RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 NBPF3Q9H094 633 aa25.47■■□□□ 1.67
CPSF7-209ENST00000463244 GPR108Q9NPR9 543 aa25.47■■□□□ 1.67
CPSF7-209ENST00000463244 CUL9Q8IWT3 2517 aa25.46■■□□□ 1.67
CPSF7-209ENST00000463244 TTC39AQ5SRH9 613 aa25.46■■□□□ 1.67
CPSF7-209ENST00000463244 MAP3K21Q5TCX8 1036 aa25.46■■□□□ 1.67
CPSF7-209ENST00000463244 FOXP4Q8IVH2 680 aaPredicted RBP25.46■■□□□ 1.67
CPSF7-209ENST00000463244 C7orf61Q8IZ16 206 aa25.46■■□□□ 1.67
CPSF7-209ENST00000463244 LRCH3Q96II8 777 aa25.46■■□□□ 1.67
CPSF7-209ENST00000463244 TXNRD2Q9NNW7 524 aa25.46■■□□□ 1.67
CPSF7-209ENST00000463244 OGDHLQ9ULD0 1010 aa25.46■■□□□ 1.67
CPSF7-209ENST00000463244 LAMA2P24043 3122 aaKnown RBP25.46■■□□□ 1.67
CPSF7-209ENST00000463244 C19orf81C9J6K1 198 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 PEX10O60683 326 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 CYP2B6P20813 491 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 BMP8BP34820 402 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 HERVK_113P62684 666 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 SHROOM1Q2M3G4 852 aaPredicted RBP25.45■■□□□ 1.66
CPSF7-209ENST00000463244 TNNI3KQ59H18 835 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 GPRC5AQ8NFJ5 357 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 GINM1Q9NU53 330 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 FPGT-TNNI3KV9GXZ4 949 aa25.45■■□□□ 1.66
CPSF7-209ENST00000463244 USP17L10C9JJH3 530 aa25.44■■□□□ 1.66
CPSF7-209ENST00000463244 CYP2E1P05181 493 aaPredicted RBP25.44■■□□□ 1.66
CPSF7-209ENST00000463244 XRCC5P13010 732 aaKnown RBP25.44■■□□□ 1.66
CPSF7-209ENST00000463244 CCDC158Q5M9N0 1113 aa25.44■■□□□ 1.66
CPSF7-209ENST00000463244 CRACR2BQ8N4Y2 399 aaPredicted RBP25.44■■□□□ 1.66
CPSF7-209ENST00000463244 SOCS4Q8WXH5 440 aa25.44■■□□□ 1.66
CPSF7-209ENST00000463244 FRAT1Q92837 279 aaPredicted RBP25.44■■□□□ 1.66
CPSF7-209ENST00000463244 CLUAP1Q96AJ1 413 aa25.44■■□□□ 1.66
CPSF7-209ENST00000463244 NUDT12Q9BQG2 462 aa25.44■■□□□ 1.66
CPSF7-209ENST00000463244 DBNDD2Q9BQY9 259 aa25.44■■□□□ 1.66
CPSF7-209ENST00000463244 PALD1Q9ULE6 856 aa25.44■■□□□ 1.66
CPSF7-209ENST00000463244 BCAR3O75815 825 aa25.43■■□□□ 1.66
CPSF7-209ENST00000463244 GDF11O95390 407 aa25.43■■□□□ 1.66
CPSF7-209ENST00000463244 PRKAR2AP13861 404 aaKnown RBP25.43■■□□□ 1.66
CPSF7-209ENST00000463244 POLA2Q14181 598 aa25.43■■□□□ 1.66
CPSF7-209ENST00000463244 TRIM34Q9BYJ4 488 aa25.43■■□□□ 1.66
CPSF7-209ENST00000463244 C11orf49Q9H6J7 331 aa25.43■■□□□ 1.66
CPSF7-209ENST00000463244 ZBTB21Q9ULJ3 1066 aa25.43■■□□□ 1.66
CPSF7-209ENST00000463244 ZMYND8Q9ULU4 1186 aaPredicted RBP25.43■■□□□ 1.66
CPSF7-209ENST00000463244 IGSF3O75054 1194 aa25.42■■□□□ 1.66
CPSF7-209ENST00000463244 ZNF512BQ96KM6 892 aaPredicted RBP25.42■■□□□ 1.66
CPSF7-209ENST00000463244 RBPJLQ9UBG7 517 aa25.42■■□□□ 1.66
CPSF7-209ENST00000463244 MAPK4P31152 587 aa25.41■■□□□ 1.66
CPSF7-209ENST00000463244 ERVK-9P63128 1117 aa25.41■■□□□ 1.66
CPSF7-209ENST00000463244 ERVK-24P63145 666 aa25.41■■□□□ 1.66
CPSF7-209ENST00000463244 MYH1P12882 1939 aa25.41■■□□□ 1.66
CPSF7-209ENST00000463244 PDE3AQ14432 1141 aa25.4■■□□□ 1.66
CPSF7-209ENST00000463244 Q3C1V9 767 aa25.4■■□□□ 1.66
CPSF7-209ENST00000463244 TRMT44Q8IYL2 757 aaKnown RBP25.4■■□□□ 1.66
CPSF7-209ENST00000463244 SSH3Q8TE77 659 aa25.4■■□□□ 1.66
CPSF7-209ENST00000463244 GTF3C2Q8WUA4 911 aaPredicted RBP25.4■■□□□ 1.66
CPSF7-209ENST00000463244 USP6NLQ92738 828 aa25.4■■□□□ 1.66
CPSF7-209ENST00000463244 PFASO15067 1338 aa25.39■■□□□ 1.66
CPSF7-209ENST00000463244 HLA-DOAP06340 250 aa25.39■■□□□ 1.66
CPSF7-209ENST00000463244 ZAP70P43403 619 aa25.39■■□□□ 1.66
CPSF7-209ENST00000463244 OS9Q13438 667 aaPredicted RBP25.39■■□□□ 1.66
CPSF7-209ENST00000463244 TMEM57Q8N5G2 664 aa25.39■■□□□ 1.66
CPSF7-209ENST00000463244 SLC17A8Q8NDX2 589 aa25.39■■□□□ 1.66
CPSF7-209ENST00000463244 PORCNQ9H237 461 aa25.39■■□□□ 1.66
CPSF7-209ENST00000463244 PIH1D3Q9NQM4 214 aaKnown RBP25.39■■□□□ 1.66
CPSF7-209ENST00000463244 EMILIN3Q9NT22 766 aa25.39■■□□□ 1.66
CPSF7-209ENST00000463244 SAP30BPQ9UHR5 308 aaKnown RBP25.39■■□□□ 1.66
CPSF7-209ENST00000463244 UNC80Q8N2C7 3258 aa25.38■■□□□ 1.65
CPSF7-209ENST00000463244 ZKSCAN1P17029 563 aaPredicted RBP25.38■■□□□ 1.65
CPSF7-209ENST00000463244 SYN1P17600 705 aa25.38■■□□□ 1.65
CPSF7-209ENST00000463244 DYNLL1P63167 89 aaKnown RBP25.38■■□□□ 1.65
CPSF7-209ENST00000463244 CACNB2Q08289 660 aaPredicted RBP25.38■■□□□ 1.65
CPSF7-209ENST00000463244 MORN1Q5T089 497 aa25.38■■□□□ 1.65
CPSF7-209ENST00000463244 GPR153Q6NV75 609 aa25.38■■□□□ 1.65
CPSF7-209ENST00000463244 POTEEQ6S8J3 1075 aa25.38■■□□□ 1.65
CPSF7-209ENST00000463244 GPR142Q7Z601 462 aa25.38■■□□□ 1.65
CPSF7-209ENST00000463244 MAGEA10P43363 369 aaPredicted RBP25.37■■□□□ 1.65
CPSF7-209ENST00000463244 ATP8B2P98198 1209 aa25.37■■□□□ 1.65
CPSF7-209ENST00000463244 USP17L2Q6R6M4 530 aa25.37■■□□□ 1.65
CPSF7-209ENST00000463244 CCAR1Q8IX12 1150 aaKnown RBP25.37■■□□□ 1.65
CPSF7-209ENST00000463244 PAGR1Q9BTK6 254 aa25.37■■□□□ 1.65
CPSF7-209ENST00000463244 DBNLQ9UJU6 430 aaKnown RBP25.37■■□□□ 1.65
CPSF7-209ENST00000463244 CCER2I3L3R5 266 aa25.36■■□□□ 1.65
CPSF7-209ENST00000463244 SURF6O75683 361 aaKnown RBP25.36■■□□□ 1.65
CPSF7-209ENST00000463244 COL6A1P12109 1028 aa25.36■■□□□ 1.65
CPSF7-209ENST00000463244 RGS2P41220 211 aa25.36■■□□□ 1.65
CPSF7-209ENST00000463244 PLEKHH3Q7Z736 793 aa25.36■■□□□ 1.65
CPSF7-209ENST00000463244 GH2P01242 217 aa25.35■■□□□ 1.65
CPSF7-209ENST00000463244 CYP7A1P22680 504 aa25.35■■□□□ 1.65
CPSF7-209ENST00000463244 CCL14Q16627 93 aa25.35■■□□□ 1.65
CPSF7-209ENST00000463244 LHX8Q68G74 356 aa25.35■■□□□ 1.65
CPSF7-209ENST00000463244 C12orf42Q96LP6 360 aa25.35■■□□□ 1.65
CPSF7-209ENST00000463244 APBA2Q99767 749 aa25.35■■□□□ 1.65
CPSF7-209ENST00000463244 CCND3P30281 292 aaPredicted RBP25.34■■□□□ 1.65
CPSF7-209ENST00000463244 LRIT3Q3SXY7 679 aa25.34■■□□□ 1.65
CPSF7-209ENST00000463244 ZKSCAN2Q63HK3 967 aa25.34■■□□□ 1.65
CPSF7-209ENST00000463244 TATDN1Q6P1N9 297 aa25.34■■□□□ 1.65
CPSF7-209ENST00000463244 TDHQ8IZJ6 230 aa25.34■■□□□ 1.65
CPSF7-209ENST00000463244 TLR7Q9NYK1 1049 aaKnown RBP25.34■■□□□ 1.65
CPSF7-209ENST00000463244 NOP58Q9Y2X3 529 aaKnown RBP25.34■■□□□ 1.65
CPSF7-209ENST00000463244 FRMPD3Q5JV73 1810 aa25.34■■□□□ 1.65
CPSF7-209ENST00000463244 CERS3Q8IU89 383 aa25.33■■□□□ 1.65
CPSF7-209ENST00000463244 MIGA1Q8NAN2 632 aa25.33■■□□□ 1.65
CPSF7-209ENST00000463244 C1orf115Q9H7X2 142 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms