RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 GDF11O95390 407 aa15.78■□□□□ 0.12
HDAC1-203ENST00000463172 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-203ENST00000463172 ZFYP08048 801 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-203ENST00000463172 HMGCS2P54868 508 aa15.78■□□□□ 0.12
HDAC1-203ENST00000463172 FCGRTP55899 365 aa15.78■□□□□ 0.12
HDAC1-203ENST00000463172 SLC4A8Q2Y0W8 1093 aa15.78■□□□□ 0.12
HDAC1-203ENST00000463172 CERKLQ49MI3 558 aaPredicted RBP15.78■□□□□ 0.12
HDAC1-203ENST00000463172 EDC3Q96F86 508 aaKnown RBP15.78■□□□□ 0.12
HDAC1-203ENST00000463172 MYH8P13535 1937 aa15.78■□□□□ 0.12
HDAC1-203ENST00000463172 MBD4O95243 580 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 CYP2C8P10632 490 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 PSMC4P43686 418 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 GCLCP48506 637 aaPredicted RBP15.77■□□□□ 0.12
HDAC1-203ENST00000463172 SOX10P56693 466 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 BACE1P56817 501 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 ABCB5Q2M3G0 1257 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 SLC9C1Q4G0N8 1177 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 SH3D19Q5HYK7 790 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 TATDN1Q6P1N9 297 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 CCDC84Q86UT8 332 aaPredicted RBP15.77■□□□□ 0.12
HDAC1-203ENST00000463172 LCORLQ8N3X6 602 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 DNAJC18Q9H819 358 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 ARMT1Q9H993 441 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.77■□□□□ 0.12
HDAC1-203ENST00000463172 SWAP70Q9UH65 585 aa15.77■□□□□ 0.12
HDAC1-203ENST00000463172 ADGRA2Q96PE1 1338 aa15.76■□□□□ 0.11
HDAC1-203ENST00000463172 GLRX3O76003 335 aaKnown RBP15.76■□□□□ 0.11
HDAC1-203ENST00000463172 USP14P54578 494 aa15.76■□□□□ 0.11
HDAC1-203ENST00000463172 IRX3P78415 501 aaPredicted RBP15.76■□□□□ 0.11
HDAC1-203ENST00000463172 HDAC1Q13547 482 aaPredicted RBP15.76■□□□□ 0.11
HDAC1-203ENST00000463172 MTMR2Q13614 643 aa15.76■□□□□ 0.11
HDAC1-203ENST00000463172 RRP1BQ14684 758 aaKnown RBP15.76■□□□□ 0.11
HDAC1-203ENST00000463172 KBTBD3Q8NAB2 608 aa15.76■□□□□ 0.11
HDAC1-203ENST00000463172 FEZ1Q99689 392 aa15.76■□□□□ 0.11
HDAC1-203ENST00000463172 DCP1AQ9NPI6 582 aaPredicted RBP15.76■□□□□ 0.11
HDAC1-203ENST00000463172 MGAMO43451 1857 aa15.76■□□□□ 0.11
HDAC1-203ENST00000463172 DDX60LQ5H9U9 1706 aaKnown RBP15.75■□□□□ 0.11
HDAC1-203ENST00000463172 GH2P01242 217 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 BCRP11274 1271 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 RAB3GAP1Q15042 981 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 ANKRD45Q5TZF3 282 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 USP17L2Q6R6M4 530 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 RAET1EQ8TD07 263 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 SDR42E1Q8WUS8 393 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 TMEM106CQ9BVX2 250 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 RWDD1Q9H446 243 aaPredicted RBP15.75■□□□□ 0.11
HDAC1-203ENST00000463172 SLC4A4Q9Y6R1 1079 aa15.75■□□□□ 0.11
HDAC1-203ENST00000463172 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
HDAC1-203ENST00000463172 MX1P20591 662 aa15.74■□□□□ 0.11
HDAC1-203ENST00000463172 PLCD1P51178 756 aa15.74■□□□□ 0.11
HDAC1-203ENST00000463172 TREML2Q5T2D2 321 aa15.74■□□□□ 0.11
HDAC1-203ENST00000463172 GTF3C2Q8WUA4 911 aaPredicted RBP15.74■□□□□ 0.11
HDAC1-203ENST00000463172 ARMC5Q96C12 935 aa15.74■□□□□ 0.11
HDAC1-203ENST00000463172 PTCH2Q9Y6C5 1203 aa15.74■□□□□ 0.11
HDAC1-203ENST00000463172 MPHOSPH10O00566 681 aaKnown RBP15.73■□□□□ 0.11
HDAC1-203ENST00000463172 RNF113AO15541 343 aaKnown RBP15.73■□□□□ 0.11
HDAC1-203ENST00000463172 GNAT2P19087 354 aa15.73■□□□□ 0.11
HDAC1-203ENST00000463172 FAM110CQ1W6H9 321 aa15.73■□□□□ 0.11
HDAC1-203ENST00000463172 APPBP2Q92624 585 aa15.73■□□□□ 0.11
HDAC1-203ENST00000463172 ARHGAP39Q9C0H5 1083 aa15.73■□□□□ 0.11
HDAC1-203ENST00000463172 ARPP21Q9UBL0 812 aaPredicted RBP15.73■□□□□ 0.11
HDAC1-203ENST00000463172 SRRDQ9UH36 339 aa15.73■□□□□ 0.11
HDAC1-203ENST00000463172 KIAA0100Q14667 2235 aaKnown RBP15.72■□□□□ 0.11
HDAC1-203ENST00000463172 MYPNQ86TC9 1320 aa15.72■□□□□ 0.11
HDAC1-203ENST00000463172 TNPO2O14787 897 aaKnown RBP15.72■□□□□ 0.11
HDAC1-203ENST00000463172 HOXA7P31268 230 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-203ENST00000463172 SHMT1P34896 483 aa15.72■□□□□ 0.11
HDAC1-203ENST00000463172 ANKRD13CQ8N6S4 541 aa15.72■□□□□ 0.11
HDAC1-203ENST00000463172 COA7Q96BR5 231 aa15.72■□□□□ 0.11
HDAC1-203ENST00000463172 TRIM47Q96LD4 638 aa15.72■□□□□ 0.11
HDAC1-203ENST00000463172 CCDC17Q96LX7 622 aa15.72■□□□□ 0.11
HDAC1-203ENST00000463172 FSD1Q9BTV5 496 aa15.72■□□□□ 0.11
HDAC1-203ENST00000463172 ASCC2Q9H1I8 757 aaPredicted RBP15.72■□□□□ 0.11
HDAC1-203ENST00000463172 SH2D4AQ9H788 454 aa15.72■□□□□ 0.11
HDAC1-203ENST00000463172 PRKAB2O43741 272 aa15.71■□□□□ 0.11
HDAC1-203ENST00000463172 ECM2O94769 699 aaPredicted RBP15.71■□□□□ 0.11
HDAC1-203ENST00000463172 GABPAQ06546 454 aa15.71■□□□□ 0.11
HDAC1-203ENST00000463172 TSHZ3Q63HK5 1081 aa15.71■□□□□ 0.11
HDAC1-203ENST00000463172 GIMAP6Q6P9H5 292 aa15.71■□□□□ 0.11
HDAC1-203ENST00000463172 TMEM179Q6ZVK1 233 aa15.71■□□□□ 0.11
HDAC1-203ENST00000463172 PUS7LQ9H0K6 701 aaKnown RBP15.71■□□□□ 0.11
HDAC1-203ENST00000463172 ZNF287Q9HBT7 754 aa15.71■□□□□ 0.11
HDAC1-203ENST00000463172 ZSWIM8A7E2V4 1837 aa15.71■□□□□ 0.1
HDAC1-203ENST00000463172 RBBP6Q7Z6E9 1792 aaKnown RBP15.7■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L12C9JPN9 530 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L21D6R901 530 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 UBXN2AP68543 259 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 JAG1P78504 1218 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 C12orf60Q5U649 245 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 CCAR1Q8IX12 1150 aaKnown RBP15.7■□□□□ 0.1
HDAC1-203ENST00000463172 ZNF333Q96JL9 665 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 C12orf42Q96LP6 360 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 NACAP1Q9BZK3 213 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 KIAA1683Q9H0B3 1180 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 ARHGEF10LQ9HCE6 1279 aa15.7■□□□□ 0.1
HDAC1-203ENST00000463172 BIN2Q9UBW5 565 aaPredicted RBP15.7■□□□□ 0.1
HDAC1-203ENST00000463172 PDE4DIPQ5VU43 2346 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L15C9J2P7 530 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L13C9JLJ4 530 aa15.69■□□□□ 0.1
HDAC1-203ENST00000463172 USP17L11C9JVI0 530 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms