RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 MFAP1P55081 439 aaKnown RBP23.95■■□□□ 1.42
NPHP4-206ENST00000468253 ALX1Q15699 326 aa23.95■■□□□ 1.42
NPHP4-206ENST00000468253 FASTKD5Q7L8L6 764 aaKnown RBP23.95■■□□□ 1.42
NPHP4-206ENST00000468253 ZNF280CQ8ND82 737 aa23.95■■□□□ 1.42
NPHP4-206ENST00000468253 FAM227BQ96M60 508 aa23.95■■□□□ 1.42
NPHP4-206ENST00000468253 AS3MTQ9HBK9 375 aa23.95■■□□□ 1.42
NPHP4-206ENST00000468253 A0A0G2JLL6 359 aaPredicted RBP23.94■■□□□ 1.42
NPHP4-206ENST00000468253 GSPT1P15170 499 aaKnown RBP23.94■■□□□ 1.42
NPHP4-206ENST00000468253 NMIQ13287 307 aaPredicted RBP23.94■■□□□ 1.42
NPHP4-206ENST00000468253 C16orf86Q6ZW13 317 aa23.94■■□□□ 1.42
NPHP4-206ENST00000468253 PRRT2Q7Z6L0 340 aaPredicted RBP23.94■■□□□ 1.42
NPHP4-206ENST00000468253 CCDC17Q96LX7 622 aa23.94■■□□□ 1.42
NPHP4-206ENST00000468253 CABP5Q9NP86 173 aa23.94■■□□□ 1.42
NPHP4-206ENST00000468253 FOCADQ5VW36 1801 aa23.94■■□□□ 1.42
NPHP4-206ENST00000468253 LBX1P52954 281 aa23.93■■□□□ 1.42
NPHP4-206ENST00000468253 JAG1P78504 1218 aa23.93■■□□□ 1.42
NPHP4-206ENST00000468253 MOGSQ13724 837 aa23.93■■□□□ 1.42
NPHP4-206ENST00000468253 ABCB5Q2M3G0 1257 aa23.93■■□□□ 1.42
NPHP4-206ENST00000468253 ANKRD23Q86SG2 305 aa23.93■■□□□ 1.42
NPHP4-206ENST00000468253 EPB41L4AQ9HCS5 686 aaPredicted RBP23.93■■□□□ 1.42
NPHP4-206ENST00000468253 ZBTB21Q9ULJ3 1066 aa23.93■■□□□ 1.42
NPHP4-206ENST00000468253 A0A0D9SFI3 127 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 GH2P01242 217 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 TDO2P48775 406 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 CDK8P49336 464 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 SPP2Q13103 211 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 DYNLL2Q96FJ2 89 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 DIAPH3Q9NSV4 1193 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 PPP4R2Q9NY27 417 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 MYH7P12883 1935 aa23.92■■□□□ 1.42
NPHP4-206ENST00000468253 CYP2D7A0A087X1C5 515 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 C19orf81C9J6K1 198 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 BTBD19C9JJ37 291 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 GDF11O95390 407 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 EVX2Q03828 476 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 SH3D19Q5HYK7 790 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 CCDC129Q6ZRS4 1044 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 NAPBQ9H115 298 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 ZNF287Q9HBT7 754 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 CDK5RAP2Q96SN8 1893 aa23.91■■□□□ 1.42
NPHP4-206ENST00000468253 MINDY4BA8MYZ0 360 aa23.9■■□□□ 1.42
NPHP4-206ENST00000468253 FOXP2O15409 715 aa23.9■■□□□ 1.42
NPHP4-206ENST00000468253 TBC1D8O95759 1140 aa23.9■■□□□ 1.42
NPHP4-206ENST00000468253 BACE1P56817 501 aa23.9■■□□□ 1.42
NPHP4-206ENST00000468253 FAM43AQ8N2R8 423 aa23.9■■□□□ 1.42
NPHP4-206ENST00000468253 SLC45A1Q9Y2W3 748 aa23.9■■□□□ 1.42
NPHP4-206ENST00000468253 OTOFQ9HC10 1997 aa23.9■■□□□ 1.42
NPHP4-206ENST00000468253 TRIM75PA6NK02 468 aa23.89■■□□□ 1.41
NPHP4-206ENST00000468253 HSPD1P10809 573 aaKnown RBP23.89■■□□□ 1.41
NPHP4-206ENST00000468253 GPAT2Q6NUI2 795 aa23.89■■□□□ 1.41
NPHP4-206ENST00000468253 PROCA1Q8NCQ7 364 aaPredicted RBP23.89■■□□□ 1.41
NPHP4-206ENST00000468253 ZFYVE28Q9HCC9 887 aa23.89■■□□□ 1.41
NPHP4-206ENST00000468253 MYH1P12882 1939 aa23.88■■□□□ 1.41
NPHP4-206ENST00000468253 CCDC171Q6TFL3 1326 aa23.88■■□□□ 1.41
NPHP4-206ENST00000468253 USP17L10C9JJH3 530 aa23.88■■□□□ 1.41
NPHP4-206ENST00000468253 SLC3A2P08195 630 aaKnown RBP23.88■■□□□ 1.41
NPHP4-206ENST00000468253 CWC27Q6UX04 472 aaKnown RBP23.88■■□□□ 1.41
NPHP4-206ENST00000468253 TMEM179Q6ZVK1 233 aa23.88■■□□□ 1.41
NPHP4-206ENST00000468253 CCDC84Q86UT8 332 aaPredicted RBP23.88■■□□□ 1.41
NPHP4-206ENST00000468253 SLC44A5Q8NCS7 719 aa23.88■■□□□ 1.41
NPHP4-206ENST00000468253 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.88■■□□□ 1.41
NPHP4-206ENST00000468253 TSKSQ9UJT2 592 aa23.88■■□□□ 1.41
NPHP4-206ENST00000468253 SMIM22K7EJ46 135 aa23.87■■□□□ 1.41
NPHP4-206ENST00000468253 GPR25O00155 361 aa23.87■■□□□ 1.41
NPHP4-206ENST00000468253 FGAP02671 866 aa23.87■■□□□ 1.41
NPHP4-206ENST00000468253 GUCY1A2P33402 732 aa23.87■■□□□ 1.41
NPHP4-206ENST00000468253 VPS53Q5VIR6 699 aa23.87■■□□□ 1.41
NPHP4-206ENST00000468253 ZNF589Q86UQ0 364 aaPredicted RBP23.87■■□□□ 1.41
NPHP4-206ENST00000468253 MKNK2Q9HBH9 465 aa23.87■■□□□ 1.41
NPHP4-206ENST00000468253 ANAPC4Q9UJX5 808 aa23.87■■□□□ 1.41
NPHP4-206ENST00000468253 SIPA1L1O43166 1804 aa23.87■■□□□ 1.41
NPHP4-206ENST00000468253 PDHXO00330 501 aa23.86■■□□□ 1.41
NPHP4-206ENST00000468253 CHMLP26374 656 aa23.86■■□□□ 1.41
NPHP4-206ENST00000468253 RAB3GAP1Q15042 981 aa23.86■■□□□ 1.41
NPHP4-206ENST00000468253 SHROOM1Q2M3G4 852 aaPredicted RBP23.86■■□□□ 1.41
NPHP4-206ENST00000468253 RUFY2Q8WXA3 655 aa23.86■■□□□ 1.41
NPHP4-206ENST00000468253 R3HDMLQ9H3Y0 253 aa23.86■■□□□ 1.41
NPHP4-206ENST00000468253 ROBO3Q96MS0 1386 aa23.86■■□□□ 1.41
NPHP4-206ENST00000468253 ZMYM6O95789 1325 aa23.85■■□□□ 1.41
NPHP4-206ENST00000468253 PDE4BQ07343 736 aa23.85■■□□□ 1.41
NPHP4-206ENST00000468253 PPARAQ07869 468 aa23.85■■□□□ 1.41
NPHP4-206ENST00000468253 CRHR2Q13324 411 aa23.85■■□□□ 1.41
NPHP4-206ENST00000468253 TAF1CQ15572 869 aaPredicted RBP23.85■■□□□ 1.41
NPHP4-206ENST00000468253 AGTPBP1Q9UPW5 1226 aa23.85■■□□□ 1.41
NPHP4-206ENST00000468253 MPHOSPH10O00566 681 aaKnown RBP23.84■■□□□ 1.41
NPHP4-206ENST00000468253 TLR2O60603 784 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 USP14P54578 494 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 PABPC4Q13310 644 aaKnown RBP eCLIP23.84■■□□□ 1.41
NPHP4-206ENST00000468253 SEPT2Q15019 361 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 BMP2KLQ5H9B9 411 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 USP17L2Q6R6M4 530 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 GADL1Q6ZQY3 521 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 ZNF444Q8N0Y2 327 aaPredicted RBP23.84■■□□□ 1.41
NPHP4-206ENST00000468253 KIAA1683Q9H0B3 1180 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 KANSL2Q9H9L4 492 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 TMOD4Q9NZQ9 345 aa23.84■■□□□ 1.41
NPHP4-206ENST00000468253 FGRP09769 529 aa23.83■■□□□ 1.41
NPHP4-206ENST00000468253 AKR1B1P15121 316 aa23.83■■□□□ 1.41
NPHP4-206ENST00000468253 HMGCS2P54868 508 aa23.83■■□□□ 1.41
NPHP4-206ENST00000468253 DSCC1Q9BVC3 393 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms