RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 TNKSO95271 1327 aa22.19■■□□□ 1.14
LIMS2-212ENST00000466410 HOMER1Q86YM7 354 aa22.19■■□□□ 1.14
LIMS2-212ENST00000466410 DDX41Q9UJV9 622 aaKnown RBP22.19■■□□□ 1.14
LIMS2-212ENST00000466410 SRPRBQ9Y5M8 271 aaKnown RBP22.19■■□□□ 1.14
LIMS2-212ENST00000466410 MYO1BO43795 1136 aa22.19■■□□□ 1.14
LIMS2-212ENST00000466410 NT5DC1Q5TFE4 455 aa22.19■■□□□ 1.14
LIMS2-212ENST00000466410 LRRN4CLQ8ND94 238 aa22.19■■□□□ 1.14
LIMS2-212ENST00000466410 ZNF397Q8NF99 534 aaPredicted RBP22.19■■□□□ 1.14
LIMS2-212ENST00000466410 GYG1P46976 350 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 SARSP49591 514 aaKnown RBP22.18■■□□□ 1.14
LIMS2-212ENST00000466410 RCAN1P53805 252 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 ITPK1Q13572 414 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 RAI14Q9P0K7 980 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 PHLPP1O60346 1717 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 RTL9Q8NET4 1388 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 MYH6P13533 1939 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 BCL9LQ86UU0 1499 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 FAM205CA6NFA0 338 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 NPHP1O15259 732 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 CCDC93Q567U6 631 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 ZNF579Q8NAF0 562 aaKnown RBP22.18■■□□□ 1.14
LIMS2-212ENST00000466410 SMARCE1Q969G3 411 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 CSRNP2Q9H175 543 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 NFE2L3Q9Y4A8 694 aa22.18■■□□□ 1.14
LIMS2-212ENST00000466410 MYH14Q7Z406 1995 aaKnown RBP22.17■■□□□ 1.14
LIMS2-212ENST00000466410 LOC102724428A0A0B4J2F2 783 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 MAGEB6P1A0A0J9YX57 407 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 SIK1P57059 783 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 ETF1P62495 437 aaKnown RBP22.17■■□□□ 1.14
LIMS2-212ENST00000466410 FBXO38Q6PIJ6 1188 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 TRMT44Q8IYL2 757 aaKnown RBP22.17■■□□□ 1.14
LIMS2-212ENST00000466410 ESR2Q92731 530 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 hCG_1642624A0A1W2PR95 340 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 ACTN4O43707 911 aaKnown RBP22.17■■□□□ 1.14
LIMS2-212ENST00000466410 MORC3Q14149 939 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 VPS54Q9P1Q0 977 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 MYH2Q9UKX2 1941 aa22.17■■□□□ 1.14
LIMS2-212ENST00000466410 MLKLQ8NB16 471 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 MED15Q96RN5 788 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 RNF26Q9BY78 433 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-212ENST00000466410 ANAPC4Q9UJX5 808 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 CYP2D7A0A087X1C5 515 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 ZNF18P17022 549 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 PKN1Q16512 942 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 TRIM65Q6PJ69 517 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 TMEM139Q8IV31 216 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 ENAHQ8N8S7 591 aaPredicted RBP22.16■■□□□ 1.14
LIMS2-212ENST00000466410 DNAI1Q9UI46 699 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 ZNF804BA4D1E1 1349 aa22.16■■□□□ 1.14
LIMS2-212ENST00000466410 EARS2Q5JPH6 523 aaKnown RBP22.15■■□□□ 1.14
LIMS2-212ENST00000466410 REXO1L1PQ8IX06 675 aa22.15■■□□□ 1.14
LIMS2-212ENST00000466410 RIOK1Q9BRS2 568 aaKnown RBP22.15■■□□□ 1.14
LIMS2-212ENST00000466410 CEP131Q9UPN4 1083 aa22.15■■□□□ 1.14
LIMS2-212ENST00000466410 PRDM1O75626 825 aa22.15■■□□□ 1.14
LIMS2-212ENST00000466410 DYNLL1P63167 89 aaKnown RBP22.15■■□□□ 1.14
LIMS2-212ENST00000466410 ERCC6LQ2NKX8 1250 aa22.15■■□□□ 1.14
LIMS2-212ENST00000466410 UTP14CQ5TAP6 766 aaKnown RBP22.15■■□□□ 1.14
LIMS2-212ENST00000466410 COL1A1P02452 1464 aaPredicted RBP22.15■■□□□ 1.14
LIMS2-212ENST00000466410 FANCGO15287 622 aa22.14■■□□□ 1.14
LIMS2-212ENST00000466410 CCP110O43303 1012 aa22.14■■□□□ 1.14
LIMS2-212ENST00000466410 TUBB4AP04350 444 aa22.14■■□□□ 1.14
LIMS2-212ENST00000466410 TBX2Q13207 712 aaPredicted RBP22.14■■□□□ 1.14
LIMS2-212ENST00000466410 ENOX1Q8TC92 643 aaKnown RBP22.14■■□□□ 1.14
LIMS2-212ENST00000466410 CDK11BP21127 795 aaKnown RBP22.14■■□□□ 1.13
LIMS2-212ENST00000466410 AKAP17AQ02040 695 aaKnown RBP22.14■■□□□ 1.13
LIMS2-212ENST00000466410 FUT2Q10981 343 aa22.14■■□□□ 1.13
LIMS2-212ENST00000466410 ZSCAN10Q96SZ4 725 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-212ENST00000466410 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.14■■□□□ 1.13
LIMS2-212ENST00000466410 MORC2Q9Y6X9 1032 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-212ENST00000466410 BAZ2AQ9UIF9 1905 aaKnown RBP22.14■■□□□ 1.13
LIMS2-212ENST00000466410 A0A087X0B3 334 aa22.13■■□□□ 1.13
LIMS2-212ENST00000466410 C3orf67Q6ZVT6 689 aa22.13■■□□□ 1.13
LIMS2-212ENST00000466410 CDC5LQ99459 802 aaKnown RBP22.13■■□□□ 1.13
LIMS2-212ENST00000466410 SAMSN1Q9NSI8 373 aaKnown RBP22.13■■□□□ 1.13
LIMS2-212ENST00000466410 CICQ96RK0 1608 aaPredicted RBP22.13■■□□□ 1.13
LIMS2-212ENST00000466410 NRAPQ86VF7 1730 aa22.13■■□□□ 1.13
LIMS2-212ENST00000466410 TRIM75PA6NK02 468 aa22.13■■□□□ 1.13
LIMS2-212ENST00000466410 PLEKHA8P1O95397 391 aa22.13■■□□□ 1.13
LIMS2-212ENST00000466410 SPATA20Q8TB22 786 aa22.13■■□□□ 1.13
LIMS2-212ENST00000466410 EPSTI1Q96J88 318 aa22.13■■□□□ 1.13
LIMS2-212ENST00000466410 DACH1Q9UI36 760 aa22.13■■□□□ 1.13
LIMS2-212ENST00000466410 DDB1Q16531 1140 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 TRIML1Q8N9V2 468 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 DHX58Q96C10 678 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 PHF20Q9BVI0 1012 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 V9GY48 417 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-212ENST00000466410 PHLPP2Q6ZVD8 1323 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 TAF1P21675 1872 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 NUTM2BA6NNL0 878 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-212ENST00000466410 NUTM2EB1AL46 878 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-212ENST00000466410 WNT7AO00755 349 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 PPP2R5BQ15173 497 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 KANK3Q6NY19 840 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 NUTM2AQ8IVF1 878 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-212ENST00000466410 ZNF384Q8TF68 577 aa22.12■■□□□ 1.13
LIMS2-212ENST00000466410 GTPBP4Q9BZE4 634 aaKnown RBP22.12■■□□□ 1.13
LIMS2-212ENST00000466410 GNL3LQ9NVN8 582 aaKnown RBP22.12■■□□□ 1.13
LIMS2-212ENST00000466410 CACNA1SQ13698 1873 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 ARHGAP6O43182 974 aa22.11■■□□□ 1.13
LIMS2-212ENST00000466410 IFIT1BQ5T764 474 aaKnown RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms