RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 ASNSP08243 561 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 JAG1P78504 1218 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 EVX2Q03828 476 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 CCL15Q16663 113 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 TTC22Q5TAA0 569 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 CTR9Q6PD62 1173 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 PRRT2Q7Z6L0 340 aaPredicted RBP11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 CRACR2BQ8N4Y2 399 aaPredicted RBP11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 SEC62Q99442 399 aaKnown RBP11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 WDR18Q9BV38 432 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 EPB41L4AQ9HCS5 686 aaPredicted RBP11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 SWAP70Q9UH65 585 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 ZHX2Q9Y6X8 837 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 ROBO3Q96MS0 1386 aa11.37□□□□□ -0.59
SDCCAG3-208ENST00000466579 USP17L5A8MUK1 530 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 USP17L21D6R901 530 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 CYP2D6P10635 497 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 GSPT1P15170 499 aaKnown RBP11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 SDSP20132 328 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 LBX1P52954 281 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 OTUD7BQ6GQQ9 843 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 C16orf86Q6ZW13 317 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 DDRGK1Q96HY6 314 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 TRIM34Q9BYJ4 488 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 ARPP21Q9UBL0 812 aaPredicted RBP11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 ZBTB21Q9ULJ3 1066 aa11.36□□□□□ -0.59
SDCCAG3-208ENST00000466579 GREB1LQ9C091 1923 aaPredicted RBP11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 A0A0D9SFI3 127 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 TRIM6-TRIM34B2RNG4 842 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 BTBD19C9JJ37 291 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 ALX1Q15699 326 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 SLC4A8Q2Y0W8 1093 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 CERKLQ49MI3 558 aaPredicted RBP11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 MCMDC2Q4G0Z9 681 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 SH3D19Q5HYK7 790 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 GPAT2Q6NUI2 795 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 ANKRD23Q86SG2 305 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 IFNL3Q8IZI9 196 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 FAM43AQ8N2R8 423 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 ZNF280CQ8ND82 737 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 FAM227BQ96M60 508 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 SLC45A1Q9Y2W3 748 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 CASP8AP2Q9UKL3 1982 aa11.35□□□□□ -0.59
SDCCAG3-208ENST00000466579 CYP2D7A0A087X1C5 515 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 SMIM22K7EJ46 135 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 HIP1O00291 1037 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 GUCY1A2P33402 732 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 NMIQ13287 307 aaPredicted RBP11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 SHROOM1Q2M3G4 852 aaPredicted RBP11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 FASTKD5Q7L8L6 764 aaKnown RBP11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 CCDC84Q86UT8 332 aaPredicted RBP11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 AMOTL1Q8IY63 956 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 RILPL2Q969X0 211 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 DYNLL2Q96FJ2 89 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 R3HDMLQ9H3Y0 253 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 TSKSQ9UJT2 592 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 ZMYM6O95789 1325 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 ADGRA2Q96PE1 1338 aa11.34□□□□□ -0.59
SDCCAG3-208ENST00000466579 GDF11O95390 407 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 TBC1D8O95759 1140 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 GH2P01242 217 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 NEFLP07196 543 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 CDK8P49336 464 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 BACE1P56817 501 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 SPP2Q13103 211 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 CRHR2Q13324 411 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 ABCB5Q2M3G0 1257 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 CCDC129Q6ZRS4 1044 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 ZNF589Q86UQ0 364 aaPredicted RBP11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 SLC44A5Q8NCS7 719 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 CCDC17Q96LX7 622 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 NACAP1Q9BZK3 213 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 CCDC171Q6TFL3 1326 aa11.33□□□□□ -0.6
SDCCAG3-208ENST00000466579 TRIM75PA6NK02 468 aa11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 C19orf81C9J6K1 198 aa11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 GPR25O00155 361 aa11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 VPS53Q5VIR6 699 aa11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 ANAPC4Q9UJX5 808 aa11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
SDCCAG3-208ENST00000466579 USP17L10C9JJH3 530 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 PDHXO00330 501 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 TLR2O60603 784 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 APPP05067 770 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 FGRP09769 529 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 HSPD1P10809 573 aaKnown RBP11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 AKR1B1P15121 316 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 RASA1P20936 1047 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 TDO2P48775 406 aa11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 MFAP1P55081 439 aaKnown RBP11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 TAF1CQ15572 869 aaPredicted RBP11.31□□□□□ -0.6
SDCCAG3-208ENST00000466579 ZNF296Q8WUU4 475 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms