RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 USP11P51784 963 aa7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 FAM13CQ8NE31 585 aa7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 HNRNPLLQ8WVV9 542 aaKnown RBP7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 WFDC12Q8WWY7 111 aa7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 FAM46AQ96IP4 442 aaKnown RBP7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 ACSS3Q9H6R3 686 aa7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 PHAXQ9H814 394 aaKnown RBP7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 SSU72Q9NP77 194 aaKnown RBP7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 FAM105AQ9NUU6 356 aa7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 TJP2Q9UDY2 1190 aa7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 KLHL3Q9UH77 587 aa7.64□□□□□ -1.19
GAPVD1-211ENST00000467707 RNGTTO60942 597 aaKnown RBP7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 NEFMP07197 916 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 HCLS1P14317 486 aaPredicted RBP7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 PREPP48147 710 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 MBTPS1Q14703 1052 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 PPP2R5EQ16537 467 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 TTC6Q86TZ1 520 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 TXNRD3Q86VQ6 643 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 MFSD2AQ8NA29 543 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 ISL2Q96A47 359 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 DHRS1Q96LJ7 313 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 ANTXR1Q9H6X2 564 aa7.63□□□□□ -1.19
GAPVD1-211ENST00000467707 A0A1W2PQH9 124 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 LOC105371045A0A1W2PR82 267 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 K7ELQ4 463 aaPredicted RBP7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 LRIG2O94898 1065 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 ALX3O95076 343 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 CST3P01034 146 aaPredicted RBP7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 CANXP27824 592 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 NOS3P29474 1203 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 MAP7Q14244 749 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 DDR2Q16832 855 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 ARSHQ5FYA8 562 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 DZIP1LQ8IYY4 767 aaKnown RBP7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 EZH1Q92800 747 aaPredicted RBP7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 MRFAP1L1Q96HT8 127 aa7.62□□□□□ -1.19
GAPVD1-211ENST00000467707 DNAJA2O60884 412 aa7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 IREB2P48200 963 aaKnown RBP7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 SLBPQ14493 270 aaKnown RBP eCLIP7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 BBS9Q3SYG4 887 aa7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 CYB5D2Q8WUJ1 264 aa7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 MYRFLQ96LU7 910 aa7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 CCDC74BQ96LY2 380 aa7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 CCDC113Q9H0I3 377 aa7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 FBRSQ9HAH7 460 aa7.61□□□□□ -1.19
GAPVD1-211ENST00000467707 CHURC1-FNTBB4DL54 471 aa7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 RGS13O14921 159 aa7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 NCAPHQ15003 741 aa7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 UNC5AQ6ZN44 842 aa7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 RUFY4Q6ZNE9 571 aa7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 PHACTR4Q8IZ21 702 aa7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 UTP4Q969X6 686 aaKnown RBP7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 TNKS2Q9H2K2 1166 aa7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 CDK11AQ9UQ88 783 aaPredicted RBP7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 TMA7Q9Y2S6 64 aaKnown RBP7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 MSRB2Q9Y3D2 182 aa7.6□□□□□ -1.19
GAPVD1-211ENST00000467707 ACRP10323 421 aa7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 BMS1Q14692 1282 aaKnown RBP7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 NKG7Q16617 165 aa7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 PRAMEF13Q5VWM6 474 aa7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 LARP1BQ659C4 914 aaKnown RBP7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 ARMCX6Q7L4S7 300 aa7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 DEPDC7Q96QD5 511 aa7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 UBL7Q96S82 380 aaPredicted RBP7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 SRPK1Q96SB4 655 aaKnown RBP7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 SLC9A7Q96T83 725 aa7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 SEMA6CQ9H3T2 930 aa7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 MAPK8IP1Q9UQF2 711 aa7.59□□□□□ -1.19
GAPVD1-211ENST00000467707 UPK3BL1B0FP48 263 aa7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 UPK3BL2E5RIL1 263 aa7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 RAB6AP20340 208 aa7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 GBP1P32455 592 aa7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 ZNF746Q6NUN9 644 aaPredicted RBP7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 CDPF1Q6NVV7 123 aa7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 CELF2-AS1Q8N7Q2 184 aa7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 GIMAP7Q8NHV1 300 aa7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 SMARCC1Q92922 1105 aaPredicted RBP7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 ZNF669Q96BR6 464 aaPredicted RBP7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 DAGLAQ9Y4D2 1042 aa7.58□□□□□ -1.2
GAPVD1-211ENST00000467707 DHX15O43143 795 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 BMP3P12645 472 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 MAP4P27816 1152 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 CHMP4BP1P59074 171 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 RASGRF1Q13972 1273 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 RASA3Q14644 834 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 VHLLQ6RSH7 139 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 FAM20CQ8IXL6 584 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 FAM178BQ8IXR5 827 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 PIF1Q9H611 641 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 SNTG2Q9NY99 539 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 STK17AQ9UEE5 414 aa7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 ZNF214Q9UL59 606 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-211ENST00000467707 FAM95CA0A1B0GW59 222 aa7.56□□□□□ -1.2
GAPVD1-211ENST00000467707 DDAH1O94760 285 aa7.56□□□□□ -1.2
GAPVD1-211ENST00000467707 NFICP08651 508 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms