RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 MAPK4P31152 587 aa11.01□□□□□ -0.65
PTPDC1-203ENST00000467049 MCAMP43121 646 aa11.01□□□□□ -0.65
PTPDC1-203ENST00000467049 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
PTPDC1-203ENST00000467049 MTMR2Q13614 643 aa11.01□□□□□ -0.65
PTPDC1-203ENST00000467049 FOXP4Q8IVH2 680 aaPredicted RBP11.01□□□□□ -0.65
PTPDC1-203ENST00000467049 GPRC5AQ8NFJ5 357 aa11.01□□□□□ -0.65
PTPDC1-203ENST00000467049 LRP2BPQ9P2M1 347 aa11.01□□□□□ -0.65
PTPDC1-203ENST00000467049 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
PTPDC1-203ENST00000467049 CYP2B6P20813 491 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 HERVK_113P62684 666 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 G3BP1Q13283 466 aaKnown RBP eCLIP11□□□□□ -0.65
PTPDC1-203ENST00000467049 NAA16Q6N069 864 aaPredicted RBP11□□□□□ -0.65
PTPDC1-203ENST00000467049 USP6NLQ92738 828 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 P2RX7Q99572 595 aaKnown RBP11□□□□□ -0.65
PTPDC1-203ENST00000467049 GPR108Q9NPR9 543 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 USP17L10C9JJH3 530 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 GNAI2P04899 355 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 ZKSCAN1P17029 563 aaPredicted RBP11□□□□□ -0.65
PTPDC1-203ENST00000467049 MAGEA10P43363 369 aaPredicted RBP11□□□□□ -0.65
PTPDC1-203ENST00000467049 PDE3AQ14432 1141 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 DNAJC18Q9H819 358 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 TXNRD2Q9NNW7 524 aa11□□□□□ -0.65
PTPDC1-203ENST00000467049 PFASO15067 1338 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 FLT1P17948 1338 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 COL6A1P12109 1028 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 RGS2P41220 211 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 ERVK-9P63128 1117 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 ERVK-24P63145 666 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 MORN1Q5T089 497 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 TDHQ8IZJ6 230 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 TRIM34Q9BYJ4 488 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 AATFQ9NY61 560 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 RBPJLQ9UBG7 517 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 ZBTB21Q9ULJ3 1066 aa10.99□□□□□ -0.65
PTPDC1-203ENST00000467049 IPO8O15397 1037 aaKnown RBP10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 JAG1P78504 1218 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 USP17L2Q6R6M4 530 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 MAPKAPK5Q8IW41 473 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 CRACR2BQ8N4Y2 399 aaPredicted RBP10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 TGFBRAP1Q8WUH2 860 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 ZNF512BQ96KM6 892 aaPredicted RBP10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 C12orf42Q96LP6 360 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 APBA2Q99767 749 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 STXBP5LQ9Y2K9 1186 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 ZNF236Q9UL36 1845 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 PNMA6EA0A0J9YXQ4 647 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 SYN1P17600 705 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 CACNB2Q08289 660 aaPredicted RBP10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 TTC39AQ5SRH9 613 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 ATF7IPQ6VMQ6 1270 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 PLEKHH3Q7Z736 793 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 DEFB123Q8N688 67 aa10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 UBE2OQ9C0C9 1292 aaKnown RBP10.98□□□□□ -0.65
PTPDC1-203ENST00000467049 LTBP2Q14767 1821 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 TNNI3KQ59H18 835 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 CCDC158Q5M9N0 1113 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 LHX8Q68G74 356 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 GPR142Q7Z601 462 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 CERS3Q8IU89 383 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 CCAR1Q8IX12 1150 aaKnown RBP10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 PORCNQ9H237 461 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 EMILIN3Q9NT22 766 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 FPGT-TNNI3KV9GXZ4 949 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 NAV1Q8NEY1 1877 aa10.97□□□□□ -0.65
PTPDC1-203ENST00000467049 RLFQ13129 1914 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 GLRX3O76003 335 aaKnown RBP10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 GDF11O95390 407 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 TRIM27P14373 513 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 CCND3P30281 292 aaPredicted RBP10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 MAP2K5Q13163 448 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 POLA2Q14181 598 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 Q3C1V9 767 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 ADGRA1Q86SQ6 560 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 SNRKQ9NRH2 765 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 MTMR10Q9NXD2 777 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 PALD1Q9ULE6 856 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 RABGAP1Q9Y3P9 1069 aa10.96□□□□□ -0.65
PTPDC1-203ENST00000467049 PEX10O60683 326 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 CYP2E1P05181 493 aaPredicted RBP10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 CCNA1P78396 465 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 LRRC26Q2I0M4 334 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 SHROOM1Q2M3G4 852 aaPredicted RBP10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 DBNDD2Q9BQY9 259 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 PAGR1Q9BTK6 254 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 MYH8P13535 1937 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 A0A0G2JMZ2 1700 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 SLC15A5A6NIM6 579 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L15C9J2P7 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L13C9JLJ4 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L11C9JVI0 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L18D6R9N7 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L22D6RA61 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L17D6RBQ6 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L19D6RCP7 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L20D6RJB6 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 CNMDO75829 334 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP14P54578 494 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 USP17L24Q0WX57 530 aa10.95□□□□□ -0.66
PTPDC1-203ENST00000467049 CCL14Q16627 93 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms