RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 HDXQ7Z353 690 aa7.38□□□□□ -1.23
LRCH3-212ENST00000466845 NETO1Q8TDF5 533 aa7.38□□□□□ -1.23
LRCH3-212ENST00000466845 SREK1Q8WXA9 508 aaKnown RBP7.38□□□□□ -1.23
LRCH3-212ENST00000466845 DUSP9Q99956 384 aaKnown RBP7.38□□□□□ -1.23
LRCH3-212ENST00000466845 UBA5Q9GZZ9 404 aa7.38□□□□□ -1.23
LRCH3-212ENST00000466845 LGR6Q9HBX8 967 aa7.38□□□□□ -1.23
LRCH3-212ENST00000466845 KIAA1522Q9P206 1035 aaPredicted RBP7.38□□□□□ -1.23
LRCH3-212ENST00000466845 RPS6KL1Q9Y6S9 549 aa7.38□□□□□ -1.23
LRCH3-212ENST00000466845 RAB11FIP3O75154 756 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 ADAMTS4O75173 837 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 PPFIA4O75335 1185 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 FOXD4Q12950 439 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-212ENST00000466845 ELMO3Q96BJ8 720 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 MTA3Q9BTC8 594 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 DUSP23Q9BVJ7 150 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 GTF2IRD1Q9UHL9 959 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 VAV3Q9UKW4 847 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 SLC5A6Q9Y289 635 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 PEG3Q9GZU2 1588 aa7.37□□□□□ -1.23
LRCH3-212ENST00000466845 IGF2BP3O00425 579 aaKnown RBP eCLIP7.36□□□□□ -1.23
LRCH3-212ENST00000466845 FBXO24O75426 580 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 ST13P50502 369 aaKnown RBP7.36□□□□□ -1.23
LRCH3-212ENST00000466845 DAB2P98082 770 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 XPCQ01831 940 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-212ENST00000466845 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 CCDC85BQ15834 202 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-212ENST00000466845 ZBTB37Q5TC79 503 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 TTBK2Q6IQ55 1244 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 DNAJC14Q6Y2X3 702 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-212ENST00000466845 TP53INP2Q8IXH6 220 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 MORC4Q8TE76 937 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 NOC4LQ9BVI4 516 aaKnown RBP7.36□□□□□ -1.23
LRCH3-212ENST00000466845 KRTAP4-8Q9BYQ9 185 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 SNX11Q9Y5W9 270 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 MROH2BQ7Z745 1585 aa7.36□□□□□ -1.23
LRCH3-212ENST00000466845 TMEM265A0A087WTH1 108 aa7.35□□□□□ -1.23
LRCH3-212ENST00000466845 RBM47A0AV96 593 aaKnown RBP7.35□□□□□ -1.23
LRCH3-212ENST00000466845 CELA3AP09093 270 aa7.35□□□□□ -1.23
LRCH3-212ENST00000466845 PSMD2Q13200 908 aa7.35□□□□□ -1.23
LRCH3-212ENST00000466845 IFI16Q16666 785 aaKnown RBP7.35□□□□□ -1.23
LRCH3-212ENST00000466845 PPM1JQ5JR12 505 aa7.35□□□□□ -1.23
LRCH3-212ENST00000466845 ARHGAP27Q6ZUM4 889 aa7.35□□□□□ -1.23
LRCH3-212ENST00000466845 TMC4Q7Z404 712 aa7.35□□□□□ -1.23
LRCH3-212ENST00000466845 NPAS4Q8IUM7 802 aa7.35□□□□□ -1.23
LRCH3-212ENST00000466845 ADGRE2Q9UHX3 823 aa7.35□□□□□ -1.23
LRCH3-212ENST00000466845 TTC36A6NLP5 189 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 LRIG2O94898 1065 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 MAP4K4O95819 1239 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-212ENST00000466845 TAL1P17542 331 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-212ENST00000466845 CAP2P40123 477 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 TXKP42681 527 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 PRKCQQ04759 706 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 TAF1CQ15572 869 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-212ENST00000466845 LONRF3Q496Y0 759 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 CYFIP1Q7L576 1253 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 SDR16C5Q8N3Y7 309 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 FLCNQ8NFG4 579 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 YTHDC1Q96MU7 727 aaKnown RBP7.34□□□□□ -1.23
LRCH3-212ENST00000466845 PARP2Q9UGN5 583 aa7.34□□□□□ -1.23
LRCH3-212ENST00000466845 CUX2O14529 1486 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 DCDC2CA8MYV0 355 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 PEX14O75381 377 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 NTF4P34130 210 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 GIMAP6Q6P9H5 292 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 MPRIPQ6WCQ1 1025 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 AGMOQ6ZNB7 445 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 KRBA2Q6ZNG9 492 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 MFSD2AQ8NA29 543 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 BCL7CQ8WUZ0 217 aaPredicted RBP7.33□□□□□ -1.24
LRCH3-212ENST00000466845 WNT10AQ9GZT5 417 aa7.33□□□□□ -1.24
LRCH3-212ENST00000466845 HMGB1P1B2RPK0 211 aaPredicted RBP7.32□□□□□ -1.24
LRCH3-212ENST00000466845 CCER2I3L3R5 266 aa7.32□□□□□ -1.24
LRCH3-212ENST00000466845 OXCT1P55809 520 aa7.32□□□□□ -1.24
LRCH3-212ENST00000466845 CCDC84Q86UT8 332 aaPredicted RBP7.32□□□□□ -1.24
LRCH3-212ENST00000466845 ABI1Q8IZP0 508 aa7.32□□□□□ -1.24
LRCH3-212ENST00000466845 TOP6BLQ8N6T0 577 aa7.32□□□□□ -1.24
LRCH3-212ENST00000466845 PAK6Q9NQU5 681 aaPredicted RBP7.32□□□□□ -1.24
LRCH3-212ENST00000466845 USP31Q70CQ4 1352 aa7.32□□□□□ -1.24
LRCH3-212ENST00000466845 NESP48681 1621 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 CEACAM5P06731 702 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 CNGB1Q14028 1251 aaPredicted RBP7.31□□□□□ -1.24
LRCH3-212ENST00000466845 CCDC96Q2M329 555 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 AXDND1Q5T1B0 1012 aaPredicted RBP7.31□□□□□ -1.24
LRCH3-212ENST00000466845 RASIP1Q5U651 963 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 ZNF746Q6NUN9 644 aaPredicted RBP7.31□□□□□ -1.24
LRCH3-212ENST00000466845 LRFN4Q6PJG9 635 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 CBLL1Q75N03 491 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 HID1Q8IV36 788 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 SMC5Q8IY18 1101 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.31□□□□□ -1.24
LRCH3-212ENST00000466845 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 HRASLS5Q96KN8 279 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 C8orf37Q96NL8 207 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 FMNL2Q96PY5 1086 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 MIR1-1HGQ9H1L0 117 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 CSADQ9Y600 493 aa7.31□□□□□ -1.24
LRCH3-212ENST00000466845 LAMC3Q9Y6N6 1575 aa7.3□□□□□ -1.24
LRCH3-212ENST00000466845 SORBS3O60504 671 aa7.3□□□□□ -1.24
LRCH3-212ENST00000466845 LEFTY1O75610 366 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms