RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 NIP7Q9Y221 180 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 ATP10DQ9P241 1426 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 TTC37Q6PGP7 1564 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 F8W031 263 aaPredicted RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 GMNNO75496 209 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 ADCY5O95622 1261 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 ASPHQ12797 758 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 IPO4Q8TEX9 1081 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 RSRC1Q96IZ7 334 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 GAS2L1Q99501 681 aaPredicted RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 HOMER3Q9NSC5 361 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 FAM8A1Q9UBU6 413 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 KCNH4Q9UQ05 1017 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 LUC7L2Q9Y383 392 aaKnown RBP6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 WDR19Q8NEZ3 1342 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 RGS12O14924 1447 aa6.86□□□□□ -1.31
CCDC144A-212ENST00000470068 P4HA1P13674 534 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 TDRD12Q587J7 1177 aaKnown RBP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 SEL1L2Q5TEA6 688 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 FYB2Q5VWT5 728 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 CCDC121Q6ZUS5 278 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 PDZD4Q76G19 769 aaPredicted RBP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 ZNF274Q96GC6 653 aaPredicted RBP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 RAB17Q9H0T7 212 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 MED4Q9NPJ6 270 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 PICK1Q9NRD5 415 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 TYW1Q9NV66 732 aaKnown RBP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 JRKLQ9Y4A0 524 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 CD2APQ9Y5K6 639 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 SHROOM2Q13796 1616 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 KDM5AP29375 1690 aaKnown RBP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 SMTNP53814 917 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 NOLC1Q14978 699 aaKnown RBP eCLIP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 CDCA7LQ96GN5 454 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 TMX3Q96JJ7 454 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 CCDC42Q96M95 316 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 EFCC1Q9HA90 598 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 DONSONQ9NYP3 566 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 NLRP1Q9C000 1473 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 GPTP24298 496 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 CUL4BQ13620 913 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 IFIT1BQ5T764 474 aaKnown RBP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 LDHAL6AQ6ZMR3 332 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 RUFY3Q7L099 469 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 CCDC117Q8IWD4 279 aaPredicted RBP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 LMNTD2Q8IXW0 634 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 PLBD2Q8NHP8 589 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 GPHNQ9NQX3 736 aaPredicted RBP6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 MID2Q9UJV3 735 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 SYCE3A1L190 88 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 TSPY2A6NKD2 308 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 ERVV-2B6SEH9 535 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 ANXA13P27216 316 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 MMP14P50281 582 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 PAK2Q13177 524 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 AOC3Q16853 763 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 RRAGBQ5VZM2 374 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 MAATS1Q7Z4T9 603 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 HAUS1Q96CS2 278 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 CSRNP1Q96S65 589 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 MYD88Q99836 296 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 NKIRAS1Q9NYS0 192 aa6.85□□□□□ -1.31
CCDC144A-212ENST00000470068 ANKARQ7Z5J8 1434 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 SMARCA5O60264 1052 aaPredicted RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 FOSP01100 380 aaPredicted RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 EPB41P11171 864 aaKnown RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 PRELPP51888 382 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 BPIFB4P59827 614 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 NOGQ13253 232 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 ZSCAN23Q3MJ62 389 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 DTHD1Q6ZMT9 781 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 ALG1Q9BT22 464 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 ZBTB40Q9NUA8 1239 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 PLA2R1Q13018 1463 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 AKR1B15C9JRZ8 316 aaPredicted RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 IPO5O00410 1097 aaKnown RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 KDM4AO75164 1064 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 CIB2O75838 187 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 SARNPP82979 210 aaKnown RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 SYCP3Q8IZU3 236 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 TTC39CQ8N584 583 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 SPZ1Q9BXG8 430 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 DNAI1Q9UI46 699 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 PATL2C9JE40 543 aaKnown RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 LUC7L3O95232 432 aaKnown RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 MAP1SQ66K74 1059 aaPredicted RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 SV2BQ7L1I2 683 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 TAX1BP1Q86VP1 789 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 RTKN2Q8IZC4 609 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 FBF1Q8TES7 1133 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 TSR2Q969E8 191 aaKnown RBP6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 AK8Q96MA6 479 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 SLC5A4Q9NY91 659 aa6.84□□□□□ -1.31
CCDC144A-212ENST00000470068 A0A1W2PQ27 194 aa6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 A0A1W2PQ64 194 aa6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 A0A1W2PQD8 194 aa6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 MATR3P43243 847 aaKnown RBP eCLIP6.84□□□□□ -1.32
CCDC144A-212ENST00000470068 MNAT1P51948 309 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms