RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 SSH3Q8TE77 659 aa28.39■■■□□ 2.14
SSNA1-203ENST00000463511 PAWRQ96IZ0 340 aaKnown RBP28.39■■■□□ 2.14
SSNA1-203ENST00000463511 C1orf115Q9H7X2 142 aa28.39■■■□□ 2.14
SSNA1-203ENST00000463511 GJD2Q9UKL4 321 aa28.39■■■□□ 2.14
SSNA1-203ENST00000463511 GDF11O95390 407 aa28.38■■■□□ 2.13
SSNA1-203ENST00000463511 BACE1P56817 501 aa28.38■■■□□ 2.13
SSNA1-203ENST00000463511 DIS3LQ8TF46 1054 aaKnown RBP28.38■■■□□ 2.13
SSNA1-203ENST00000463511 TRIM34Q9BYJ4 488 aa28.38■■■□□ 2.13
SSNA1-203ENST00000463511 TMOD4Q9NZQ9 345 aa28.38■■■□□ 2.13
SSNA1-203ENST00000463511 MORF4L1Q9UBU8 362 aa28.38■■■□□ 2.13
SSNA1-203ENST00000463511 PALD1Q9ULE6 856 aa28.38■■■□□ 2.13
SSNA1-203ENST00000463511 SURF6O75683 361 aaKnown RBP28.37■■■□□ 2.13
SSNA1-203ENST00000463511 ZAP70P43403 619 aa28.37■■■□□ 2.13
SSNA1-203ENST00000463511 TRIM32Q13049 653 aa28.37■■■□□ 2.13
SSNA1-203ENST00000463511 PIH1D3Q9NQM4 214 aaKnown RBP28.37■■■□□ 2.13
SSNA1-203ENST00000463511 SAP30BPQ9UHR5 308 aaKnown RBP28.37■■■□□ 2.13
SSNA1-203ENST00000463511 PEX10O60683 326 aa28.36■■■□□ 2.13
SSNA1-203ENST00000463511 ATP8B2P98198 1209 aa28.36■■■□□ 2.13
SSNA1-203ENST00000463511 METTL16Q86W50 562 aaKnown RBP28.36■■■□□ 2.13
SSNA1-203ENST00000463511 LAMA3Q16787 3333 aa28.36■■■□□ 2.13
SSNA1-203ENST00000463511 FOXP4Q8IVH2 680 aaPredicted RBP28.35■■■□□ 2.13
SSNA1-203ENST00000463511 ZNF512BQ96KM6 892 aaPredicted RBP28.35■■■□□ 2.13
SSNA1-203ENST00000463511 P2RX7Q99572 595 aaKnown RBP28.35■■■□□ 2.13
SSNA1-203ENST00000463511 TLR7Q9NYK1 1049 aaKnown RBP28.35■■■□□ 2.13
SSNA1-203ENST00000463511 DBNLQ9UJU6 430 aaKnown RBP28.35■■■□□ 2.13
SSNA1-203ENST00000463511 ZBTB21Q9ULJ3 1066 aa28.35■■■□□ 2.13
SSNA1-203ENST00000463511 RPTORQ8N122 1335 aa28.35■■■□□ 2.13
SSNA1-203ENST00000463511 HOXA7P31268 230 aaPredicted RBP28.34■■■□□ 2.13
SSNA1-203ENST00000463511 HERVK_113P62684 666 aa28.34■■■□□ 2.13
SSNA1-203ENST00000463511 DYNLL1P63167 89 aaKnown RBP28.34■■■□□ 2.13
SSNA1-203ENST00000463511 NECAB2Q7Z6G3 386 aa28.34■■■□□ 2.13
SSNA1-203ENST00000463511 TXNRD2Q9NNW7 524 aa28.34■■■□□ 2.13
SSNA1-203ENST00000463511 HMX1Q9NP08 348 aaPredicted RBP28.34■■■□□ 2.13
SSNA1-203ENST00000463511 FRMPD3Q5JV73 1810 aa28.34■■■□□ 2.13
SSNA1-203ENST00000463511 USP17L10C9JJH3 530 aa28.33■■■□□ 2.13
SSNA1-203ENST00000463511 TRIB2Q92519 343 aa28.33■■■□□ 2.13
SSNA1-203ENST00000463511 NAV1Q8NEY1 1877 aa28.33■■■□□ 2.13
SSNA1-203ENST00000463511 C19orf81C9J6K1 198 aa28.32■■■□□ 2.12
SSNA1-203ENST00000463511 HLA-DOAP06340 250 aa28.32■■■□□ 2.12
SSNA1-203ENST00000463511 RLBP1P12271 317 aa28.32■■■□□ 2.12
SSNA1-203ENST00000463511 CYP2B6P20813 491 aa28.32■■■□□ 2.12
SSNA1-203ENST00000463511 CYP7A1P22680 504 aa28.32■■■□□ 2.12
SSNA1-203ENST00000463511 FTSJ3Q8IY81 847 aaKnown RBP28.32■■■□□ 2.12
SSNA1-203ENST00000463511 ANKLE1Q8NAG6 615 aa28.32■■■□□ 2.12
SSNA1-203ENST00000463511 GINM1Q9NU53 330 aa28.32■■■□□ 2.12
SSNA1-203ENST00000463511 MIGA1Q8NAN2 632 aa28.31■■■□□ 2.12
SSNA1-203ENST00000463511 GPRC5AQ8NFJ5 357 aa28.31■■■□□ 2.12
SSNA1-203ENST00000463511 CCDC8Q9H0W5 538 aaPredicted RBP28.31■■■□□ 2.12
SSNA1-203ENST00000463511 IDH1O75874 414 aaKnown RBP28.3■■■□□ 2.12
SSNA1-203ENST00000463511 ITPRIPQ8IWB1 547 aa28.3■■■□□ 2.12
SSNA1-203ENST00000463511 STAP2Q9UGK3 403 aa28.3■■■□□ 2.12
SSNA1-203ENST00000463511 NOP58Q9Y2X3 529 aaKnown RBP28.3■■■□□ 2.12
SSNA1-203ENST00000463511 IGSF3O75054 1194 aa28.29■■■□□ 2.12
SSNA1-203ENST00000463511 C7orf61Q8IZ16 206 aa28.29■■■□□ 2.12
SSNA1-203ENST00000463511 EAF2Q96CJ1 260 aaPredicted RBP28.29■■■□□ 2.12
SSNA1-203ENST00000463511 NUDT12Q9BQG2 462 aa28.29■■■□□ 2.12
SSNA1-203ENST00000463511 NDUFB9Q9Y6M9 179 aa28.29■■■□□ 2.12
SSNA1-203ENST00000463511 A0A1W2PPC1 479 aa28.28■■■□□ 2.12
SSNA1-203ENST00000463511 GH2P01242 217 aa28.28■■■□□ 2.12
SSNA1-203ENST00000463511 PRKAR2AP13861 404 aaKnown RBP28.28■■■□□ 2.12
SSNA1-203ENST00000463511 PANK1Q8TE04 598 aa28.28■■■□□ 2.12
SSNA1-203ENST00000463511 SOCS4Q8WXH5 440 aa28.28■■■□□ 2.12
SSNA1-203ENST00000463511 PAGR1Q9BTK6 254 aa28.28■■■□□ 2.12
SSNA1-203ENST00000463511 EMILIN3Q9NT22 766 aa28.28■■■□□ 2.12
SSNA1-203ENST00000463511 RBPJLQ9UBG7 517 aa28.28■■■□□ 2.12
SSNA1-203ENST00000463511 MS4A1P11836 297 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 MNX1P50219 401 aaPredicted RBP28.27■■■□□ 2.12
SSNA1-203ENST00000463511 ERVK-9P63128 1117 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 ERVK-24P63145 666 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 PDE3AQ14432 1141 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 MAP3K21Q5TCX8 1036 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 MAGEB6Q8N7X4 407 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 NBPF3Q9H094 633 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 PORCNQ9H237 461 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 MYH8P13535 1937 aa28.27■■■□□ 2.12
SSNA1-203ENST00000463511 SOX1O00570 391 aaPredicted RBP28.26■■■□□ 2.11
SSNA1-203ENST00000463511 MAPK4P31152 587 aa28.26■■■□□ 2.11
SSNA1-203ENST00000463511 USP5P45974 858 aa28.26■■■□□ 2.11
SSNA1-203ENST00000463511 Q3C1V9 767 aa28.26■■■□□ 2.11
SSNA1-203ENST00000463511 USP17L2Q6R6M4 530 aa28.26■■■□□ 2.11
SSNA1-203ENST00000463511 CCAR1Q8IX12 1150 aaKnown RBP28.26■■■□□ 2.11
SSNA1-203ENST00000463511 XRCC5P13010 732 aaKnown RBP28.25■■■□□ 2.11
SSNA1-203ENST00000463511 ZYXQ15942 572 aaKnown RBP28.25■■■□□ 2.11
SSNA1-203ENST00000463511 POTEEQ6S8J3 1075 aa28.25■■■□□ 2.11
SSNA1-203ENST00000463511 OGDHLQ9ULD0 1010 aa28.25■■■□□ 2.11
SSNA1-203ENST00000463511 ZMYND8Q9ULU4 1186 aaPredicted RBP28.25■■■□□ 2.11
SSNA1-203ENST00000463511 ZKSCAN1P17029 563 aaPredicted RBP28.24■■■□□ 2.11
SSNA1-203ENST00000463511 GPR142Q7Z601 462 aa28.24■■■□□ 2.11
SSNA1-203ENST00000463511 GTF3C2Q8WUA4 911 aaPredicted RBP28.24■■■□□ 2.11
SSNA1-203ENST00000463511 FEZ1Q99689 392 aa28.24■■■□□ 2.11
SSNA1-203ENST00000463511 C11orf49Q9H6J7 331 aa28.24■■■□□ 2.11
SSNA1-203ENST00000463511 ANTXR1Q9H6X2 564 aa28.24■■■□□ 2.11
SSNA1-203ENST00000463511 C20orf194Q5TEA3 1177 aa28.23■■■□□ 2.11
SSNA1-203ENST00000463511 TATDN1Q6P1N9 297 aa28.23■■■□□ 2.11
SSNA1-203ENST00000463511 USP6NLQ92738 828 aa28.23■■■□□ 2.11
SSNA1-203ENST00000463511 SERPINB13Q9UIV8 391 aa28.23■■■□□ 2.11
SSNA1-203ENST00000463511 RRP1P56182 461 aaKnown RBP28.22■■■□□ 2.11
SSNA1-203ENST00000463511 CCL14Q16627 93 aa28.22■■■□□ 2.11
SSNA1-203ENST00000463511 CERS3Q8IU89 383 aa28.22■■■□□ 2.11
SSNA1-203ENST00000463511 LRCH3Q96II8 777 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms