RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 SLC17A8Q8NDX2 589 aa19.27■□□□□ 0.68
TSSC4-208ENST00000467308 SOCS4Q8WXH5 440 aa19.27■□□□□ 0.68
TSSC4-208ENST00000467308 TRIB2Q92519 343 aa19.27■□□□□ 0.68
TSSC4-208ENST00000467308 FRAT1Q92837 279 aaPredicted RBP19.27■□□□□ 0.68
TSSC4-208ENST00000467308 LRCH3Q96II8 777 aa19.27■□□□□ 0.68
TSSC4-208ENST00000467308 GINM1Q9NU53 330 aa19.27■□□□□ 0.68
TSSC4-208ENST00000467308 TMOD4Q9NZQ9 345 aa19.27■□□□□ 0.68
TSSC4-208ENST00000467308 OGDHLQ9ULD0 1010 aa19.27■□□□□ 0.68
TSSC4-208ENST00000467308 FOCADQ5VW36 1801 aa19.27■□□□□ 0.68
TSSC4-208ENST00000467308 CDK5RAP2Q96SN8 1893 aa19.26■□□□□ 0.67
TSSC4-208ENST00000467308 C19orf81C9J6K1 198 aa19.26■□□□□ 0.67
TSSC4-208ENST00000467308 TRIM27P14373 513 aa19.26■□□□□ 0.67
TSSC4-208ENST00000467308 G3BP1Q13283 466 aaKnown RBP eCLIP19.26■□□□□ 0.67
TSSC4-208ENST00000467308 GPRC5AQ8NFJ5 357 aa19.26■□□□□ 0.67
TSSC4-208ENST00000467308 C11orf49Q9H6J7 331 aa19.26■□□□□ 0.67
TSSC4-208ENST00000467308 IGSF3O75054 1194 aa19.25■□□□□ 0.67
TSSC4-208ENST00000467308 GNAI2P04899 355 aa19.25■□□□□ 0.67
TSSC4-208ENST00000467308 PPP4CP60510 307 aa19.25■□□□□ 0.67
TSSC4-208ENST00000467308 NAA16Q6N069 864 aaPredicted RBP19.25■□□□□ 0.67
TSSC4-208ENST00000467308 FOXP4Q8IVH2 680 aaPredicted RBP19.25■□□□□ 0.67
TSSC4-208ENST00000467308 TRMT44Q8IYL2 757 aaKnown RBP19.25■□□□□ 0.67
TSSC4-208ENST00000467308 P2RX7Q99572 595 aaKnown RBP19.25■□□□□ 0.67
TSSC4-208ENST00000467308 NUDT12Q9BQG2 462 aa19.25■□□□□ 0.67
TSSC4-208ENST00000467308 PRKAR2AP13861 404 aaKnown RBP19.24■□□□□ 0.67
TSSC4-208ENST00000467308 CYP2B6P20813 491 aa19.24■□□□□ 0.67
TSSC4-208ENST00000467308 HERVK_113P62684 666 aa19.24■□□□□ 0.67
TSSC4-208ENST00000467308 GTF3C2Q8WUA4 911 aaPredicted RBP19.24■□□□□ 0.67
TSSC4-208ENST00000467308 DNAJC18Q9H819 358 aa19.24■□□□□ 0.67
TSSC4-208ENST00000467308 AATFQ9NY61 560 aaKnown RBP eCLIP19.24■□□□□ 0.67
TSSC4-208ENST00000467308 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 USP17L10C9JJH3 530 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 DLL1O00548 723 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 MAPK4P31152 587 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 LRIT3Q3SXY7 679 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 TGFBRAP1Q8WUH2 860 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 TXNRD2Q9NNW7 524 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 GPR108Q9NPR9 543 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 ZMYND8Q9ULU4 1186 aaPredicted RBP19.23■□□□□ 0.67
TSSC4-208ENST00000467308 FLT1P17948 1338 aa19.23■□□□□ 0.67
TSSC4-208ENST00000467308 JAG1P78504 1218 aa19.22■□□□□ 0.67
TSSC4-208ENST00000467308 C20orf194Q5TEA3 1177 aa19.22■□□□□ 0.67
TSSC4-208ENST00000467308 CRACR2BQ8N4Y2 399 aaPredicted RBP19.22■□□□□ 0.67
TSSC4-208ENST00000467308 TRIM34Q9BYJ4 488 aa19.22■□□□□ 0.67
TSSC4-208ENST00000467308 RBPJLQ9UBG7 517 aa19.22■□□□□ 0.67
TSSC4-208ENST00000467308 ZKSCAN1P17029 563 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-208ENST00000467308 MAGEA10P43363 369 aaPredicted RBP19.21■□□□□ 0.67
TSSC4-208ENST00000467308 CCDC158Q5M9N0 1113 aa19.21■□□□□ 0.67
TSSC4-208ENST00000467308 MAPKAPK5Q8IW41 473 aa19.21■□□□□ 0.67
TSSC4-208ENST00000467308 USP6NLQ92738 828 aa19.21■□□□□ 0.67
TSSC4-208ENST00000467308 ZBTB21Q9ULJ3 1066 aa19.21■□□□□ 0.67
TSSC4-208ENST00000467308 PFASO15067 1338 aa19.21■□□□□ 0.67
TSSC4-208ENST00000467308 MYO5AQ9Y4I1 1855 aaKnown RBP19.2■□□□□ 0.66
TSSC4-208ENST00000467308 COL6A1P12109 1028 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 SYN1P17600 705 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 ERVK-9P63128 1117 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 ERVK-24P63145 666 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 AAMPQ13685 434 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 TTC39AQ5SRH9 613 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 ADGRA1Q86SQ6 560 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 FTSJ3Q8IY81 847 aaKnown RBP19.2■□□□□ 0.66
TSSC4-208ENST00000467308 TDHQ8IZJ6 230 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 ZNF512BQ96KM6 892 aaPredicted RBP19.2■□□□□ 0.66
TSSC4-208ENST00000467308 SNRKQ9NRH2 765 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 CUL9Q8IWT3 2517 aa19.2■□□□□ 0.66
TSSC4-208ENST00000467308 PEX10O60683 326 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 GDF11O95390 407 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 CYP2E1P05181 493 aaPredicted RBP19.19■□□□□ 0.66
TSSC4-208ENST00000467308 RLBP1P12271 317 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 RGS2P41220 211 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 CACNB2Q08289 660 aaPredicted RBP19.19■□□□□ 0.66
TSSC4-208ENST00000467308 Q3C1V9 767 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 TNNI3KQ59H18 835 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 MORN1Q5T089 497 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 GPR142Q7Z601 462 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 CCAR1Q8IX12 1150 aaKnown RBP19.19■□□□□ 0.66
TSSC4-208ENST00000467308 EMILIN3Q9NT22 766 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 FPGT-TNNI3KV9GXZ4 949 aa19.19■□□□□ 0.66
TSSC4-208ENST00000467308 HLA-DOAP06340 250 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 POLA2Q14181 598 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 SHROOM1Q2M3G4 852 aaPredicted RBP19.18■□□□□ 0.66
TSSC4-208ENST00000467308 LHX8Q68G74 356 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 USP17L2Q6R6M4 530 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 DEFB123Q8N688 67 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 PANK1Q8TE04 598 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 APBA2Q99767 749 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 DBNDD2Q9BQY9 259 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 PORCNQ9H237 461 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 GTF3C3Q9Y5Q9 886 aa19.18■□□□□ 0.66
TSSC4-208ENST00000467308 MYH1P12882 1939 aa19.17■□□□□ 0.66
TSSC4-208ENST00000467308 POTEEQ6S8J3 1075 aa19.17■□□□□ 0.66
TSSC4-208ENST00000467308 PLEKHH3Q7Z736 793 aa19.17■□□□□ 0.66
TSSC4-208ENST00000467308 CERS3Q8IU89 383 aa19.17■□□□□ 0.66
TSSC4-208ENST00000467308 C12orf42Q96LP6 360 aa19.17■□□□□ 0.66
TSSC4-208ENST00000467308 UBE2OQ9C0C9 1292 aaKnown RBP19.17■□□□□ 0.66
TSSC4-208ENST00000467308 TNNQ9UQP3 1299 aa19.17■□□□□ 0.66
TSSC4-208ENST00000467308 DNAH12Q6ZR08 3092 aa19.16■□□□□ 0.66
TSSC4-208ENST00000467308 IRX6P78412 446 aaPredicted RBP19.16■□□□□ 0.66
TSSC4-208ENST00000467308 SSH3Q8TE77 659 aa19.16■□□□□ 0.66
TSSC4-208ENST00000467308 PAGR1Q9BTK6 254 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms