RNA–Protein interactions for RNA: ENST00000464138.1

SSR3-203, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-203ENST00000464138 RNF17Q9BXT8 1623 aaKnown RBP8.69□□□□□ -1.02
SSR3-203ENST00000464138 SOX9P48436 509 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 RPL6Q02878 288 aaKnown RBP8.69□□□□□ -1.02
SSR3-203ENST00000464138 TRIM28Q13263 835 aaKnown RBP8.69□□□□□ -1.02
SSR3-203ENST00000464138 PDE3AQ14432 1141 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 LINC00114Q6XXX2 140 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 PODNQ7Z5L7 613 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 SLITRK4Q8IW52 837 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 PLVAPQ9BX97 442 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 PPP1R1BQ9UD71 204 aaPredicted RBP8.69□□□□□ -1.02
SSR3-203ENST00000464138 RTEL1-TNFRSF6BF6WH68 1400 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 NPHP4O75161 1426 aaPredicted RBP8.69□□□□□ -1.02
SSR3-203ENST00000464138 PZPP20742 1482 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 NLRP1Q9C000 1473 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 IQGAP1P46940 1657 aa8.69□□□□□ -1.02
SSR3-203ENST00000464138 LOC100289279A0A1B0GTE1 492 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 DLL1O00548 723 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 FGRP09769 529 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 GPBAR1Q8TDU6 330 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 TRIM11Q96F44 468 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 CCDC86Q9H6F5 360 aaKnown RBP8.68□□□□□ -1.02
SSR3-203ENST00000464138 CFDP1Q9UEE9 299 aaPredicted RBP8.68□□□□□ -1.02
SSR3-203ENST00000464138 EFR3BQ9Y2G0 817 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 SYNGAP1Q96PV0 1343 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 DHX29Q7Z478 1369 aaKnown RBP8.68□□□□□ -1.02
SSR3-203ENST00000464138 FYCO1Q9BQS8 1478 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 STRCP1A6NGW2 1772 aa8.68□□□□□ -1.02
SSR3-203ENST00000464138 SLFN14P0C7P3 912 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 ELNP15502 786 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 CRKP46108 304 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 SNRPNP63162 240 aaKnown RBP8.67□□□□□ -1.02
SSR3-203ENST00000464138 DUOXA2Q1HG44 320 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 FOXD4L6Q3SYB3 417 aaPredicted RBP8.67□□□□□ -1.02
SSR3-203ENST00000464138 SEZ6Q53EL9 994 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 PRRT3Q5FWE3 981 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 FOXD4L3Q6VB84 417 aaPredicted RBP8.67□□□□□ -1.02
SSR3-203ENST00000464138 REC114Q7Z4M0 266 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 REXO1Q8N1G1 1221 aaKnown RBP8.67□□□□□ -1.02
SSR3-203ENST00000464138 BEND7Q8N7W2 519 aaPredicted RBP8.67□□□□□ -1.02
SSR3-203ENST00000464138 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 MIA2Q96PC5 1412 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 KDM5DQ9BY66 1539 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 ZC3H12CQ9C0D7 883 aaKnown RBP8.67□□□□□ -1.02
SSR3-203ENST00000464138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.67□□□□□ -1.02
SSR3-203ENST00000464138 GINM1Q9NU53 330 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 UGGT1Q9NYU2 1555 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 RGS17Q9UGC6 210 aaPredicted RBP8.67□□□□□ -1.02
SSR3-203ENST00000464138 PCDHA4Q9UN74 947 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 SNCAIPQ9Y6H5 919 aa8.67□□□□□ -1.02
SSR3-203ENST00000464138 CCNB3Q8WWL7 1395 aa8.66□□□□□ -1.02
SSR3-203ENST00000464138 ADAM11O75078 769 aa8.66□□□□□ -1.02
SSR3-203ENST00000464138 ECEL1O95672 775 aa8.66□□□□□ -1.02
SSR3-203ENST00000464138 NASPP49321 788 aaPredicted RBP8.66□□□□□ -1.02
SSR3-203ENST00000464138 ZNF165P49910 485 aa8.66□□□□□ -1.02
SSR3-203ENST00000464138 KIF4BQ2VIQ3 1234 aa8.66□□□□□ -1.02
SSR3-203ENST00000464138 EXOSC6Q5RKV6 272 aaKnown RBP8.66□□□□□ -1.02
SSR3-203ENST00000464138 HDXQ7Z353 690 aa8.66□□□□□ -1.02
SSR3-203ENST00000464138 MCF2L2Q86YR7 1114 aa8.66□□□□□ -1.02
SSR3-203ENST00000464138 TACC3Q9Y6A5 838 aa8.66□□□□□ -1.02
SSR3-203ENST00000464138 TLR3O15455 904 aaKnown RBP8.65□□□□□ -1.02
SSR3-203ENST00000464138 DDX3YO15523 660 aaKnown RBP8.65□□□□□ -1.02
SSR3-203ENST00000464138 SSBP05455 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
SSR3-203ENST00000464138 IMPDH2P12268 514 aa8.65□□□□□ -1.02
SSR3-203ENST00000464138 PTPN11Q06124 597 aaPredicted RBP8.65□□□□□ -1.02
SSR3-203ENST00000464138 SOGA3Q5TF21 947 aa8.65□□□□□ -1.02
SSR3-203ENST00000464138 IGF2-ASQ6U949 168 aa8.65□□□□□ -1.02
SSR3-203ENST00000464138 ZSCAN1Q8NBB4 408 aa8.65□□□□□ -1.02
SSR3-203ENST00000464138 HIRIP3Q9BW71 556 aaPredicted RBP8.65□□□□□ -1.02
SSR3-203ENST00000464138 MRPL18Q9H0U6 180 aaKnown RBP8.65□□□□□ -1.02
SSR3-203ENST00000464138 RAD18Q9NS91 495 aa8.65□□□□□ -1.02
SSR3-203ENST00000464138 MBD5Q9P267 1494 aa8.64□□□□□ -1.03
SSR3-203ENST00000464138 WASHC2CQ9Y4E1 1318 aa8.64□□□□□ -1.03
SSR3-203ENST00000464138 MEGF11A6BM72 1044 aa8.64□□□□□ -1.03
SSR3-203ENST00000464138 STK10O94804 968 aaKnown RBP8.64□□□□□ -1.03
SSR3-203ENST00000464138 MCM4P33991 863 aa8.64□□□□□ -1.03
SSR3-203ENST00000464138 GTF2F1P35269 517 aaKnown RBP eCLIP8.64□□□□□ -1.03
SSR3-203ENST00000464138 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
SSR3-203ENST00000464138 FBXO27Q8NI29 283 aa8.64□□□□□ -1.03
SSR3-203ENST00000464138 CPLX3Q8WVH0 158 aa8.64□□□□□ -1.03
SSR3-203ENST00000464138 KCNK4Q9NYG8 393 aa8.64□□□□□ -1.03
SSR3-203ENST00000464138 ZC3H13Q5T200 1668 aaKnown RBP8.63□□□□□ -1.03
SSR3-203ENST00000464138 ZNF862O60290 1169 aa8.63□□□□□ -1.03
SSR3-203ENST00000464138 AOC2O75106 756 aa8.63□□□□□ -1.03
SSR3-203ENST00000464138 CTSBP07858 339 aa8.63□□□□□ -1.03
SSR3-203ENST00000464138 INSM1Q01101 510 aaPredicted RBP8.63□□□□□ -1.03
SSR3-203ENST00000464138 UBASH3BQ8TF42 649 aa8.63□□□□□ -1.03
SSR3-203ENST00000464138 ELMO3Q96BJ8 720 aa8.63□□□□□ -1.03
SSR3-203ENST00000464138 RUSC1Q9BVN2 902 aa8.63□□□□□ -1.03
SSR3-203ENST00000464138 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
SSR3-203ENST00000464138 CYP4F12Q9HCS2 524 aa8.63□□□□□ -1.03
SSR3-203ENST00000464138 XIRP1Q702N8 1843 aaKnown RBP8.62□□□□□ -1.03
SSR3-203ENST00000464138 KIF3BO15066 747 aa8.62□□□□□ -1.03
SSR3-203ENST00000464138 LIG1P18858 919 aa8.62□□□□□ -1.03
SSR3-203ENST00000464138 WIPI1Q5MNZ9 446 aaPredicted RBP8.62□□□□□ -1.03
SSR3-203ENST00000464138 NUTM2GQ5VZR2 741 aa8.62□□□□□ -1.03
SSR3-203ENST00000464138 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.62□□□□□ -1.03
SSR3-203ENST00000464138 WDR18Q9BV38 432 aa8.62□□□□□ -1.03
SSR3-203ENST00000464138 BRMS1Q9HCU9 246 aa8.62□□□□□ -1.03
SSR3-203ENST00000464138 FAM135BQ49AJ0 1406 aa8.62□□□□□ -1.03
SSR3-203ENST00000464138 GFRA2O00451 464 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 268.4 ms