RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 UBE3BQ7Z3V4 1068 aa11.98□□□□□ -0.49
APP-213ENST00000464867 ATXN2LQ8WWM7 1075 aaKnown RBP11.98□□□□□ -0.49
APP-213ENST00000464867 BLOC1S3Q6QNY0 202 aa11.97□□□□□ -0.49
APP-213ENST00000464867 ANKRD13CQ8N6S4 541 aa11.97□□□□□ -0.49
APP-213ENST00000464867 PICK1Q9NRD5 415 aa11.97□□□□□ -0.49
APP-213ENST00000464867 PCDHB3Q9Y5E6 796 aa11.97□□□□□ -0.49
APP-213ENST00000464867 PLIN1O60240 522 aa11.96□□□□□ -0.49
APP-213ENST00000464867 COL6A1P12109 1028 aa11.96□□□□□ -0.49
APP-213ENST00000464867 HIBADHP31937 336 aaKnown RBP11.96□□□□□ -0.49
APP-213ENST00000464867 NOL9Q5SY16 702 aaKnown RBP11.96□□□□□ -0.49
APP-213ENST00000464867 TDRD7Q8NHU6 1098 aaKnown RBP11.96□□□□□ -0.49
APP-213ENST00000464867 ADAMTS19Q8TE59 1207 aa11.96□□□□□ -0.49
APP-213ENST00000464867 PRR14Q9BWN1 585 aa11.96□□□□□ -0.49
APP-213ENST00000464867 TTYH1Q9H313 450 aaPredicted RBP11.96□□□□□ -0.49
APP-213ENST00000464867 ZNF112Q9UJU3 913 aa11.96□□□□□ -0.49
APP-213ENST00000464867 ZHX2Q9Y6X8 837 aa11.96□□□□□ -0.49
APP-213ENST00000464867 CDH23Q9H251 3354 aa11.96□□□□□ -0.5
APP-213ENST00000464867 RPAP1Q9BWH6 1393 aaPredicted RBP11.95□□□□□ -0.5
APP-213ENST00000464867 A0A0G2JLL6 359 aaPredicted RBP11.95□□□□□ -0.5
APP-213ENST00000464867 H7C1W4 665 aa11.95□□□□□ -0.5
APP-213ENST00000464867 FRAT2O75474 233 aaPredicted RBP11.95□□□□□ -0.5
APP-213ENST00000464867 IGKV5-2P06315 115 aa11.95□□□□□ -0.5
APP-213ENST00000464867 CFHP08603 1231 aa11.95□□□□□ -0.5
APP-213ENST00000464867 IFIT5Q13325 482 aaKnown RBP11.95□□□□□ -0.5
APP-213ENST00000464867 SHHQ15465 462 aa11.95□□□□□ -0.5
APP-213ENST00000464867 FAM110CQ1W6H9 321 aa11.95□□□□□ -0.5
APP-213ENST00000464867 KSR2Q6VAB6 950 aa11.95□□□□□ -0.5
APP-213ENST00000464867 PRRT2Q7Z6L0 340 aaPredicted RBP11.95□□□□□ -0.5
APP-213ENST00000464867 VPS37DQ86XT2 251 aa11.95□□□□□ -0.5
APP-213ENST00000464867 TBC1D22AQ8WUA7 517 aa11.95□□□□□ -0.5
APP-213ENST00000464867 ZDHHC15Q96MV8 337 aa11.95□□□□□ -0.5
APP-213ENST00000464867 UHRF1Q96T88 793 aaPredicted RBP11.95□□□□□ -0.5
APP-213ENST00000464867 PLA2G12BQ9BX93 195 aa11.95□□□□□ -0.5
APP-213ENST00000464867 PI4KAP2A4QPH2 592 aa11.94□□□□□ -0.5
APP-213ENST00000464867 CSF1RP07333 972 aa11.94□□□□□ -0.5
APP-213ENST00000464867 TRIM32Q13049 653 aa11.94□□□□□ -0.5
APP-213ENST00000464867 TRMT44Q8IYL2 757 aaKnown RBP11.94□□□□□ -0.5
APP-213ENST00000464867 PI4KAP1Q8N8J0 262 aa11.94□□□□□ -0.5
APP-213ENST00000464867 FAM151AQ8WW52 585 aa11.94□□□□□ -0.5
APP-213ENST00000464867 NLRP7Q8WX94 980 aa11.94□□□□□ -0.5
APP-213ENST00000464867 ASB2Q96Q27 587 aa11.94□□□□□ -0.5
APP-213ENST00000464867 MRIQ9BWK5 157 aa11.94□□□□□ -0.5
APP-213ENST00000464867 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
APP-213ENST00000464867 CHMP3Q9Y3E7 222 aa11.94□□□□□ -0.5
APP-213ENST00000464867 DNAH12Q6ZR08 3092 aa11.93□□□□□ -0.5
APP-213ENST00000464867 MAST3O60307 1309 aa11.93□□□□□ -0.5
APP-213ENST00000464867 NEURL1BA8MQ27 555 aa11.93□□□□□ -0.5
APP-213ENST00000464867 ACTN4O43707 911 aaKnown RBP11.93□□□□□ -0.5
APP-213ENST00000464867 GCLCP48506 637 aaPredicted RBP11.93□□□□□ -0.5
APP-213ENST00000464867 MRPS5P82675 430 aaKnown RBP11.93□□□□□ -0.5
APP-213ENST00000464867 CWF19L2Q2TBE0 894 aaKnown RBP11.93□□□□□ -0.5
APP-213ENST00000464867 TAF7LQ5H9L4 462 aa11.93□□□□□ -0.5
APP-213ENST00000464867 CCDC30Q5VVM6 783 aa11.93□□□□□ -0.5
APP-213ENST00000464867 PCGF6Q9BYE7 350 aa11.93□□□□□ -0.5
APP-213ENST00000464867 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.93□□□□□ -0.5
APP-213ENST00000464867 CNNM1Q9NRU3 951 aa11.93□□□□□ -0.5
APP-213ENST00000464867 THEGQ9P2T0 379 aa11.93□□□□□ -0.5
APP-213ENST00000464867 A0A1B0GUL6 1792 aa11.92□□□□□ -0.5
APP-213ENST00000464867 ELL2O00472 640 aaPredicted RBP11.92□□□□□ -0.5
APP-213ENST00000464867 GYG1P46976 350 aa11.92□□□□□ -0.5
APP-213ENST00000464867 LDHAL6AQ6ZMR3 332 aa11.92□□□□□ -0.5
APP-213ENST00000464867 GPIHBP1Q8IV16 184 aa11.92□□□□□ -0.5
APP-213ENST00000464867 USP38Q8NB14 1042 aa11.92□□□□□ -0.5
APP-213ENST00000464867 PPM1EQ8WY54 764 aa11.92□□□□□ -0.5
APP-213ENST00000464867 TRIB2Q92519 343 aa11.92□□□□□ -0.5
APP-213ENST00000464867 SNX27Q96L92 541 aa11.92□□□□□ -0.5
APP-213ENST00000464867 PHOX2BQ99453 314 aa11.92□□□□□ -0.5
APP-213ENST00000464867 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
APP-213ENST00000464867 AGTPBP1Q9UPW5 1226 aa11.92□□□□□ -0.5
APP-213ENST00000464867 CYP2B6P20813 491 aa11.91□□□□□ -0.5
APP-213ENST00000464867 TCP10Q12799 353 aa11.91□□□□□ -0.5
APP-213ENST00000464867 CHAF1AQ13111 956 aaPredicted RBP11.91□□□□□ -0.5
APP-213ENST00000464867 PABPC4Q13310 644 aaKnown RBP eCLIP11.91□□□□□ -0.5
APP-213ENST00000464867 UBE4AQ14139 1066 aa11.91□□□□□ -0.5
APP-213ENST00000464867 C9orf50Q5SZB4 431 aa11.91□□□□□ -0.5
APP-213ENST00000464867 MAP3K21Q5TCX8 1036 aa11.91□□□□□ -0.5
APP-213ENST00000464867 SCYL3Q8IZE3 742 aa11.91□□□□□ -0.5
APP-213ENST00000464867 GAS2L1Q99501 681 aaPredicted RBP11.91□□□□□ -0.5
APP-213ENST00000464867 NUDT12Q9BQG2 462 aa11.91□□□□□ -0.5
APP-213ENST00000464867 PRKD2Q9BZL6 878 aa11.91□□□□□ -0.5
APP-213ENST00000464867 MBIPQ9NS73 344 aa11.91□□□□□ -0.5
APP-213ENST00000464867 GJD2Q9UKL4 321 aa11.91□□□□□ -0.5
APP-213ENST00000464867 AFG3L2Q9Y4W6 797 aa11.91□□□□□ -0.5
APP-213ENST00000464867 MAST2Q6P0Q8 1798 aa11.9□□□□□ -0.5
APP-213ENST00000464867 TLL1O43897 1013 aa11.9□□□□□ -0.5
APP-213ENST00000464867 XRCC5P13010 732 aaKnown RBP11.9□□□□□ -0.5
APP-213ENST00000464867 ZKSCAN1P17029 563 aaPredicted RBP11.9□□□□□ -0.5
APP-213ENST00000464867 PTPRAP18433 802 aa11.9□□□□□ -0.5
APP-213ENST00000464867 MYO9BQ13459 2157 aa11.9□□□□□ -0.5
APP-213ENST00000464867 GCKRQ14397 625 aa11.9□□□□□ -0.5
APP-213ENST00000464867 PDE3AQ14432 1141 aa11.9□□□□□ -0.5
APP-213ENST00000464867 GRIN2CQ14957 1233 aa11.9□□□□□ -0.5
APP-213ENST00000464867 CCDC57Q2TAC2 916 aa11.9□□□□□ -0.5
APP-213ENST00000464867 KMT5BQ4FZB7 885 aa11.9□□□□□ -0.5
APP-213ENST00000464867 APOBEC3HQ6NTF7 200 aaKnown RBP11.9□□□□□ -0.5
APP-213ENST00000464867 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.5
APP-213ENST00000464867 FAM84BQ96KN1 310 aaPredicted RBP11.9□□□□□ -0.5
APP-213ENST00000464867 PRDM5Q9NQX1 630 aaPredicted RBP11.9□□□□□ -0.5
APP-213ENST00000464867 LRRFIP2Q9Y608 721 aaKnown RBP11.9□□□□□ -0.5
APP-213ENST00000464867 PTPRFP10586 1907 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms