RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 TRIM34Q9BYJ4 488 aa23.69■■□□□ 1.38
MCF2L2-206ENST00000464626 C19orf81C9J6K1 198 aa23.68■■□□□ 1.38
MCF2L2-206ENST00000464626 HOXA7P31268 230 aaPredicted RBP23.68■■□□□ 1.38
MCF2L2-206ENST00000464626 MTMR2Q13614 643 aa23.68■■□□□ 1.38
MCF2L2-206ENST00000464626 RPAP2Q8IXW5 612 aaPredicted RBP23.68■■□□□ 1.38
MCF2L2-206ENST00000464626 MAGEB6Q8N7X4 407 aa23.68■■□□□ 1.38
MCF2L2-206ENST00000464626 HABP4Q5JVS0 413 aaKnown RBP23.67■■□□□ 1.38
MCF2L2-206ENST00000464626 RHPN1Q8TCX5 695 aa23.67■■□□□ 1.38
MCF2L2-206ENST00000464626 ANTXR1Q9H6X2 564 aa23.67■■□□□ 1.38
MCF2L2-206ENST00000464626 TMOD4Q9NZQ9 345 aa23.67■■□□□ 1.38
MCF2L2-206ENST00000464626 MORF4L1Q9UBU8 362 aa23.67■■□□□ 1.38
MCF2L2-206ENST00000464626 SAP30BPQ9UHR5 308 aaKnown RBP23.67■■□□□ 1.38
MCF2L2-206ENST00000464626 ZBTB21Q9ULJ3 1066 aa23.67■■□□□ 1.38
MCF2L2-206ENST00000464626 INHAP05111 366 aa23.66■■□□□ 1.38
MCF2L2-206ENST00000464626 MIGA1Q8NAN2 632 aa23.66■■□□□ 1.38
MCF2L2-206ENST00000464626 UNC93B1Q9H1C4 597 aa23.66■■□□□ 1.38
MCF2L2-206ENST00000464626 EHD4Q9H223 541 aa23.66■■□□□ 1.38
MCF2L2-206ENST00000464626 DDX19BQ9UMR2 479 aa23.66■■□□□ 1.38
MCF2L2-206ENST00000464626 NDUFB9Q9Y6M9 179 aa23.66■■□□□ 1.38
MCF2L2-206ENST00000464626 USP17L10C9JJH3 530 aa23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 GDF11O95390 407 aa23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 ELNP15502 786 aa23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 USP5P45974 858 aa23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 TTF1Q15361 905 aaPredicted RBP23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 TATDN1Q6P1N9 297 aa23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 U2AF1L4Q8WU68 220 aaKnown RBP23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 IL1RAPL2Q9NP60 686 aa23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 ZBTB40Q9NUA8 1239 aa23.65■■□□□ 1.38
MCF2L2-206ENST00000464626 HMMRO75330 724 aa23.64■■□□□ 1.37
MCF2L2-206ENST00000464626 SGPL1O95470 568 aa23.64■■□□□ 1.37
MCF2L2-206ENST00000464626 IRX3P78415 501 aaPredicted RBP23.64■■□□□ 1.37
MCF2L2-206ENST00000464626 SHROOM1Q2M3G4 852 aaPredicted RBP23.64■■□□□ 1.37
MCF2L2-206ENST00000464626 KIF1BPQ96EK5 621 aa23.64■■□□□ 1.37
MCF2L2-206ENST00000464626 TTC6Q86TZ1 520 aa23.63■■□□□ 1.37
MCF2L2-206ENST00000464626 CLASRPQ8N2M8 674 aaKnown RBP23.63■■□□□ 1.37
MCF2L2-206ENST00000464626 RIOK1Q9BRS2 568 aaKnown RBP23.63■■□□□ 1.37
MCF2L2-206ENST00000464626 SERPINB13Q9UIV8 391 aa23.63■■□□□ 1.37
MCF2L2-206ENST00000464626 GJD2Q9UKL4 321 aa23.63■■□□□ 1.37
MCF2L2-206ENST00000464626 SIRT2Q8IXJ6 389 aa23.62■■□□□ 1.37
MCF2L2-206ENST00000464626 P2RX7Q99572 595 aaKnown RBP23.62■■□□□ 1.37
MCF2L2-206ENST00000464626 CHMP4BQ9H444 224 aaKnown RBP23.62■■□□□ 1.37
MCF2L2-206ENST00000464626 PAK6Q9NQU5 681 aaPredicted RBP23.62■■□□□ 1.37
MCF2L2-206ENST00000464626 DDX60LQ5H9U9 1706 aaKnown RBP23.62■■□□□ 1.37
MCF2L2-206ENST00000464626 GH2P01242 217 aa23.61■■□□□ 1.37
MCF2L2-206ENST00000464626 HERVK_113P62684 666 aa23.61■■□□□ 1.37
MCF2L2-206ENST00000464626 USP17L2Q6R6M4 530 aa23.61■■□□□ 1.37
MCF2L2-206ENST00000464626 HTATIP2Q9BUP3 242 aa23.61■■□□□ 1.37
MCF2L2-206ENST00000464626 COG6Q9Y2V7 657 aa23.61■■□□□ 1.37
MCF2L2-206ENST00000464626 H0YGN5 161 aa23.6■■□□□ 1.37
MCF2L2-206ENST00000464626 RAB11FIP3O75154 756 aa23.6■■□□□ 1.37
MCF2L2-206ENST00000464626 GTF3C2Q8WUA4 911 aaPredicted RBP23.6■■□□□ 1.37
MCF2L2-206ENST00000464626 C12orf42Q96LP6 360 aa23.6■■□□□ 1.37
MCF2L2-206ENST00000464626 EMILIN3Q9NT22 766 aa23.6■■□□□ 1.37
MCF2L2-206ENST00000464626 PLXNB2O15031 1838 aa23.6■■□□□ 1.37
MCF2L2-206ENST00000464626 MAGEB6P1A0A0J9YX57 407 aa23.59■■□□□ 1.37
MCF2L2-206ENST00000464626 FARP2O94887 1054 aaPredicted RBP23.59■■□□□ 1.37
MCF2L2-206ENST00000464626 HMGCRP04035 888 aa23.59■■□□□ 1.37
MCF2L2-206ENST00000464626 PDE6AP16499 860 aa23.59■■□□□ 1.37
MCF2L2-206ENST00000464626 GPRC5AQ8NFJ5 357 aa23.59■■□□□ 1.37
MCF2L2-206ENST00000464626 CRISPLD2Q9H0B8 497 aa23.59■■□□□ 1.37
MCF2L2-206ENST00000464626 TAOK2Q9UL54 1235 aa23.59■■□□□ 1.37
MCF2L2-206ENST00000464626 TRIOBPQ9H2D6 2365 aa23.59■■□□□ 1.37
MCF2L2-206ENST00000464626 NAV1Q8NEY1 1877 aa23.58■■□□□ 1.37
MCF2L2-206ENST00000464626 IFIT2P09913 472 aaKnown RBP23.58■■□□□ 1.37
MCF2L2-206ENST00000464626 SLC9C2Q5TAH2 1124 aa23.58■■□□□ 1.37
MCF2L2-206ENST00000464626 DPF3Q92784 378 aa23.58■■□□□ 1.37
MCF2L2-206ENST00000464626 DEFB118Q96PH6 123 aa23.58■■□□□ 1.37
MCF2L2-206ENST00000464626 TXNRD2Q9NNW7 524 aa23.58■■□□□ 1.37
MCF2L2-206ENST00000464626 RBPJLQ9UBG7 517 aa23.58■■□□□ 1.37
MCF2L2-206ENST00000464626 COLQQ9Y215 455 aaPredicted RBP23.58■■□□□ 1.37
MCF2L2-206ENST00000464626 CERKLQ49MI3 558 aaPredicted RBP23.57■■□□□ 1.36
MCF2L2-206ENST00000464626 CRNKL1Q9BZJ0 848 aaKnown RBP23.57■■□□□ 1.36
MCF2L2-206ENST00000464626 TCRBV5S4A2TA0A5A2 114 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 TFRCP02786 760 aaKnown RBP23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 SHMT1P34896 483 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 PLCD1P51178 756 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 USP14P54578 494 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 GABPAQ06546 454 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 ABCB5Q2M3G0 1257 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 SOCS4Q8WXH5 440 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 KIAA1683Q9H0B3 1180 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 RCAN3Q9UKA8 241 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 ZNF532Q9HCE3 1301 aa23.56■■□□□ 1.36
MCF2L2-206ENST00000464626 APBB1O00213 710 aa23.55■■□□□ 1.36
MCF2L2-206ENST00000464626 GOLIM4O00461 696 aa23.55■■□□□ 1.36
MCF2L2-206ENST00000464626 XRCC5P13010 732 aaKnown RBP23.55■■□□□ 1.36
MCF2L2-206ENST00000464626 MAPK4P31152 587 aa23.55■■□□□ 1.36
MCF2L2-206ENST00000464626 ERVK-9P63128 1117 aa23.55■■□□□ 1.36
MCF2L2-206ENST00000464626 ERVK-24P63145 666 aa23.55■■□□□ 1.36
MCF2L2-206ENST00000464626 CABP5Q9NP86 173 aa23.55■■□□□ 1.36
MCF2L2-206ENST00000464626 RPTORQ8N122 1335 aa23.55■■□□□ 1.36
MCF2L2-206ENST00000464626 USP17L15C9J2P7 530 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 USP17L13C9JLJ4 530 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 USP17L11C9JVI0 530 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 USP17L18D6R9N7 530 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 USP17L22D6RA61 530 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 USP17L17D6RBQ6 530 aa23.54■■□□□ 1.36
MCF2L2-206ENST00000464626 USP17L19D6RCP7 530 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms