RNA–Protein interactions for RNA: ENST00000468459.5

COL16A1-208, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 620 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-208ENST00000468459 RIOK1Q9BRS2 568 aaKnown RBP17.76■□□□□ 0.43
COL16A1-208ENST00000468459 NOL10Q9BSC4 688 aaKnown RBP17.76■□□□□ 0.43
COL16A1-208ENST00000468459 MYH7P12883 1935 aa17.76■□□□□ 0.43
COL16A1-208ENST00000468459 TRIM75PA6NK02 468 aa17.75■□□□□ 0.43
COL16A1-208ENST00000468459 RNF113AO15541 343 aaKnown RBP17.75■□□□□ 0.43
COL16A1-208ENST00000468459 UBE3CQ15386 1083 aa17.75■□□□□ 0.43
COL16A1-208ENST00000468459 METTL16Q86W50 562 aaKnown RBP17.75■□□□□ 0.43
COL16A1-208ENST00000468459 LCORLQ8N3X6 602 aa17.75■□□□□ 0.43
COL16A1-208ENST00000468459 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
COL16A1-208ENST00000468459 ARMT1Q9H993 441 aa17.75■□□□□ 0.43
COL16A1-208ENST00000468459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.75■□□□□ 0.43
COL16A1-208ENST00000468459 MAGEB6P1A0A0J9YX57 407 aa17.74■□□□□ 0.43
COL16A1-208ENST00000468459 ECM2O94769 699 aaPredicted RBP17.74■□□□□ 0.43
COL16A1-208ENST00000468459 MBD4O95243 580 aa17.74■□□□□ 0.43
COL16A1-208ENST00000468459 BAG3O95817 575 aa17.74■□□□□ 0.43
COL16A1-208ENST00000468459 CAP2P40123 477 aa17.74■□□□□ 0.43
COL16A1-208ENST00000468459 ZSCAN25Q6NSZ9 544 aa17.74■□□□□ 0.43
COL16A1-208ENST00000468459 OSBP2Q969R2 916 aa17.74■□□□□ 0.43
COL16A1-208ENST00000468459 PUS7LQ9H0K6 701 aaKnown RBP17.74■□□□□ 0.43
COL16A1-208ENST00000468459 PI4KBQ9UBF8 816 aa17.74■□□□□ 0.43
COL16A1-208ENST00000468459 HERC5Q9UII4 1024 aaKnown RBP17.74■□□□□ 0.43
COL16A1-208ENST00000468459 M0R2C6 588 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 SDSP20132 328 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 HOXD10P28358 340 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 TREML2Q5T2D2 321 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 TMED8Q6PL24 325 aaPredicted RBP17.73■□□□□ 0.43
COL16A1-208ENST00000468459 GADL1Q6ZQY3 521 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 MAPKAPK5Q8IW41 473 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 TGFBRAP1Q8WUH2 860 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 APPBP2Q92624 585 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 SEC62Q99442 399 aaKnown RBP17.73■□□□□ 0.43
COL16A1-208ENST00000468459 DHX36Q9H2U1 1008 aaKnown RBP17.73■□□□□ 0.43
COL16A1-208ENST00000468459 DNAJC18Q9H819 358 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 AGTPBP1Q9UPW5 1226 aa17.73■□□□□ 0.43
COL16A1-208ENST00000468459 AK9Q5TCS8 1911 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 FMNL1O95466 1100 aaPredicted RBP17.72■□□□□ 0.43
COL16A1-208ENST00000468459 PLCG2P16885 1265 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 JAG1P78504 1218 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 PRKCZQ05513 592 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 SPP2Q13103 211 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 ZMYM1Q5SVZ6 1142 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 ZNF280CQ8ND82 737 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 ZSWIM8A7E2V4 1837 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 FLT1P17948 1338 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
COL16A1-208ENST00000468459 PRKAB2O43741 272 aa17.71■□□□□ 0.43
COL16A1-208ENST00000468459 MYCP01106 439 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-208ENST00000468459 ZFYP08048 801 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-208ENST00000468459 FCGRTP55899 365 aa17.71■□□□□ 0.43
COL16A1-208ENST00000468459 MTFR1Q15390 333 aa17.71■□□□□ 0.43
COL16A1-208ENST00000468459 SLC4A8Q2Y0W8 1093 aa17.71■□□□□ 0.43
COL16A1-208ENST00000468459 SH3D19Q5HYK7 790 aa17.71■□□□□ 0.43
COL16A1-208ENST00000468459 PROCA1Q8NCQ7 364 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-208ENST00000468459 FAM227BQ96M60 508 aa17.71■□□□□ 0.43
COL16A1-208ENST00000468459 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
COL16A1-208ENST00000468459 CDK5RAP2Q96SN8 1893 aa17.7■□□□□ 0.42
COL16A1-208ENST00000468459 A0A0D9SFI3 127 aa17.7■□□□□ 0.42
COL16A1-208ENST00000468459 GRK4P32298 578 aa17.7■□□□□ 0.42
COL16A1-208ENST00000468459 NMIQ13287 307 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-208ENST00000468459 CCDC129Q6ZRS4 1044 aa17.7■□□□□ 0.42
COL16A1-208ENST00000468459 FOXP4Q8IVH2 680 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-208ENST00000468459 RAET1EQ8TD07 263 aa17.7■□□□□ 0.42
COL16A1-208ENST00000468459 SDR42E1Q8WUS8 393 aa17.7■□□□□ 0.42
COL16A1-208ENST00000468459 SAP30BPQ9UHR5 308 aaKnown RBP17.7■□□□□ 0.42
COL16A1-208ENST00000468459 GABRQQ9UN88 632 aa17.7■□□□□ 0.42
COL16A1-208ENST00000468459 RBBP6Q7Z6E9 1792 aaKnown RBP17.69■□□□□ 0.42
COL16A1-208ENST00000468459 USP17L5A8MUK1 530 aa17.69■□□□□ 0.42
COL16A1-208ENST00000468459 LRRFIP1Q32MZ4 808 aaKnown RBP17.69■□□□□ 0.42
COL16A1-208ENST00000468459 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
COL16A1-208ENST00000468459 WDR18Q9BV38 432 aa17.69■□□□□ 0.42
COL16A1-208ENST00000468459 CRNKL1Q9BZJ0 848 aaKnown RBP17.69■□□□□ 0.42
COL16A1-208ENST00000468459 PALD1Q9ULE6 856 aa17.69■□□□□ 0.42
COL16A1-208ENST00000468459 FOCADQ5VW36 1801 aa17.68■□□□□ 0.42
COL16A1-208ENST00000468459 GPAA1O43292 621 aa17.68■□□□□ 0.42
COL16A1-208ENST00000468459 USP5P45974 858 aa17.68■□□□□ 0.42
COL16A1-208ENST00000468459 HMGCS2P54868 508 aa17.68■□□□□ 0.42
COL16A1-208ENST00000468459 DDX60LQ5H9U9 1706 aaKnown RBP17.68■□□□□ 0.42
COL16A1-208ENST00000468459 CERS3Q8IU89 383 aa17.68■□□□□ 0.42
COL16A1-208ENST00000468459 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
COL16A1-208ENST00000468459 STRBPQ96SI9 672 aaKnown RBP17.68■□□□□ 0.42
COL16A1-208ENST00000468459 ASNSP08243 561 aa17.67■□□□□ 0.42
COL16A1-208ENST00000468459 FLT3LGP49771 235 aa17.67■□□□□ 0.42
COL16A1-208ENST00000468459 EVX2Q03828 476 aa17.67■□□□□ 0.42
COL16A1-208ENST00000468459 FAM110CQ1W6H9 321 aa17.67■□□□□ 0.42
COL16A1-208ENST00000468459 SHROOM1Q2M3G4 852 aaPredicted RBP17.67■□□□□ 0.42
COL16A1-208ENST00000468459 ANKRD13CQ8N6S4 541 aa17.67■□□□□ 0.42
COL16A1-208ENST00000468459 SLC4A4Q9Y6R1 1079 aa17.67■□□□□ 0.42
COL16A1-208ENST00000468459 PHIPQ8WWQ0 1821 aa17.67■□□□□ 0.42
COL16A1-208ENST00000468459 DOCK1Q14185 1865 aa17.67■□□□□ 0.42
COL16A1-208ENST00000468459 BACE1P56817 501 aa17.66■□□□□ 0.42
COL16A1-208ENST00000468459 IRF5Q13568 498 aa17.66■□□□□ 0.42
COL16A1-208ENST00000468459 UBE2Q1Q7Z7E8 422 aa17.66■□□□□ 0.42
COL16A1-208ENST00000468459 ZNF589Q86UQ0 364 aaPredicted RBP17.66■□□□□ 0.42
COL16A1-208ENST00000468459 SLAIN1Q8ND83 568 aa17.66■□□□□ 0.42
COL16A1-208ENST00000468459 AS3MTQ9HBK9 375 aa17.66■□□□□ 0.42
COL16A1-208ENST00000468459 DCP1AQ9NPI6 582 aaPredicted RBP17.66■□□□□ 0.42
COL16A1-208ENST00000468459 DIAPH3Q9NSV4 1193 aa17.66■□□□□ 0.42
COL16A1-208ENST00000468459 GINM1Q9NU53 330 aa17.66■□□□□ 0.42
COL16A1-208ENST00000468459 PNMA3Q9UL41 463 aa17.66■□□□□ 0.42
COL16A1-208ENST00000468459 NAV1Q8NEY1 1877 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms