RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 NEUROD2Q15784 382 aa16.99■□□□□ 0.31
C9orf3-211ENST00000463372 ZFPM1Q8IX07 1006 aa16.99■□□□□ 0.31
C9orf3-211ENST00000463372 ZNF280CQ8ND82 737 aa16.99■□□□□ 0.31
C9orf3-211ENST00000463372 HLA-CQ95604 372 aa16.99■□□□□ 0.31
C9orf3-211ENST00000463372 PHOX2BQ99453 314 aa16.99■□□□□ 0.31
C9orf3-211ENST00000463372 PORCNQ9H237 461 aa16.99■□□□□ 0.31
C9orf3-211ENST00000463372 TXNRD2Q9NNW7 524 aa16.99■□□□□ 0.31
C9orf3-211ENST00000463372 CD320Q9NPF0 282 aa16.99■□□□□ 0.31
C9orf3-211ENST00000463372 PTPRZ1P23471 2315 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-211ENST00000463372 ERVK-9P63128 1117 aa16.98■□□□□ 0.31
C9orf3-211ENST00000463372 ERVK-24P63145 666 aa16.98■□□□□ 0.31
C9orf3-211ENST00000463372 PPIGQ13427 754 aaKnown RBP eCLIP16.98■□□□□ 0.312e-8■□□□□ 10.5
C9orf3-211ENST00000463372 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
C9orf3-211ENST00000463372 SLC44A5Q8NCS7 719 aa16.98■□□□□ 0.31
C9orf3-211ENST00000463372 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
C9orf3-211ENST00000463372 USP40Q9NVE5 1235 aa16.98■□□□□ 0.31
C9orf3-211ENST00000463372 CYP2C19P33261 490 aa16.97■□□□□ 0.31
C9orf3-211ENST00000463372 HERVK_113P62684 666 aa16.97■□□□□ 0.31
C9orf3-211ENST00000463372 TMEM240Q5SV17 173 aa16.97■□□□□ 0.31
C9orf3-211ENST00000463372 RASIP1Q5U651 963 aa16.97■□□□□ 0.31
C9orf3-211ENST00000463372 ANO1Q5XXA6 986 aa16.97■□□□□ 0.31
C9orf3-211ENST00000463372 FBXO33Q7Z6M2 555 aa16.97■□□□□ 0.31
C9orf3-211ENST00000463372 ZNF594Q96JF6 807 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-211ENST00000463372 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.97■□□□□ 0.314e-8■■■■■ 37.5
C9orf3-211ENST00000463372 A0A0G2JMZ2 1700 aa16.96■□□□□ 0.31
C9orf3-211ENST00000463372 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-211ENST00000463372 CASP7P55210 303 aa16.96■□□□□ 0.31
C9orf3-211ENST00000463372 MAP3K10Q02779 954 aa16.96■□□□□ 0.31
C9orf3-211ENST00000463372 CCDC57Q2TAC2 916 aa16.96■□□□□ 0.31
C9orf3-211ENST00000463372 Q3C1V9 767 aa16.96■□□□□ 0.31
C9orf3-211ENST00000463372 PPP2R2DQ66LE6 453 aa16.96■□□□□ 0.31
C9orf3-211ENST00000463372 TRPV1Q8NER1 839 aa16.96■□□□□ 0.31
C9orf3-211ENST00000463372 MYH16Q9H6N6 1097 aa16.96■□□□□ 0.31
C9orf3-211ENST00000463372 TIMP1P01033 207 aa16.95■□□□□ 0.3
C9orf3-211ENST00000463372 CYBAP13498 195 aa16.95■□□□□ 0.3
C9orf3-211ENST00000463372 LRRC41Q15345 812 aa16.95■□□□□ 0.3
C9orf3-211ENST00000463372 GJD3Q8N144 294 aa16.95■□□□□ 0.3
C9orf3-211ENST00000463372 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
C9orf3-211ENST00000463372 CHMP4AQ9BY43 222 aa16.95■□□□□ 0.3
C9orf3-211ENST00000463372 RBPJLQ9UBG7 517 aa16.95■□□□□ 0.3
C9orf3-211ENST00000463372 YBX2Q9Y2T7 364 aaKnown RBP16.95■□□□□ 0.3
C9orf3-211ENST00000463372 SMCHD1A6NHR9 2005 aa16.95■□□□□ 0.3
C9orf3-211ENST00000463372 ZFHX2Q9C0A1 2572 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-211ENST00000463372 DCDC2CA8MYV0 355 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 ENTPD3O75355 529 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 SSTR3P32745 418 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-211ENST00000463372 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-211ENST00000463372 RGS3P49796 1198 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 SH3D19Q5HYK7 790 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 WDR78Q5VTH9 848 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 CCDC30Q5VVM6 783 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 MFSD5Q6N075 450 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 PSRC1Q6PGN9 363 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-211ENST00000463372 GTF3C2Q8WUA4 911 aaPredicted RBP16.94■□□□□ 0.3
C9orf3-211ENST00000463372 MTIF3Q9H2K0 278 aaKnown RBP16.94■□□□□ 0.3
C9orf3-211ENST00000463372 TMOD4Q9NZQ9 345 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 MTCH2Q9Y6C9 303 aa16.94■□□□□ 0.3
C9orf3-211ENST00000463372 HOXA7P31268 230 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-211ENST00000463372 C16orf59Q7L2K0 433 aa16.93■□□□□ 0.3
C9orf3-211ENST00000463372 MBIPQ9NS73 344 aa16.93■□□□□ 0.3
C9orf3-211ENST00000463372 PHF24Q9UPV7 400 aa16.93■□□□□ 0.3
C9orf3-211ENST00000463372 NDUFB9Q9Y6M9 179 aa16.93■□□□□ 0.3
C9orf3-211ENST00000463372 ZNF521Q96K83 1311 aa16.93■□□□□ 0.3
C9orf3-211ENST00000463372 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 SLC15A5A6NIM6 579 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 APBB1O00213 710 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 SEPT4O43236 478 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 SLURP2P0DP57 97 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 POU3F3P20264 500 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-211ENST00000463372 FAAP100Q0VG06 881 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 DIXDC1Q155Q3 683 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 ZNF365Q70YC5 407 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 ERMP1Q7Z2K6 904 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 AS3MTQ9HBK9 375 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 IVNS1ABPQ9Y6Y0 642 aa16.92■□□□□ 0.3
C9orf3-211ENST00000463372 GFRA3O60609 400 aa16.91■□□□□ 0.3
C9orf3-211ENST00000463372 SLC5A1P13866 664 aa16.91■□□□□ 0.3
C9orf3-211ENST00000463372 CCNA1P78396 465 aa16.91■□□□□ 0.3
C9orf3-211ENST00000463372 FOXO4P98177 505 aa16.91■□□□□ 0.3
C9orf3-211ENST00000463372 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
C9orf3-211ENST00000463372 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
C9orf3-211ENST00000463372 TMEM199Q8N511 208 aa16.91■□□□□ 0.3
C9orf3-211ENST00000463372 TOX2Q96NM4 488 aa16.91■□□□□ 0.3
C9orf3-211ENST00000463372 OSBPL5Q9H0X9 879 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-211ENST00000463372 DDTLA6NHG4 134 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-211ENST00000463372 USP17L5A8MUK1 530 aa16.9■□□□□ 0.3
C9orf3-211ENST00000463372 HOXC6P09630 235 aa16.9■□□□□ 0.3
C9orf3-211ENST00000463372 ACRP10323 421 aa16.9■□□□□ 0.3
C9orf3-211ENST00000463372 PTPREP23469 700 aa16.9■□□□□ 0.3
C9orf3-211ENST00000463372 LMBR1LQ6UX01 489 aa16.9■□□□□ 0.3
C9orf3-211ENST00000463372 MFSD14AQ96MC6 490 aa16.9■□□□□ 0.3
C9orf3-211ENST00000463372 IDI2Q9BXS1 227 aa16.9■□□□□ 0.3
C9orf3-211ENST00000463372 CSF2RAP15509 400 aa16.89■□□□□ 0.29
C9orf3-211ENST00000463372 PTPN5P54829 565 aa16.89■□□□□ 0.29
C9orf3-211ENST00000463372 MTMR2Q13614 643 aa16.89■□□□□ 0.29
C9orf3-211ENST00000463372 ANKRD33Q7Z3H0 272 aa16.89■□□□□ 0.29
C9orf3-211ENST00000463372 NPLOC4Q8TAT6 608 aa16.89■□□□□ 0.29
C9orf3-211ENST00000463372 WDR66Q8TBY9 1149 aa16.89■□□□□ 0.29
C9orf3-211ENST00000463372 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
C9orf3-211ENST00000463372 DCXO43602 365 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms