RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
EPHA4-210ENST00000463446 C2orf69Q8N8R5 385 aa8.69□□□□□ -1.02
EPHA4-210ENST00000463446 NEDD1Q8NHV4 660 aa8.69□□□□□ -1.02
EPHA4-210ENST00000463446 ANKS1AQ92625 1134 aa8.69□□□□□ -1.02
EPHA4-210ENST00000463446 ZSCAN10Q96SZ4 725 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-210ENST00000463446 LZTS2Q9BRK4 669 aa8.69□□□□□ -1.02
EPHA4-210ENST00000463446 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
EPHA4-210ENST00000463446 PICK1Q9NRD5 415 aa8.69□□□□□ -1.02
EPHA4-210ENST00000463446 SAP30BPQ9UHR5 308 aaKnown RBP8.69□□□□□ -1.02
EPHA4-210ENST00000463446 ANGEL1Q9UNK9 670 aaKnown RBP8.69□□□□□ -1.02
EPHA4-210ENST00000463446 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.69□□□□□ -1.02
EPHA4-210ENST00000463446 ROBO3Q96MS0 1386 aa8.69□□□□□ -1.02
EPHA4-210ENST00000463446 MAST2Q6P0Q8 1798 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 SCN4AP35499 1836 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 PRC1O43663 620 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 KDM4AO75164 1064 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 CDKL5O76039 1030 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 TTLL1O95922 423 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 HAND2P61296 217 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 NFIAQ12857 509 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 TMEM67Q5HYA8 995 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
EPHA4-210ENST00000463446 CHADLQ6NUI6 762 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 RBM46Q8TBY0 533 aaKnown RBP8.68□□□□□ -1.02
EPHA4-210ENST00000463446 MKL1Q969V6 931 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 KAT14Q9H8E8 782 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 CWC22Q9HCG8 908 aaKnown RBP8.68□□□□□ -1.02
EPHA4-210ENST00000463446 EPB41L4AQ9HCS5 686 aaPredicted RBP8.68□□□□□ -1.02
EPHA4-210ENST00000463446 GGA3Q9NZ52 723 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 NYAP2Q9P242 653 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
EPHA4-210ENST00000463446 PNMA2Q9UL42 364 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 CSADQ9Y600 493 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 SLC12A7Q9Y666 1083 aa8.68□□□□□ -1.02
EPHA4-210ENST00000463446 DDTLA6NHG4 134 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 B4E1Z4 1266 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 C19orf81C9J6K1 198 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 MPHOSPH10O00566 681 aaKnown RBP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 TOMM70O94826 608 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 CHGBP05060 677 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 TOP1P11387 765 aaKnown RBP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 SMARCA1P28370 1054 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 CAP2P40123 477 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 HIRAP54198 1017 aaPredicted RBP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 USP14P54578 494 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 EVCP57679 992 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 MAP3K9P80192 1104 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 SGMS1Q86VZ5 419 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 ANKRD13AQ8IZ07 590 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 RASEFQ8IZ41 740 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 SMC1BQ8NDV3 1235 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 RGS22Q8NE09 1264 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 IGDCC4Q8TDY8 1250 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 LLPHQ9BRT6 129 aaKnown RBP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 TMEM39BQ9GZU3 492 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 IL25Q9H293 177 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
EPHA4-210ENST00000463446 DDX4Q9NQI0 724 aaKnown RBP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 RBM28Q9NW13 759 aaKnown RBP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 RBM19Q9Y4C8 960 aaKnown RBP8.67□□□□□ -1.02
EPHA4-210ENST00000463446 SCN9AQ15858 1988 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 USP17L5A8MUK1 530 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 CPLX1O14810 134 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 FOXP2O15409 715 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 FDX1P10109 184 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 XBP1P17861 261 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 RASA1P20936 1047 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 CACNB3P54284 484 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 AKAP17AQ02040 695 aaKnown RBP8.66□□□□□ -1.02
EPHA4-210ENST00000463446 FSTL1Q12841 308 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-210ENST00000463446 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 Q6ZUG5 572 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 MB21D2Q8IYB1 491 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-210ENST00000463446 FAM177A1Q8N128 213 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-210ENST00000463446 CTCFLQ8NI51 663 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-210ENST00000463446 TRPM4Q8TD43 1214 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 WASF1Q92558 559 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 SLC10A4Q96EP9 437 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 INTS4Q96HW7 963 aaKnown RBP8.66□□□□□ -1.02
EPHA4-210ENST00000463446 SLKQ9H2G2 1235 aaPredicted RBP8.66□□□□□ -1.02
EPHA4-210ENST00000463446 MTMR4Q9NYA4 1195 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 ZNF112Q9UJU3 913 aa8.66□□□□□ -1.02
EPHA4-210ENST00000463446 COL4A5P29400 1685 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 CNTNAP1P78357 1384 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 POTECB2RU33 542 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 K7ELQ4 463 aaPredicted RBP8.65□□□□□ -1.02
EPHA4-210ENST00000463446 ZBTB43O43298 467 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 DDAH1O94760 285 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 PDCP20941 246 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 INHBEP58166 350 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 HMGN5P82970 282 aaKnown RBP8.65□□□□□ -1.02
EPHA4-210ENST00000463446 PABPC4Q13310 644 aaKnown RBP eCLIP8.65□□□□□ -1.02
EPHA4-210ENST00000463446 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 GPATCH4Q5T3I0 446 aaKnown RBP8.65□□□□□ -1.02
EPHA4-210ENST00000463446 MIGA2Q7L4E1 593 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 TEX2Q8IWB9 1127 aa8.65□□□□□ -1.02
EPHA4-210ENST00000463446 REM2Q8IYK8 340 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms