RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ACTN3Q08043 901 aaPredicted RBP4.15□□□□□ -1.75
COL8A1-205ENST00000463753 SNW1Q13573 536 aaKnown RBP4.15□□□□□ -1.75
COL8A1-205ENST00000463753 ZRSR2Q15696 482 aaKnown RBP4.15□□□□□ -1.75
COL8A1-205ENST00000463753 CAMK4Q16566 473 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC144BQ3MJ40 725 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 TSHZ1Q6ZSZ6 1077 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 KRT28Q7Z3Y7 464 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 IQCA1Q86XH1 822 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC144CPQ8IYA2 1237 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 USP26Q9BXU7 913 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 MAF1Q9H063 256 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 ARFGAP3Q9NP61 516 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 PSD3Q9NYI0 1048 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.15□□□□□ -1.75
COL8A1-205ENST00000463753 STXBP5LQ9Y2K9 1186 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 ANKRD26Q9UPS8 1709 aa4.15□□□□□ -1.75
COL8A1-205ENST00000463753 GOLGA6CA6NDK9 693 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 GOLGA6BA6NDN3 693 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 MYO1FO00160 1098 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 N4BP1O75113 896 aaKnown RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 GOLGA6DP0CG33 693 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 SETSIPP0DME0 302 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 GRIK3Q13003 919 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CRYMQ14894 314 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 AKNAD1Q5T1N1 836 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CC2D1AQ6P1N0 951 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 ZKSCAN4Q969J2 545 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 EMID1Q96A84 441 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 SPDL1Q96EA4 605 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 TMX3Q96JJ7 454 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 POLR3EQ9NVU0 708 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 GOLGA6AQ9NYA3 693 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 DNAI1Q9UI46 699 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CNPY2Q9Y2B0 182 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CAPN7Q9Y6W3 813 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 MAP3K19Q56UN5 1328 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 URI1O94763 535 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC192P0DO97 292 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 VEGFAP15692 232 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 GGCXP38435 758 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 EVCP57679 992 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC181Q5TID7 509 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 PPP1R18Q6NYC8 613 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 FAM177A1Q8N128 213 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CNNM3Q8NE01 707 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 ZNF396Q96N95 335 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CARD6Q9BX69 1037 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 EVA1BQ9NVM1 165 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 LMCD1Q9NZU5 365 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 AKAP2Q9Y2D5 859 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 AKAP11Q9UKA4 1901 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 ZNF521Q96K83 1311 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 TMCO5BA8MYB1 307 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 C6orf229H3BNL8 230 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 ERC2O15083 957 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 TPP2P29144 1249 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 INPP5BP32019 993 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 GBP2P32456 591 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CCT5P48643 541 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 PDCD2Q16342 344 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 KIAA0825Q8IV33 1275 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CKAP2LQ8IYA6 745 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 NUP133Q8WUM0 1156 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 STAG1Q8WVM7 1258 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 CABS1Q96KC9 395 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 YIPF2Q9BWQ6 316 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 TEX13AQ9BXU3 409 aaPredicted RBP4.14□□□□□ -1.75
COL8A1-205ENST00000463753 PRO3102Q9H379 93 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 ACBD3Q9H3P7 528 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 TRAK1Q9UPV9 953 aa4.14□□□□□ -1.75
COL8A1-205ENST00000463753 RNF223E7ERA6 249 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 EXOC5O00471 708 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 PPP1R12BO60237 982 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 KIF4AO95239 1232 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 S1PR4O95977 384 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 SSBP05455 408 aaKnown RBP eCLIP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 PECAM1P16284 738 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 ZNF75DP51815 510 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 MVPQ14764 893 aaKnown RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 E2F5Q15329 346 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 INF2Q27J81 1249 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 HSP90B2PQ58FF3 399 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 THEMIS2Q5TEJ8 643 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 LDHDQ86WU2 507 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 LRRC8AQ8IWT6 810 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 TRMT2AQ8IZ69 625 aaKnown RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 FAM122AQ96E09 287 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 CLIC6Q96NY7 704 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 TACO1Q9BSH4 297 aaKnown RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 UBXN6Q9BZV1 441 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 FAM107BQ9H098 131 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 ZSWIM4Q9H7M6 989 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 RRP7AQ9Y3A4 280 aaKnown RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 FAM169AQ9Y6X4 670 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 V9GY48 417 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 ZNF609O15014 1411 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 RBM47A0AV96 593 aaKnown RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC69A6NI79 296 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 SGSM2O43147 1006 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms