RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 HERVK_113Q902F9 699 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 ASCC2Q9H1I8 757 aaPredicted RBP7.07□□□□□ -1.28
CXXC4-202ENST00000466963 GPR108Q9NPR9 543 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 IVNS1ABPQ9Y6Y0 642 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 UTRNP46939 3433 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 FDX1P10109 184 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 COL9A1P20849 921 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 PTPREP23469 700 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 KLRK1P26718 216 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 GRB14Q14449 540 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 RTL5Q5HYW3 569 aaPredicted RBP7.07□□□□□ -1.28
CXXC4-202ENST00000466963 ANKRD33Q7Z3H0 272 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 EDC3Q96F86 508 aaKnown RBP7.07□□□□□ -1.28
CXXC4-202ENST00000466963 CEP126Q9P2H0 1117 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 ADAMTS8Q9UP79 889 aa7.07□□□□□ -1.28
CXXC4-202ENST00000466963 PFASO15067 1338 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 TNKSO95271 1327 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 TLR3O15455 904 aaKnown RBP7.06□□□□□ -1.28
CXXC4-202ENST00000466963 SEPT4O43236 478 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 PARNO95453 639 aaKnown RBP7.06□□□□□ -1.28
CXXC4-202ENST00000466963 HLA-DOAP06340 250 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 CST5P28325 142 aaPredicted RBP7.06□□□□□ -1.28
CXXC4-202ENST00000466963 RFC2P35250 354 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 ALDH1L2Q3SY69 923 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 ZNF467Q7Z7K2 595 aaPredicted RBP7.06□□□□□ -1.28
CXXC4-202ENST00000466963 MAGEB6Q8N7X4 407 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 CWC22Q9HCG8 908 aaKnown RBP7.06□□□□□ -1.28
CXXC4-202ENST00000466963 PNMA2Q9UL42 364 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 MYH2Q9UKX2 1941 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 KIAA0100Q14667 2235 aaKnown RBP7.06□□□□□ -1.28
CXXC4-202ENST00000466963 ELP1O95163 1332 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 USP17L10C9JJH3 530 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 VAMP4O75379 141 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 RTP1P59025 263 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 ERVK-9P63128 1117 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 ERVK-24P63145 666 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 DZIP1Q86YF9 867 aaKnown RBP7.06□□□□□ -1.28
CXXC4-202ENST00000466963 ASB2Q96Q27 587 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 KIAA1683Q9H0B3 1180 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 SMC4Q9NTJ3 1288 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 HOXC10Q9NYD6 342 aa7.06□□□□□ -1.28
CXXC4-202ENST00000466963 COL11A1P12107 1806 aaPredicted RBP7.06□□□□□ -1.28
CXXC4-202ENST00000466963 TAF5LO75529 589 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 GYG1P46976 350 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 RGS3P49796 1198 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 HERVK_113P62684 666 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 RASIP1Q5U651 963 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 SLC39A5Q6ZMH5 540 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 ERICH6Q7L0X2 663 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 MSRAQ9UJ68 235 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 GPR37L1O60883 481 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 ATP2B2Q01814 1243 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 KRT24Q2M2I5 525 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 PPP4R3BQ5MIZ7 849 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 RNF180Q86T96 592 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 NUP133Q8WUM0 1156 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 TRIM34Q9BYJ4 488 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 CHMP3Q9Y3E7 222 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 ABCB7O75027 752 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 FPGSQ05932 587 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 CACNB2Q08289 660 aaPredicted RBP7.05□□□□□ -1.28
CXXC4-202ENST00000466963 GPR142Q7Z601 462 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 ANKRD13CQ8N6S4 541 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 TRIB2Q92519 343 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 COPRSQ9NQ92 184 aa7.05□□□□□ -1.28
CXXC4-202ENST00000466963 CYBAP13498 195 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 ELNP15502 786 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 LRRC26Q2I0M4 334 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 PCSK9Q8NBP7 692 aaKnown RBP7.04□□□□□ -1.28
CXXC4-202ENST00000466963 ZMYND8Q9ULU4 1186 aaPredicted RBP7.04□□□□□ -1.28
CXXC4-202ENST00000466963 FAM50BQ9Y247 325 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 CLTBP09497 229 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 CYP2C8P10632 490 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 ATP2B3Q16720 1220 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 TMEM199Q8N511 208 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 PHOSPHO2Q8TCD6 241 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 CCDC85AQ96PX6 553 aaPredicted RBP7.04□□□□□ -1.28
CXXC4-202ENST00000466963 AK9Q5TCS8 1911 aa7.04□□□□□ -1.28
CXXC4-202ENST00000466963 APAF1O14727 1248 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 CHAF1AQ13111 956 aaPredicted RBP7.03□□□□□ -1.28
CXXC4-202ENST00000466963 MTX1Q13505 466 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 TATDN1Q6P1N9 297 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 P2RX7Q99572 595 aaKnown RBP7.03□□□□□ -1.28
CXXC4-202ENST00000466963 RPUSD2Q8IZ73 545 aaKnown RBP7.03□□□□□ -1.28
CXXC4-202ENST00000466963 Q9Y3F1 56 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 A0A1B0GUL7 405 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 ERC2O15083 957 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 TTC6Q86TZ1 520 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 SIL1Q9H173 461 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 SPC25Q9HBM1 224 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 PDLIM7Q9NR12 457 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 PCDHA11Q9Y5I1 949 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 COL4A6Q14031 1691 aa7.03□□□□□ -1.28
CXXC4-202ENST00000466963 NCK2O43639 380 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 EFCAB14O75071 495 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 ARID4AP29374 1257 aaPredicted RBP7.02□□□□□ -1.29
CXXC4-202ENST00000466963 ZSCAN29Q8IWY8 852 aaPredicted RBP7.02□□□□□ -1.29
CXXC4-202ENST00000466963 ANKRD44Q8N8A2 993 aa7.02□□□□□ -1.29
CXXC4-202ENST00000466963 RNPC3Q96LT9 517 aaKnown RBP7.02□□□□□ -1.29
CXXC4-202ENST00000466963 SWAP70Q9UH65 585 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms