RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 CCDC88AQ3V6T2 1871 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 ECM29Q5VYK3 1845 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 MYH15Q9Y2K3 1946 aa14.86□□□□□ -0.03
VAPB-203ENST00000463370 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.85□□□□□ -0.03
VAPB-203ENST00000463370 ALDH1B1P30837 517 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 TFAP4Q01664 338 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 TRIM29Q14134 588 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 PKN1Q16512 942 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 RBM43Q6ZSC3 357 aaKnown RBP14.85□□□□□ -0.03
VAPB-203ENST00000463370 FSIP1Q8NA03 581 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 ANP32BQ92688 251 aaKnown RBP14.85□□□□□ -0.03
VAPB-203ENST00000463370 CAMKK2Q96RR4 588 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 PDGFDQ9GZP0 370 aaPredicted RBP14.85□□□□□ -0.03
VAPB-203ENST00000463370 COA1Q9GZY4 146 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 MYH2Q9UKX2 1941 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 USP17L3A6NCW0 530 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 USP17L4A6NCW7 530 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 SPTLC2O15270 562 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 DEXIO95424 95 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 MMP1P03956 469 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 CHRNA5P30532 468 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 SF3A1Q15459 793 aaKnown RBP14.85□□□□□ -0.03
VAPB-203ENST00000463370 USP17L1Q7RTZ2 530 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 C2CD5Q86YS7 1000 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 TEX11Q8IYF3 940 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 RGS22Q8NE09 1264 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 NOL10Q9BSC4 688 aaKnown RBP14.85□□□□□ -0.03
VAPB-203ENST00000463370 ZC3H12CQ9C0D7 883 aaKnown RBP14.85□□□□□ -0.03
VAPB-203ENST00000463370 KCNQ5Q9NR82 932 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 DAGLAQ9Y4D2 1042 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 MRVI1Q9Y6F6 885 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 GAKO14976 1311 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 FLT1P17948 1338 aa14.85□□□□□ -0.03
VAPB-203ENST00000463370 ROBO3Q96MS0 1386 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 A0A1B0GVL5 298 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 IGSF3O75054 1194 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 WDHD1O75717 1129 aaPredicted RBP14.84□□□□□ -0.03
VAPB-203ENST00000463370 YEATS4O95619 227 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 MARCKSP29966 332 aaPredicted RBP14.84□□□□□ -0.03
VAPB-203ENST00000463370 TYRO3Q06418 890 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 NR5A1Q13285 461 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 GNL2Q13823 731 aaKnown RBP14.84□□□□□ -0.03
VAPB-203ENST00000463370 SLC15A2Q16348 729 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 DIS3L2Q8IYB7 885 aaKnown RBP14.84□□□□□ -0.03
VAPB-203ENST00000463370 OXER1Q8TDS5 423 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 TBC1D22AQ8WUA7 517 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
VAPB-203ENST00000463370 LAMB1P07942 1786 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 ADALQ6DHV7 355 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 FAM163AQ96GL9 167 aaPredicted RBP14.84□□□□□ -0.03
VAPB-203ENST00000463370 MAP3K14Q99558 947 aa14.84□□□□□ -0.03
VAPB-203ENST00000463370 V9GY48 417 aaPredicted RBP14.84□□□□□ -0.03
VAPB-203ENST00000463370 CCDC192P0DO97 292 aa14.83□□□□□ -0.03
VAPB-203ENST00000463370 NDUFA8P51970 172 aa14.83□□□□□ -0.03
VAPB-203ENST00000463370 PTPAQ15257 358 aa14.83□□□□□ -0.03
VAPB-203ENST00000463370 AXDND1Q5T1B0 1012 aaPredicted RBP14.83□□□□□ -0.03
VAPB-203ENST00000463370 SRBD1Q8N5C6 995 aaKnown RBP14.83□□□□□ -0.03
VAPB-203ENST00000463370 KCNG4Q8TDN1 519 aa14.83□□□□□ -0.03
VAPB-203ENST00000463370 WASF1Q92558 559 aa14.83□□□□□ -0.03
VAPB-203ENST00000463370 RNF26Q9BY78 433 aaPredicted RBP14.83□□□□□ -0.03
VAPB-203ENST00000463370 MKNK2Q9HBH9 465 aa14.83□□□□□ -0.03
VAPB-203ENST00000463370 VPS54Q9P1Q0 977 aa14.83□□□□□ -0.03
VAPB-203ENST00000463370 DDAH1O94760 285 aa14.83□□□□□ -0.04
VAPB-203ENST00000463370 VEGFAP15692 232 aaPredicted RBP14.83□□□□□ -0.04
VAPB-203ENST00000463370 SLC39A14Q15043 492 aa14.83□□□□□ -0.04
VAPB-203ENST00000463370 TMTC3Q6ZXV5 915 aa14.83□□□□□ -0.04
VAPB-203ENST00000463370 NOSTRINQ8IVI9 506 aa14.83□□□□□ -0.04
VAPB-203ENST00000463370 ERCC4Q92889 916 aaPredicted RBP14.83□□□□□ -0.04
VAPB-203ENST00000463370 DBNDD1Q9H9R9 158 aa14.83□□□□□ -0.04
VAPB-203ENST00000463370 A0A087WWV3 80 aa14.82□□□□□ -0.04
VAPB-203ENST00000463370 RASA1P20936 1047 aa14.82□□□□□ -0.04
VAPB-203ENST00000463370 TOB1P50616 345 aaPredicted RBP14.82□□□□□ -0.04
VAPB-203ENST00000463370 FAM160A1Q05DH4 1040 aa14.82□□□□□ -0.04
VAPB-203ENST00000463370 FMR1NBQ8N0W7 255 aaPredicted RBP14.82□□□□□ -0.04
VAPB-203ENST00000463370 MRPS27Q92552 414 aaKnown RBP14.82□□□□□ -0.04
VAPB-203ENST00000463370 USP25Q9UHP3 1055 aa14.82□□□□□ -0.04
VAPB-203ENST00000463370 SCNN1DP51172 638 aa14.82□□□□□ -0.04
VAPB-203ENST00000463370 CCDC73Q6ZRK6 1079 aa14.82□□□□□ -0.04
VAPB-203ENST00000463370 PIBF1Q8WXW3 757 aa14.82□□□□□ -0.04
VAPB-203ENST00000463370 TRIM44Q96DX7 344 aaPredicted RBP14.82□□□□□ -0.04
VAPB-203ENST00000463370 CNTNAP5Q8WYK1 1306 aa14.82□□□□□ -0.04
VAPB-203ENST00000463370 A0A1W2PQ27 194 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 A0A1W2PQ64 194 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 A0A1W2PQD8 194 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 AP5Z1O43299 807 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 PPP2R5BQ15173 497 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 RASGRP2Q7LDG7 609 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 RBM28Q9NW13 759 aaKnown RBP14.81□□□□□ -0.04
VAPB-203ENST00000463370 TTF2Q9UNY4 1162 aaKnown RBP14.81□□□□□ -0.04
VAPB-203ENST00000463370 UTRNP46939 3433 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 FAM205CA6NFA0 338 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 H0YIN7 160 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 PRPF3O43395 683 aaKnown RBP14.81□□□□□ -0.04
VAPB-203ENST00000463370 TSPY3P0CV98 308 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 TSPY8P0CW00 308 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 CALM1P0DP23 149 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 CALM2P0DP24 149 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 CALM3P0DP25 149 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 CDK8P49336 464 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 PICALMQ13492 652 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms