RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 PHAXQ9H814 394 aaKnown RBP8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 CHPF2Q9P2E5 772 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 MAP3K2Q9Y2U5 619 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 PIK3C2AO00443 1686 aa8.24□□□□□ -1.09
CLSTN1-204ENST00000464286 PALLDQ8WX93 1383 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 TNRQ92752 1358 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 PLEKHG2Q9H7P9 1386 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 ROBO2Q9HCK4 1378 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 UBR1Q8IWV7 1749 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 PHRF1Q9P1Y6 1649 aaKnown RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 A0A0D9SFI3 127 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 A0A1B0GUL7 405 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 A6NNZ2 444 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 BTBD11A6QL63 1104 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 PPP6R2O75170 966 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 NR3C2P08235 984 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 OAS2P29728 719 aaKnown RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 ACTN2P35609 894 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 ADD1P35611 737 aaKnown RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 TXLNAP40222 546 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 PLA2G4AP47712 749 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 PIP4K2AP48426 406 aaPredicted RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 PIP4K2BP78356 416 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 PPP2R3AQ06190 1150 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 RAD51AP2Q09MP3 1159 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 SCRN1Q12765 414 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 NR5A1Q13285 461 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 NR6A1Q15406 480 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 TUBB8Q3ZCM7 444 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 CFAP100Q494V2 611 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 MAP9Q49MG5 647 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 C1orf141Q5JVX7 400 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 GORABQ5T7V8 394 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 ARMCX5Q6P1M9 558 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 CC2D1AQ6P1N0 951 aaPredicted RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 FAM173BQ6P4H8 233 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 KRBA2Q6ZNG9 492 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 VSTM4Q8IW00 320 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 TRIML1Q8N9V2 468 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 KCNH5Q8NCM2 988 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 CTCFLQ8NI51 663 aaPredicted RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 PPM1EQ8WY54 764 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 CCDC51Q96ER9 411 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 C8orf76Q96K31 380 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 USP28Q96RU2 1077 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 HAUS7Q99871 368 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 TMX1Q9H3N1 280 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 MED4Q9NPJ6 270 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 GPR108Q9NPR9 543 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 MYO1AQ9UBC5 1043 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.23□□□□□ -1.092e-6■■■□□ 15.7
CLSTN1-204ENST00000464286 FEZ2Q9UHY8 353 aaPredicted RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 IQSEC3Q9UPP2 1182 aaPredicted RBP8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 EID1Q9Y6B2 187 aa8.23□□□□□ -1.09
CLSTN1-204ENST00000464286 NWD1Q149M9 1564 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 FAM237AA0A1B0GTK4 181 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 CPLX1O14810 134 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 KIF5CO60282 957 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 JAK2O60674 1132 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 AP1G2O75843 785 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 WFS1O76024 890 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 ZFYP08048 801 aaPredicted RBP8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 CCDC175P0C221 793 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 GNG11P61952 73 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 IRX3P78415 501 aaPredicted RBP8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 TRIM29Q14134 588 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 NAA30Q147X3 362 aaPredicted RBP8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 NBPF11Q86T75 865 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 TRMT44Q8IYL2 757 aaKnown RBP8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 MLKLQ8NB16 471 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 LINC00301Q8NCQ3 95 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 CCDC191Q8NCU4 936 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 WASF1Q92558 559 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 SMARCE1Q969G3 411 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 EAF2Q96CJ1 260 aaPredicted RBP8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 ZFP42Q96MM3 310 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 BAG1Q99933 345 aaPredicted RBP8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 CARD6Q9BX69 1037 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 BOLA2Q9H3K6 86 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 DDX21Q9NR30 783 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 FKBPLQ9UIM3 349 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 TUBE1Q9UJT0 475 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 PCDHA7Q9UN72 937 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 PPP2R2CQ9Y2T4 447 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 MRFAP1Q9Y605 127 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 KIF13AQ9H1H9 1805 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 CARMIL3Q8ND23 1372 aa8.22□□□□□ -1.09
CLSTN1-204ENST00000464286 SLIT3O75094 1523 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 MAGEB6P1A0A0J9YX57 407 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 POLR3GO15318 223 aaPredicted RBP8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 SASH1O94885 1247 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 ZNF202O95125 648 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 SYKP43405 635 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 USP5P45974 858 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 WHAMMP3Q1A5X7 153 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 FILIP1LQ4L180 1135 aa8.21□□□□□ -1.1
CLSTN1-204ENST00000464286 ANO1Q5XXA6 986 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms