP6.59□□□□□ -1.35
BRCA2-202ENST00000470094 HTR3BO95264 441 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 MED26O95402 600 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 HDLBPQ00341 1268 aaKnown RBP6.59□□□□□ -1.35
BRCA2-202ENST00000470094 MLECQ14165 292 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 SEZ6Q53EL9 994 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 TMEM201Q5SNT2 666 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 MCATQ8IVS2 390 aaKnown RBP6.59□□□□□ -1.35
BRCA2-202ENST00000470094 Q8N3U1 123 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 FAM13CQ8NE31 585 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 XAGE3Q8WTP9 111 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 ZNF428Q96B54 188 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 ACSF2Q96CM8 615 aaPredicted RBP6.59□□□□□ -1.35
BRCA2-202ENST00000470094 DPH2Q9BQC3 489 aaPredicted RBP6.59□□□□□ -1.35
BRCA2-202ENST00000470094 NT5C1AQ9BXI3 368 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 UBP1Q9NZI7 540 aa6.59□□□□□ -1.35
BRCA2-202ENST00000470094 DDX41Q9UJV9 622 aaKnown RBP6.59□□□□□ -1.35
BRCA2-202ENST00000470094 PRR36Q9H6K5 1346 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 SLITRK5O94991 958 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 CRKP46108 304 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 YARSP54577 528 aaKnown RBP6.58□□□□□ -1.36
BRCA2-202ENST00000470094 MSMPQ1L6U9 139 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 LETMD1Q6P1Q0 360 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 METTL16Q86W50 562 aaKnown RBP6.58□□□□□ -1.36
BRCA2-202ENST00000470094 DTX1Q86Y01 620 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 NT5DC4Q86YG4 428 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 ZNF654Q8IZM8 581 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 FAM181AQ8N9Y4 354 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 BRMS1Q9HCU9 246 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 PRDM5Q9NQX1 630 aaPredicted RBP6.58□□□□□ -1.36
BRCA2-202ENST00000470094 REV1Q9UBZ9 1251 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 ZC3H7BQ9UGR2 993 aaKnown RBP6.58□□□□□ -1.36
BRCA2-202ENST00000470094 KLHL3Q9UH77 587 aa6.58□□□□□ -1.36
BRCA2-202ENST00000470094 TPX2Q9ULW0 747 aaKnown RBP6.58□□□□□ -1.36
BRCA2-202ENST00000470094 EOMESO95936 686 aa6.57□□□□□ -1.36
BRCA2-202ENST00000470094 SPINK2P20155 84 aa6.57□□□□□ -1.36
BRCA2-202ENST00000470094 MCM4P33991 863 aa6.57□□□□□ -1.36
BRCA2-202ENST00000470094 C9orf131Q5VYM1 1079 aa6.57□□□□□ -1.36
BRCA2-202ENST00000470094 ZNF746Q6NUN9 644 aaPredicted RBP6.57□□□□□ -1.36
BRCA2-202ENST00000470094 NKD1Q969G9 470 aa6.57□□□□□ -1.36
BRCA2-202ENST00000470094 MKNK2Q9HBH9 465 aa6.57□□□□□ -1.36
BRCA2-202ENST00000470094 MAPK8IP1Q9UQF2 711 aa6.57□□□□□ -1.36
BRCA2-202ENST00000470094 PCDHB14Q9Y5E9 798 aa6.57□□□□□ -1.36
BRCA2-202ENST00000470094 GNAT3A8MTJ3 354 aa6.56□□□□□ -1.36
BRCA2-202ENST00000470094 IGF2BP3O00425 579 aaKnown RBP eCLIP6.56□□□□□ -1.36
BRCA2-202ENST00000470094 ZNF165P49910 485 aa6.56□□□□□ -1.36
BRCA2-202ENST00000470094 RACK1P63244 317 aaKnown RBP6.56□□□□□ -1.36
BRCA2-202ENST00000470094 NETO1Q8TDF5 533 aa6.56□□□□□ -1.36
BRCA2-202ENST00000470094 EAF1Q96JC9 268 aaPredicted RBP6.56□□□□□ -1.36
BRCA2-202ENST00000470094 HEXIM2Q96MH2 286 aaKnown RBP6.56□□□□□ -1.36
BRCA2-202ENST00000470094 BSDC1Q9NW68 430 aaPredicted RBP6.56□□□□□ -1.36
BRCA2-202ENST00000470094 UPK3BL1B0FP48 263 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 UPK3BL2E5RIL1 263 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 ATE1O95260 518 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 CEACAM5P06731 702 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 ITIH2P19823 946 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 CYP7A1P22680 504 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 OXCT1P55809 520 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 GK5Q6ZS86 529 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 FAM214BQ7L5A3 538 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 NBPF11Q86T75 865 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 SLITRK4Q8IW52 837 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 SLFN12Q8IYM2 578 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 REXO1Q8N1G1 1221 aaKnown RBP6.55□□□□□ -1.36
BRCA2-202ENST00000470094 PLD6Q8N2A8 252 aaKnown RBP6.55□□□□□ -1.36
BRCA2-202ENST00000470094 CYB5D2Q8WUJ1 264 aa6.55□□□□□ -1.36
BRCA2-202ENST00000470094 ANGEL1Q9UNK9 670 aaKnown RBP6.55□□□□□ -1.36
BRCA2-202ENST00000470094 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.55□□□□□ -1.36
BRCA2-202ENST00000470094 ETV3P41162 512 aa6.54□□□□□ -1.36
BRCA2-202ENST00000470094 IFI16Q16666 785 aaKnown RBP6.54□□□□□ -1.36
BRCA2-202ENST00000470094 SFRP5Q5T4F7 317 aa6.54□□□□□ -1.36
BRCA2-202ENST00000470094 CDH24Q86UP0 819 aa6.54□□□□□ -1.36
BRCA2-202ENST00000470094 VSIG10LQ86VR7 867 aa6.54□□□□□ -1.36
BRCA2-202ENST00000470094 RIN3Q8TB24 985 aa6.54□□□□□ -1.36
BRCA2-202ENST00000470094 EHMT1Q9H9B1 1298 aa6.54□□□□□ -1.36
BRCA2-202ENST00000470094 U3KQE9 123 aa6.54□□□□□ -1.36
BRCA2-202ENST00000470094 CHURC1-FNTBB4DL54 471 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 WNT11O96014 354 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 PRNPP04156 253 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 TCF3P15923 654 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 TNNI2P48788 182 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 PAK2Q13177 524 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 PHACTR4Q8IZ21 702 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 STK11IPQ8N1F8 1099 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 MISP3Q96FF7 219 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 COX4I2Q96KJ9 171 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 GMIPQ9P107 970 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 CCDC39Q9UFE4 941 aa6.53□□□□□ -1.36
BRCA2-202ENST00000470094 TMEM265A0A087WTH1 108 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 E9PSI1 815 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 DNAJA2O60884 412 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 CLCQ05315 142 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 C22orf34Q6ZV56 151 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 MFSD4AQ8N468 514 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 DNAJB8Q8NHS0 232 aa6.52□□□□□ -1.37
BRCA2-202ENST00000470094 SPATA32Q96LK8 384 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms