RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 EARS2Q5JPH6 523 aaKnown RBP11.96□□□□□ -0.5
UFD1-206ENST00000466373 TBC1D9BQ66K14 1250 aa11.96□□□□□ -0.5
UFD1-206ENST00000466373 E4F1Q66K89 784 aaPredicted RBP11.96□□□□□ -0.5
UFD1-206ENST00000466373 NYAP1Q6ZVC0 841 aa11.96□□□□□ -0.5
UFD1-206ENST00000466373 TMTC2Q8N394 836 aa11.96□□□□□ -0.5
UFD1-206ENST00000466373 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.5
UFD1-206ENST00000466373 AATFQ9NY61 560 aaKnown RBP eCLIP11.96□□□□□ -0.5
UFD1-206ENST00000466373 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.5
UFD1-206ENST00000466373 USP17L12C9JPN9 530 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 USP17L21D6R901 530 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 IKBKBO14920 756 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 CBX1P83916 185 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 IFIT1BQ5T764 474 aaKnown RBP11.95□□□□□ -0.5
UFD1-206ENST00000466373 TRMT44Q8IYL2 757 aaKnown RBP11.95□□□□□ -0.5
UFD1-206ENST00000466373 ZSCAN10Q96SZ4 725 aaPredicted RBP11.95□□□□□ -0.5
UFD1-206ENST00000466373 FOXP1Q9H334 677 aaPredicted RBP11.95□□□□□ -0.5
UFD1-206ENST00000466373 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
UFD1-206ENST00000466373 ZNF804BA4D1E1 1349 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 PTPREP23469 700 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 NOM1Q5C9Z4 860 aaKnown RBP11.95□□□□□ -0.5
UFD1-206ENST00000466373 FAM47AQ5JRC9 791 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 PRDM10Q9NQV6 1147 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 PLCH1Q4KWH8 1693 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 EP400Q96L91 3159 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 BCL9LQ86UU0 1499 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 RTL9Q8NET4 1388 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 UBE4AQ14139 1066 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 POSTNQ15063 836 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 CSRNP2Q9H175 543 aa11.95□□□□□ -0.5
UFD1-206ENST00000466373 BSDC1Q9NW68 430 aaPredicted RBP11.95□□□□□ -0.5
UFD1-206ENST00000466373 THRAP3Q9Y2W1 955 aaKnown RBP11.95□□□□□ -0.5
UFD1-206ENST00000466373 SPATA31A5Q5VU36 1347 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 SPATA31A7Q8IWB4 1347 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 FAM237AA0A1B0GTK4 181 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 CASP1P29466 404 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 ANKRD7Q92527 254 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 MAN1B1Q9UKM7 699 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 BCORQ6W2J9 1755 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 WNT7AO00755 349 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 NPHP1O15259 732 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
UFD1-206ENST00000466373 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
UFD1-206ENST00000466373 FAM182BQ5T319 152 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 CTR9Q6PD62 1173 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 CATIPQ7Z7H3 387 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 RGS22Q8NE09 1264 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 ZNF215Q9UL58 517 aaPredicted RBP11.94□□□□□ -0.5
UFD1-206ENST00000466373 CICQ96RK0 1608 aaPredicted RBP11.94□□□□□ -0.5
UFD1-206ENST00000466373 MYH6P13533 1939 aa11.94□□□□□ -0.5
UFD1-206ENST00000466373 TIAM2Q8IVF5 1701 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 CYP2D6P10635 497 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 PRDX5P30044 214 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 PKN1Q16512 942 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 IQCA1Q86XH1 822 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 DHX58Q96C10 678 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 EPSTI1Q96J88 318 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 PPP1R13BQ96KQ4 1090 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 AFMP43652 599 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 MECOMQ03112 1051 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 SF3B3Q15393 1217 aaKnown RBP11.93□□□□□ -0.5
UFD1-206ENST00000466373 CLEC4GQ6UXB4 293 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 WNK3Q9BYP7 1800 aa11.93□□□□□ -0.5
UFD1-206ENST00000466373 CDK11BP21127 795 aaKnown RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 SYT10Q6XYQ8 523 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 SMARCC1Q92922 1105 aaPredicted RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 SMARCE1Q969G3 411 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 RNF26Q9BY78 433 aaPredicted RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 ZMYND15Q9H091 742 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 NFE2L3Q9Y4A8 694 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 NID2Q14112 1375 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 RPS8P62241 208 aaKnown RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 TROAPQ12815 778 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 ZNF174Q15697 407 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 NBPF5PQ86XG9 351 aaPredicted RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 KIF18AQ8NI77 898 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 HOOK1Q9UJC3 728 aaKnown RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 ANAPC4Q9UJX5 808 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 SRPRBQ9Y5M8 271 aaKnown RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 MYH13Q9UKX3 1938 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 A0A087X0B3 334 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 TRIM75PA6NK02 468 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 TOP1P11387 765 aaKnown RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 VEGFAP15692 232 aaPredicted RBP11.92□□□□□ -0.5
UFD1-206ENST00000466373 KLHL10Q6JEL2 608 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 HOMER1Q86YM7 354 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 STAMQ92783 540 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 INTS13Q9NVM9 706 aa11.92□□□□□ -0.5
UFD1-206ENST00000466373 XBP1P17861 261 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 KRT2P35908 639 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 FUT2Q10981 343 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 CACNA1SQ13698 1873 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 MTMR7Q9Y216 660 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 NRDCO43847 1150 aa11.91□□□□□ -0.5
UFD1-206ENST00000466373 HIBADHP31937 336 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms