RNA–Protein interactions for RNA: ENST00000467216.2

COL21A1-207, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-207ENST00000467216 Q7L0L9 218 aa16.43■□□□□ 0.22
COL21A1-207ENST00000467216 PAGR1Q9BTK6 254 aa16.43■□□□□ 0.22
COL21A1-207ENST00000467216 GINM1Q9NU53 330 aa16.43■□□□□ 0.22
COL21A1-207ENST00000467216 AATFQ9NY61 560 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL21A1-207ENST00000467216 GLRX3O76003 335 aaKnown RBP16.42■□□□□ 0.22
COL21A1-207ENST00000467216 HLA-DOAP06340 250 aa16.42■□□□□ 0.22
COL21A1-207ENST00000467216 ARID4AP29374 1257 aaPredicted RBP16.42■□□□□ 0.22
COL21A1-207ENST00000467216 TTC39AQ5SRH9 613 aa16.42■□□□□ 0.22
COL21A1-207ENST00000467216 MAP3K21Q5TCX8 1036 aa16.42■□□□□ 0.22
COL21A1-207ENST00000467216 FOXP4Q8IVH2 680 aaPredicted RBP16.42■□□□□ 0.22
COL21A1-207ENST00000467216 MAPKAPK5Q8IW41 473 aa16.42■□□□□ 0.22
COL21A1-207ENST00000467216 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
COL21A1-207ENST00000467216 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
COL21A1-207ENST00000467216 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
COL21A1-207ENST00000467216 LBHD1Q9BQE6 289 aaPredicted RBP16.42■□□□□ 0.22
COL21A1-207ENST00000467216 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 GDF11O95390 407 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 ERVK-9P63128 1117 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 ERVK-24P63145 666 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 CCNA1P78396 465 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 CACNB2Q08289 660 aaPredicted RBP16.41■□□□□ 0.22
COL21A1-207ENST00000467216 RRP1BQ14684 758 aaKnown RBP16.41■□□□□ 0.22
COL21A1-207ENST00000467216 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 WDR78Q5VTH9 848 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 PLEKHH3Q7Z736 793 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 FEZ1Q99689 392 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 APBA2Q99767 749 aa16.41■□□□□ 0.22
COL21A1-207ENST00000467216 MCAMP43121 646 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
COL21A1-207ENST00000467216 MTX1Q13505 466 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 MFSD14CQ5VZR4 134 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 USP17L2Q6R6M4 530 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 GPR142Q7Z601 462 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 TXNRD2Q9NNW7 524 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 MTMR10Q9NXD2 777 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 PRKAG2Q9UGJ0 569 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 PFASO15067 1338 aa16.4■□□□□ 0.22
COL21A1-207ENST00000467216 DDX60LQ5H9U9 1706 aaKnown RBP16.39■□□□□ 0.21
COL21A1-207ENST00000467216 IPO8O15397 1037 aaKnown RBP16.39■□□□□ 0.21
COL21A1-207ENST00000467216 GNAI2P04899 355 aa16.39■□□□□ 0.21
COL21A1-207ENST00000467216 MDM2Q00987 491 aaPredicted RBP16.39■□□□□ 0.21
COL21A1-207ENST00000467216 ARHGAP45Q92619 1136 aa16.39■□□□□ 0.21
COL21A1-207ENST00000467216 SNRKQ9NRH2 765 aa16.39■□□□□ 0.21
COL21A1-207ENST00000467216 ZBTB21Q9ULJ3 1066 aa16.39■□□□□ 0.21
COL21A1-207ENST00000467216 FLT1P17948 1338 aa16.39■□□□□ 0.21
COL21A1-207ENST00000467216 PEX10O60683 326 aa16.38■□□□□ 0.21
COL21A1-207ENST00000467216 CCND3P30281 292 aaPredicted RBP16.38■□□□□ 0.21
COL21A1-207ENST00000467216 RBPJLQ9UBG7 517 aa16.38■□□□□ 0.21
COL21A1-207ENST00000467216 SAP30BPQ9UHR5 308 aaKnown RBP16.38■□□□□ 0.21
COL21A1-207ENST00000467216 PALD1Q9ULE6 856 aa16.38■□□□□ 0.21
COL21A1-207ENST00000467216 IVNS1ABPQ9Y6Y0 642 aa16.38■□□□□ 0.21
COL21A1-207ENST00000467216 ALPK3Q96L96 1907 aa16.38■□□□□ 0.21
COL21A1-207ENST00000467216 COL6A1P12109 1028 aa16.37■□□□□ 0.21
COL21A1-207ENST00000467216 CNGA1P29973 690 aa16.37■□□□□ 0.21
COL21A1-207ENST00000467216 PPP4CP60510 307 aa16.37■□□□□ 0.21
COL21A1-207ENST00000467216 MAP2K5Q13163 448 aa16.37■□□□□ 0.21
COL21A1-207ENST00000467216 ZYXQ15942 572 aaKnown RBP16.37■□□□□ 0.21
COL21A1-207ENST00000467216 CCL14Q16627 93 aa16.37■□□□□ 0.21
COL21A1-207ENST00000467216 LRRC26Q2I0M4 334 aa16.37■□□□□ 0.21
COL21A1-207ENST00000467216 EDC3Q96F86 508 aaKnown RBP16.37■□□□□ 0.21
COL21A1-207ENST00000467216 SENP6Q9GZR1 1112 aaPredicted RBP16.37■□□□□ 0.21
COL21A1-207ENST00000467216 PORCNQ9H237 461 aa16.37■□□□□ 0.21
COL21A1-207ENST00000467216 ATAD5Q96QE3 1844 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L15C9J2P7 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L13C9JLJ4 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L11C9JVI0 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L18D6R9N7 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L22D6RA61 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L17D6RBQ6 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L19D6RCP7 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L20D6RJB6 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 MSCO60682 206 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP5P45974 858 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP14P54578 494 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 ATP2B2Q01814 1243 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 USP17L24Q0WX57 530 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 Q3C1V9 767 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 MORN1Q5T089 497 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 RABGAP1Q9Y3P9 1069 aa16.36■□□□□ 0.21
COL21A1-207ENST00000467216 LAMA3Q16787 3333 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 IGSF3O75054 1194 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 GH2P01242 217 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
COL21A1-207ENST00000467216 RAB3GAP1Q15042 981 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 LHX8Q68G74 356 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
COL21A1-207ENST00000467216 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
COL21A1-207ENST00000467216 USP6NLQ92738 828 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 DNAJC18Q9H819 358 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 EMILIN3Q9NT22 766 aa16.35■□□□□ 0.21
COL21A1-207ENST00000467216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.35■□□□□ 0.21
COL21A1-207ENST00000467216 SLC15A5A6NIM6 579 aa16.34■□□□□ 0.21
COL21A1-207ENST00000467216 JAG1P78504 1218 aa16.34■□□□□ 0.21
COL21A1-207ENST00000467216 FRAT1Q92837 279 aaPredicted RBP16.34■□□□□ 0.21
COL21A1-207ENST00000467216 CABP5Q9NP86 173 aa16.34■□□□□ 0.21
COL21A1-207ENST00000467216 DDX20Q9UHI6 824 aaKnown RBP16.34■□□□□ 0.21
COL21A1-207ENST00000467216 NDUFB9Q9Y6M9 179 aa16.34■□□□□ 0.21
COL21A1-207ENST00000467216 CYP7A1P22680 504 aa16.33■□□□□ 0.2
COL21A1-207ENST00000467216 ATN1P54259 1190 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms