RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 MYO5AQ9Y4I1 1855 aaKnown RBP11.6□□□□□ -0.55
PTPRD-207ENST00000463477 MROH7-TTC4A0A0A0MT08 1334 aa11.6□□□□□ -0.55
PTPRD-207ENST00000463477 ECM29Q5VYK3 1845 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 VPS37CA5D8V6 355 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 UBE2Q2LH0YL09 131 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 ZNF157P51786 506 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 DNM1Q05193 864 aaKnown RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 COL9A3Q14050 684 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 Q6ZUG5 572 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 PAXIP1Q6ZW49 1069 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 MOB2Q70IA6 237 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 TMEM39BQ9GZU3 492 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 SCAND2PQ9GZW5 306 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 FIBPO43427 364 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 USP2O75604 605 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 MCM5P33992 734 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 BTDP43251 543 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 EVCP57679 992 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 PPP4CP60510 307 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 HMGN5P82970 282 aaKnown RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 NOGQ13253 232 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 TTLL12Q14166 644 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 TTF1Q15361 905 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 STOX1Q6ZVD7 989 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 ZSCAN16Q9H4T2 348 aaPredicted RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 PIH1D3Q9NQM4 214 aaKnown RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 CTNNA3Q9UI47 895 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 ANGEL1Q9UNK9 670 aaKnown RBP11.59□□□□□ -0.55
PTPRD-207ENST00000463477 KIF3AQ9Y496 699 aa11.59□□□□□ -0.55
PTPRD-207ENST00000463477 FAM155AB1AL88 458 aaPredicted RBP11.58□□□□□ -0.56
PTPRD-207ENST00000463477 ENTPD3O75355 529 aa11.58□□□□□ -0.56
PTPRD-207ENST00000463477 NPM3O75607 178 aaKnown RBP11.58□□□□□ -0.56
PTPRD-207ENST00000463477 RHBDL3P58872 404 aa11.58□□□□□ -0.56
PTPRD-207ENST00000463477 MAP2K1Q02750 393 aaPredicted RBP11.58□□□□□ -0.56
PTPRD-207ENST00000463477 NFIAQ12857 509 aa11.58□□□□□ -0.56
PTPRD-207ENST00000463477 PRKG1Q13976 671 aa11.58□□□□□ -0.56
PTPRD-207ENST00000463477 NAA16Q6N069 864 aaPredicted RBP11.58□□□□□ -0.56
PTPRD-207ENST00000463477 RGS22Q8NE09 1264 aa11.58□□□□□ -0.56
PTPRD-207ENST00000463477 HOOK2Q96ED9 719 aa11.58□□□□□ -0.56
PTPRD-207ENST00000463477 ZNF274Q96GC6 653 aaPredicted RBP11.58□□□□□ -0.56
PTPRD-207ENST00000463477 WBP1LQ9NX94 342 aa11.58□□□□□ -0.56
PTPRD-207ENST00000463477 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
PTPRD-207ENST00000463477 WDR19Q8NEZ3 1342 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 E7EWF7 191 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 WDHD1O75717 1129 aaPredicted RBP11.57□□□□□ -0.56
PTPRD-207ENST00000463477 BAG3O95817 575 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 MAP3K12Q12852 859 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 GRM1Q13255 1194 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 FOXD4L6Q3SYB3 417 aaPredicted RBP11.57□□□□□ -0.56
PTPRD-207ENST00000463477 FOXD4L3Q6VB84 417 aaPredicted RBP11.57□□□□□ -0.56
PTPRD-207ENST00000463477 CDAN1Q8IWY9 1227 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 APPBP2Q92624 585 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 FUCA2Q9BTY2 467 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 NOL7Q9UMY1 257 aaKnown RBP11.57□□□□□ -0.56
PTPRD-207ENST00000463477 PAPPA2Q9BXP8 1791 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 MYH2Q9UKX2 1941 aa11.57□□□□□ -0.56
PTPRD-207ENST00000463477 AOC2O75106 756 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 IDH1O75874 414 aaKnown RBP11.56□□□□□ -0.56
PTPRD-207ENST00000463477 CHGBP05060 677 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 SLC10A3P09131 477 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 IREB2P48200 963 aaKnown RBP11.56□□□□□ -0.56
PTPRD-207ENST00000463477 ATL3Q6DD88 541 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 ZSCAN25Q6NSZ9 544 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 TTC6Q86TZ1 520 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 CCDC39Q9UFE4 941 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 FZD1Q9UP38 647 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 SSC5DA1L4H1 1573 aa11.56□□□□□ -0.56
PTPRD-207ENST00000463477 M0R2C6 588 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 PLCG2P16885 1265 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 SCRN1Q12765 414 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 TCP10Q12799 353 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 RESTQ13127 1097 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 CERS3Q8IU89 383 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 ZFPM1Q8IX07 1006 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 REM2Q8IYK8 340 aaPredicted RBP11.55□□□□□ -0.56
PTPRD-207ENST00000463477 ANKRD13AQ8IZ07 590 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 BRF1Q92994 677 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 OSBP2Q969R2 916 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 SLC10A4Q96EP9 437 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 NOL10Q9BSC4 688 aaKnown RBP11.55□□□□□ -0.56
PTPRD-207ENST00000463477 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPRD-207ENST00000463477 ZNF500O60304 480 aaPredicted RBP11.55□□□□□ -0.56
PTPRD-207ENST00000463477 HSPA1AP0DMV8 641 aaKnown RBP11.55□□□□□ -0.56
PTPRD-207ENST00000463477 HSPA1BP0DMV9 641 aaKnown RBP11.55□□□□□ -0.56
PTPRD-207ENST00000463477 CYP7A1P22680 504 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 MAP3K10Q02779 954 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 ADGRA1Q86SQ6 560 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 RASAL3Q86YV0 1011 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 MAGEB6Q8N7X4 407 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 NSUN7Q8NE18 718 aaKnown RBP11.55□□□□□ -0.56
PTPRD-207ENST00000463477 ZIC5Q96T25 663 aa11.55□□□□□ -0.56
PTPRD-207ENST00000463477 DDX4Q9NQI0 724 aaKnown RBP11.55□□□□□ -0.56
PTPRD-207ENST00000463477 FOXP2O15409 715 aa11.54□□□□□ -0.56
PTPRD-207ENST00000463477 MSNP26038 577 aaKnown RBP11.54□□□□□ -0.56
PTPRD-207ENST00000463477 MAP3K9P80192 1104 aa11.54□□□□□ -0.56
PTPRD-207ENST00000463477 KIF23Q02241 960 aaPredicted RBP11.54□□□□□ -0.56
PTPRD-207ENST00000463477 STK3Q13188 491 aa11.54□□□□□ -0.56
PTPRD-207ENST00000463477 IMMTQ16891 758 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms