RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 RAD51AP2Q09MP3 1159 aa11.76□□□□□ -0.53
SMC4-210ENST00000469762 SH3RF1Q7Z6J0 888 aa11.76□□□□□ -0.53
SMC4-210ENST00000469762 IFNL3Q8IZI9 196 aa11.76□□□□□ -0.53
SMC4-210ENST00000469762 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
SMC4-210ENST00000469762 ZCRB1Q8TBF4 217 aaKnown RBP11.76□□□□□ -0.53
SMC4-210ENST00000469762 TRERF1Q96PN7 1200 aa11.76□□□□□ -0.53
SMC4-210ENST00000469762 ZKSCAN3Q9BRR0 538 aa11.76□□□□□ -0.53
SMC4-210ENST00000469762 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.76□□□□□ -0.535e-8■■■□□ 16.4
SMC4-210ENST00000469762 ADD3Q9UEY8 706 aaKnown RBP11.76□□□□□ -0.53
SMC4-210ENST00000469762 LRP5O75197 1615 aa11.76□□□□□ -0.53
SMC4-210ENST00000469762 GSG1L2A8MUP6 293 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 PRKAB2O43741 272 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 PLCD1P51178 756 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
SMC4-210ENST00000469762 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
SMC4-210ENST00000469762 BEND6Q5SZJ8 279 aaPredicted RBP11.75□□□□□ -0.53
SMC4-210ENST00000469762 CDKAL1Q5VV42 579 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 LDHAL6AQ6ZMR3 332 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 ZSWIM4Q9H7M6 989 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 SUGCTQ9HAC7 445 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 STRN4Q9NRL3 753 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 PCDH11XQ9BZA7 1347 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 PCDH11YQ9BZA8 1340 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 GOLGA6L9A6NEM1 432 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 FOXP1Q9H334 677 aaPredicted RBP11.75□□□□□ -0.53
SMC4-210ENST00000469762 LZTFL1Q9NQ48 299 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 FECHP22830 423 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 MUM1L1Q5H9M0 696 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 NFXL1Q6ZNB6 911 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 NUTM2AQ8IVF1 878 aaPredicted RBP11.75□□□□□ -0.53
SMC4-210ENST00000469762 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 CCDC12Q8WUD4 166 aaPredicted RBP11.75□□□□□ -0.53
SMC4-210ENST00000469762 EPSTI1Q96J88 318 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 ANKRD36CQ5JPF3 1778 aa11.75□□□□□ -0.53
SMC4-210ENST00000469762 SPATA31A3Q5VYP0 1347 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 PDE8BO95263 885 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 FGFR2P21802 821 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 FXR1P51114 621 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMC4-210ENST00000469762 CRACR2BQ8N4Y2 399 aaPredicted RBP11.74□□□□□ -0.53
SMC4-210ENST00000469762 ARFGAP3Q9NP61 516 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 RAB21Q9UL25 225 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 SLC12A7Q9Y666 1083 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 PATL2C9JE40 543 aaKnown RBP11.74□□□□□ -0.53
SMC4-210ENST00000469762 IFIT3O14879 490 aaKnown RBP11.74□□□□□ -0.53
SMC4-210ENST00000469762 GYPCP04921 128 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 NOM1Q5C9Z4 860 aaKnown RBP11.74□□□□□ -0.53
SMC4-210ENST00000469762 SMYD4Q8IYR2 804 aaPredicted RBP11.74□□□□□ -0.53
SMC4-210ENST00000469762 TRIML1Q8N9V2 468 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
SMC4-210ENST00000469762 ZBTB9Q96C00 473 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 LCMT1Q9UIC8 334 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 ADAM21Q9UKJ8 722 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 CDHR2Q9BYE9 1310 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 CCDC151A5D8V7 595 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 PPP1R3GB7ZBB8 358 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 AKR1B15C9JRZ8 316 aaPredicted RBP11.74□□□□□ -0.53
SMC4-210ENST00000469762 ERCC5P28715 1186 aaPredicted RBP11.74□□□□□ -0.53
SMC4-210ENST00000469762 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 GOLGA1Q92805 767 aa11.74□□□□□ -0.53
SMC4-210ENST00000469762 N4BP1O75113 896 aaKnown RBP11.73□□□□□ -0.53
SMC4-210ENST00000469762 COBLO75128 1261 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 CDK11BP21127 795 aaKnown RBP11.73□□□□□ -0.53
SMC4-210ENST00000469762 USP5P45974 858 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 TRIM29Q14134 588 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 ARMT1Q9H993 441 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 RILPL1Q5EBL4 403 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 TAF7LQ5H9L4 462 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 CPLX2Q6PUV4 134 aaKnown RBP11.73□□□□□ -0.53
SMC4-210ENST00000469762 DNAJC10Q8IXB1 793 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 MSANTD4Q8NCY6 345 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 PUF60Q9UHX1 559 aaKnown RBP11.73□□□□□ -0.53
SMC4-210ENST00000469762 FEZ2Q9UHY8 353 aaPredicted RBP11.73□□□□□ -0.53
SMC4-210ENST00000469762 NUP98P52948 1817 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 MYH2Q9UKX2 1941 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 MBD4O95243 580 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 GPTP24298 496 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 CTSWP56202 376 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 STX17P56962 302 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 ERVK-24P63145 666 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 TTF1Q15361 905 aaPredicted RBP11.73□□□□□ -0.53
SMC4-210ENST00000469762 PKN1Q16512 942 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 AKNAD1Q5T1N1 836 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 HNRNPLLQ8WVV9 542 aaKnown RBP11.73□□□□□ -0.53
SMC4-210ENST00000469762 ZNF330Q9Y3S2 320 aaPredicted RBP11.73□□□□□ -0.53
SMC4-210ENST00000469762 WDR17Q8IZU2 1322 aa11.73□□□□□ -0.53
SMC4-210ENST00000469762 MFAP3LO75121 409 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 CCDC175P0C221 793 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 ARHGAP25P42331 645 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 CHMP4BP1P59074 171 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 SLC20A2Q08357 652 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 GIGYF2Q6Y7W6 1299 aaKnown RBP11.72□□□□□ -0.53
SMC4-210ENST00000469762 HELBQ8NG08 1087 aaPredicted RBP11.72□□□□□ -0.53
SMC4-210ENST00000469762 CPLX3Q8WVH0 158 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 L1RE1Q9UN81 338 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 MYH13Q9UKX3 1938 aa11.72□□□□□ -0.53
SMC4-210ENST00000469762 FUT2Q10981 343 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 744.8 ms