RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 METTL16Q86W50 562 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 NLGN1Q8N2Q7 840 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 CNNM3Q8NE01 707 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 SLC26A6Q9BXS9 759 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 KRT23Q9C075 422 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 NAPBQ9H115 298 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 KCNH3Q9ULD8 1083 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
SMARCD3-205ENST00000469154 MYH6P13533 1939 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 DDR1Q08345 913 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 KMT5BQ4FZB7 885 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 SYT10Q6XYQ8 523 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 FCHSD1Q86WN1 690 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 VSTM4Q8IW00 320 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 IFNL3Q8IZI9 196 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 CNBD1Q8NA66 436 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 PHLPP2Q6ZVD8 1323 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 IFIT3O14879 490 aaKnown RBP16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 SERPINB2P05120 415 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 IFNAR1P17181 557 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 SAFBQ15424 915 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 CFAP100Q494V2 611 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 CLIC6Q96NY7 704 aa16.29■□□□□ 0.2
SMARCD3-205ENST00000469154 KIF20AO95235 890 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 SLC5A1P13866 664 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 FGFR2P21802 821 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 MAP3K12Q12852 859 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 CCDC152Q4G0S7 254 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 PDGFDQ9GZP0 370 aaPredicted RBP16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 EPB41L4AQ9HCS5 686 aaPredicted RBP16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 V9GYY5 206 aaPredicted RBP16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 COL24A1Q17RW2 1714 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 MBD4O95243 580 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 LONRF3Q496Y0 759 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 CCDC93Q567U6 631 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 PRR5LQ6MZQ0 368 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 FBXO38Q6PIJ6 1188 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 SPATA5Q8NB90 893 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 DPF2Q92785 391 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 NOL10Q9BSC4 688 aaKnown RBP16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 SEC31BQ9NQW1 1179 aa16.28■□□□□ 0.2
SMARCD3-205ENST00000469154 POLRMTO00411 1230 aaKnown RBP16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 MMP1P03956 469 aa16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 TOP1P11387 765 aaKnown RBP16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 ETF1P62495 437 aaKnown RBP16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 AKNAD1Q5T1N1 836 aa16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 HOMER1Q86YM7 354 aa16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 TRIM22Q8IYM9 498 aa16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 KRT222Q8N1A0 295 aa16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 MYL10Q9BUA6 226 aa16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMARCD3-205ENST00000469154 CTDSPL2Q05D32 466 aa16.27■□□□□ 0.19
SMARCD3-205ENST00000469154 NLRP3Q96P20 1036 aa16.27■□□□□ 0.19
SMARCD3-205ENST00000469154 MTA3Q9BTC8 594 aa16.27■□□□□ 0.19
SMARCD3-205ENST00000469154 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.19
SMARCD3-205ENST00000469154 DACH1Q9UI36 760 aa16.27■□□□□ 0.19
SMARCD3-205ENST00000469154 PCDHA5Q9Y5H7 936 aa16.27■□□□□ 0.19
SMARCD3-205ENST00000469154 MMP10P09238 476 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 GNAT2P19087 354 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 MAGEB6Q8N7X4 407 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 ZSCAN12O43309 604 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 RCAN1P53805 252 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 RTN1Q16799 776 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 RILPL1Q5EBL4 403 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 MFSD6Q6ZSS7 791 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 NACAP1Q9BZK3 213 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 FANCLQ9NW38 375 aa16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
SMARCD3-205ENST00000469154 MDM2Q00987 491 aaPredicted RBP16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 DIS3L2Q8IYB7 885 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 STK11IPQ8N1F8 1099 aa16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 STAG1Q8WVM7 1258 aa16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 ARMT1Q9H993 441 aa16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 FAM53CQ9NYF3 392 aa16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 LAMB2P55268 1798 aa16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 DEXIO95424 95 aa16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 WTAPQ15007 396 aa16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 SRRTQ9BXP5 876 aaKnown RBP16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 FBXO2Q9UK22 296 aaPredicted RBP16.25■□□□□ 0.19
SMARCD3-205ENST00000469154 CCDC196A0A1B0GTZ2 297 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 GSG1L2A8MUP6 293 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 ARHGAP6O43182 974 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 H2AFXP16104 143 aaPredicted RBP16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 PTPREP23469 700 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 ST5P78524 1137 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 POSTNQ15063 836 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 FOXP4Q8IVH2 680 aaPredicted RBP16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 TRIML1Q8N9V2 468 aa16.24■□□□□ 0.19
SMARCD3-205ENST00000469154 ZNF579Q8NAF0 562 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms