RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ERCC5P28715 1186 aaPredicted RBP9.78□□□□□ -0.84
PTCD3-205ENST00000464541 YARSP54577 528 aaKnown RBP9.78□□□□□ -0.84
PTCD3-205ENST00000464541 NKG7Q16617 165 aa9.78□□□□□ -0.84
PTCD3-205ENST00000464541 SEZ6Q53EL9 994 aa9.78□□□□□ -0.84
PTCD3-205ENST00000464541 RASGRP4Q8TDF6 673 aa9.78□□□□□ -0.84
PTCD3-205ENST00000464541 ACSF2Q96CM8 615 aaPredicted RBP9.78□□□□□ -0.84
PTCD3-205ENST00000464541 DUSP23Q9BVJ7 150 aa9.78□□□□□ -0.84
PTCD3-205ENST00000464541 PIM2Q9P1W9 311 aa9.78□□□□□ -0.84
PTCD3-205ENST00000464541 LEMD3Q9Y2U8 911 aa9.78□□□□□ -0.84
PTCD3-205ENST00000464541 CORINQ9Y5Q5 1042 aa9.78□□□□□ -0.84
PTCD3-205ENST00000464541 PRR19A6NJB7 356 aa9.77□□□□□ -0.85
PTCD3-205ENST00000464541 FAM170BA6NMN3 283 aa9.77□□□□□ -0.85
PTCD3-205ENST00000464541 GRIK1P39086 918 aa9.77□□□□□ -0.85
PTCD3-205ENST00000464541 GJA8P48165 433 aa9.77□□□□□ -0.85
PTCD3-205ENST00000464541 PAK2Q13177 524 aa9.77□□□□□ -0.85
PTCD3-205ENST00000464541 INTS5Q6P9B9 1019 aaKnown RBP9.77□□□□□ -0.85
PTCD3-205ENST00000464541 REV1Q9UBZ9 1251 aa9.77□□□□□ -0.85
PTCD3-205ENST00000464541 PRAMEF13Q5VWM6 474 aa9.76□□□□□ -0.85
PTCD3-205ENST00000464541 ZNF765Q7L2R6 523 aa9.76□□□□□ -0.85
PTCD3-205ENST00000464541 SLFN12Q8IYM2 578 aa9.76□□□□□ -0.85
PTCD3-205ENST00000464541 TOP6BLQ8N6T0 577 aa9.76□□□□□ -0.85
PTCD3-205ENST00000464541 GPRASP2Q96D09 838 aa9.76□□□□□ -0.85
PTCD3-205ENST00000464541 PCDHB14Q9Y5E9 798 aa9.76□□□□□ -0.85
PTCD3-205ENST00000464541 GRIN3BO60391 1043 aa9.75□□□□□ -0.85
PTCD3-205ENST00000464541 IMPDH2P12268 514 aa9.75□□□□□ -0.85
PTCD3-205ENST00000464541 ZNF746Q6NUN9 644 aaPredicted RBP9.75□□□□□ -0.85
PTCD3-205ENST00000464541 FOSL1P15407 271 aa9.74□□□□□ -0.85
PTCD3-205ENST00000464541 MCM4P33991 863 aa9.74□□□□□ -0.85
PTCD3-205ENST00000464541 LRRFIP1Q32MZ4 808 aaKnown RBP9.74□□□□□ -0.85
PTCD3-205ENST00000464541 SHISA5Q8N114 240 aa9.74□□□□□ -0.85
PTCD3-205ENST00000464541 FAM13CQ8NE31 585 aa9.74□□□□□ -0.85
PTCD3-205ENST00000464541 MKNK2Q9HBH9 465 aa9.74□□□□□ -0.85
PTCD3-205ENST00000464541 GTF2IRD1Q9UHL9 959 aa9.74□□□□□ -0.85
PTCD3-205ENST00000464541 IGF2BP3O00425 579 aaKnown RBP eCLIP9.73□□□□□ -0.85
PTCD3-205ENST00000464541 COBLO75128 1261 aa9.73□□□□□ -0.85
PTCD3-205ENST00000464541 TGFB1P01137 390 aa9.73□□□□□ -0.85
PTCD3-205ENST00000464541 COX4I2Q96KJ9 171 aa9.73□□□□□ -0.85
PTCD3-205ENST00000464541 GMIPQ9P107 970 aa9.73□□□□□ -0.85
PTCD3-205ENST00000464541 CYP26A1O43174 497 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 LEFTY1O75610 366 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 SLITRK5O94991 958 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 ZMYM1Q5SVZ6 1142 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 GK5Q6ZS86 529 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 CYB5D2Q8WUJ1 264 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 MIPEPQ99797 713 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 ACBD3Q9H3P7 528 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 MAPK8IP1Q9UQF2 711 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 INPP5FQ9Y2H2 1132 aa9.72□□□□□ -0.85
PTCD3-205ENST00000464541 MEIS3P2A8K0S8 358 aa9.71□□□□□ -0.86
PTCD3-205ENST00000464541 EOMESO95936 686 aa9.71□□□□□ -0.86
PTCD3-205ENST00000464541 SOX9P48436 509 aa9.71□□□□□ -0.86
PTCD3-205ENST00000464541 CLCQ05315 142 aa9.71□□□□□ -0.86
PTCD3-205ENST00000464541 GNL2Q13823 731 aaKnown RBP9.71□□□□□ -0.86
PTCD3-205ENST00000464541 LETMD1Q6P1Q0 360 aa9.71□□□□□ -0.86
PTCD3-205ENST00000464541 FAM214BQ7L5A3 538 aa9.71□□□□□ -0.86
PTCD3-205ENST00000464541 ZNRF3Q9ULT6 936 aa9.71□□□□□ -0.86
PTCD3-205ENST00000464541 CYP7A1P22680 504 aa9.7□□□□□ -0.86
PTCD3-205ENST00000464541 SEC16BQ96JE7 1060 aa9.7□□□□□ -0.86
PTCD3-205ENST00000464541 PRDM5Q9NQX1 630 aaPredicted RBP9.7□□□□□ -0.86
PTCD3-205ENST00000464541 KLHL3Q9UH77 587 aa9.7□□□□□ -0.86
PTCD3-205ENST00000464541 SLC22A31A6NKX4 558 aa9.69□□□□□ -0.86
PTCD3-205ENST00000464541 ETV3P41162 512 aa9.69□□□□□ -0.86
PTCD3-205ENST00000464541 CD97P48960 835 aa9.69□□□□□ -0.86
PTCD3-205ENST00000464541 CDCP2Q5VXM1 449 aa9.69□□□□□ -0.86
PTCD3-205ENST00000464541 C22orf34Q6ZV56 151 aa9.69□□□□□ -0.86
PTCD3-205ENST00000464541 TMEM40Q8WWA1 233 aa9.69□□□□□ -0.86
PTCD3-205ENST00000464541 DPH2Q9BQC3 489 aaPredicted RBP9.69□□□□□ -0.86
PTCD3-205ENST00000464541 KIAA1324LA8MWY0 1029 aaPredicted RBP9.68□□□□□ -0.86
PTCD3-205ENST00000464541 UPK3BL1B0FP48 263 aa9.68□□□□□ -0.86
PTCD3-205ENST00000464541 UPK3BL2E5RIL1 263 aa9.68□□□□□ -0.86
PTCD3-205ENST00000464541 RBBP8NLQ8NC74 664 aaPredicted RBP9.68□□□□□ -0.86
PTCD3-205ENST00000464541 CCDC74BQ96LY2 380 aa9.68□□□□□ -0.86
PTCD3-205ENST00000464541 FERD3LQ96RJ6 166 aa9.68□□□□□ -0.86
PTCD3-205ENST00000464541 GINM1Q9NU53 330 aa9.68□□□□□ -0.86
PTCD3-205ENST00000464541 CEP131Q9UPN4 1083 aa9.68□□□□□ -0.86
PTCD3-205ENST00000464541 CHURC1-FNTBB4DL54 471 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 DNAJA2O60884 412 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 LRP8Q14114 963 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 MSMPQ1L6U9 139 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 DNAJB8Q8NHS0 232 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 HEXIM2Q96MH2 286 aaKnown RBP9.67□□□□□ -0.86
PTCD3-205ENST00000464541 CNNM2Q9H8M5 875 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 LRRC4CQ9HCJ2 640 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 STRIP2Q9ULQ0 834 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 TPX2Q9ULW0 747 aaKnown RBP9.67□□□□□ -0.86
PTCD3-205ENST00000464541 EFR3BQ9Y2G0 817 aa9.67□□□□□ -0.86
PTCD3-205ENST00000464541 CCNFP41002 786 aa9.66□□□□□ -0.86
PTCD3-205ENST00000464541 OXCT1P55809 520 aa9.66□□□□□ -0.86
PTCD3-205ENST00000464541 SFRP5Q5T4F7 317 aa9.66□□□□□ -0.86
PTCD3-205ENST00000464541 OVOS1Q6IE37 1185 aa9.66□□□□□ -0.86
PTCD3-205ENST00000464541 ARHGAP27Q6ZUM4 889 aa9.66□□□□□ -0.86
PTCD3-205ENST00000464541 DTX1Q86Y01 620 aa9.66□□□□□ -0.86
PTCD3-205ENST00000464541 PHACTR4Q8IZ21 702 aa9.66□□□□□ -0.86
PTCD3-205ENST00000464541 CAPN10Q9HC96 672 aa9.66□□□□□ -0.86
PTCD3-205ENST00000464541 GNAT3A8MTJ3 354 aa9.65□□□□□ -0.86
PTCD3-205ENST00000464541 RGS13O14921 159 aa9.65□□□□□ -0.86
PTCD3-205ENST00000464541 RAG1P15918 1043 aa9.65□□□□□ -0.86
PTCD3-205ENST00000464541 KIR3DL1P43629 444 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms