RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 SF3A1Q15459 793 aaKnown RBP11.78□□□□□ -0.52
MSH5-211ENST00000463144 PKN1Q16512 942 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 RCSD1Q6JBY9 416 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 TRIM22Q8IYM9 498 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 TGFBRAP1Q8WUH2 860 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 MRPS27Q92552 414 aaKnown RBP11.78□□□□□ -0.52
MSH5-211ENST00000463144 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
MSH5-211ENST00000463144 BAG3O95817 575 aa11.77□□□□□ -0.52
MSH5-211ENST00000463144 SLC3A2P08195 630 aaKnown RBP11.77□□□□□ -0.52
MSH5-211ENST00000463144 MMP10P09238 476 aa11.77□□□□□ -0.52
MSH5-211ENST00000463144 NDUFA8P51970 172 aa11.77□□□□□ -0.52
MSH5-211ENST00000463144 PDE4BQ07343 736 aa11.77□□□□□ -0.52
MSH5-211ENST00000463144 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.52
MSH5-211ENST00000463144 TMC4Q7Z404 712 aa11.77□□□□□ -0.52
MSH5-211ENST00000463144 CATIPQ7Z7H3 387 aa11.77□□□□□ -0.52
MSH5-211ENST00000463144 TNS1Q9HBL0 1735 aaKnown RBP11.77□□□□□ -0.52
MSH5-211ENST00000463144 GPR75-ASB3A0A0A6YYF3 556 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 RIMBP2O15034 1052 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 BTDP43251 543 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 TOB1P50616 345 aaPredicted RBP11.77□□□□□ -0.53
MSH5-211ENST00000463144 PLCD1P51178 756 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 ANO6Q4KMQ2 910 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 HS1BP3Q53T59 392 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 MFSD14BQ5SR56 506 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 RNF26Q9BY78 433 aaPredicted RBP11.77□□□□□ -0.53
MSH5-211ENST00000463144 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 FAM205AQ6ZU69 1335 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 ROBO3Q96MS0 1386 aa11.77□□□□□ -0.53
MSH5-211ENST00000463144 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 DDAH1O94760 285 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 NPR1P16066 1061 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 MARCKSP29966 332 aaPredicted RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 NOSTRINQ8IVI9 506 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 DIS3L2Q8IYB7 885 aaKnown RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 FAM200AQ8TCP9 573 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 TSPY2A6NKD2 308 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 PRPF3O43395 683 aaKnown RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 ADCY5O95622 1261 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 RHBDL3P58872 404 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 TFAP4Q01664 338 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 NR5A1Q13285 461 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 MSL1Q68DK7 614 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 SASS6Q6UVJ0 657 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 OXER1Q8TDS5 423 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 FAM163AQ96GL9 167 aaPredicted RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 CBX8Q9HC52 389 aa11.76□□□□□ -0.53
MSH5-211ENST00000463144 SAP30BPQ9UHR5 308 aaKnown RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 V9GY48 417 aaPredicted RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 DDX60LQ5H9U9 1706 aaKnown RBP11.76□□□□□ -0.53
MSH5-211ENST00000463144 CTAGE5O15320 804 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 KINO60870 393 aaKnown RBP11.75□□□□□ -0.53
MSH5-211ENST00000463144 PPP6R2O75170 966 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 CALM1P0DP23 149 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 CALM2P0DP24 149 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 CALM3P0DP25 149 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 CLCN1P35523 988 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 GTF2IP78347 998 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 TMTC3Q6ZXV5 915 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 LUZP1Q86V48 1076 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 ZSCAN30Q86W11 494 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 SRBD1Q8N5C6 995 aaKnown RBP11.75□□□□□ -0.53
MSH5-211ENST00000463144 SLC44A5Q8NCS7 719 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 FLAD1Q8NFF5 587 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 NOL10Q9BSC4 688 aaKnown RBP11.75□□□□□ -0.53
MSH5-211ENST00000463144 FOXP1Q9H334 677 aaPredicted RBP11.75□□□□□ -0.53
MSH5-211ENST00000463144 RBM28Q9NW13 759 aaKnown RBP11.75□□□□□ -0.53
MSH5-211ENST00000463144 GAKO14976 1311 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.75□□□□□ -0.53
MSH5-211ENST00000463144 CMA1P23946 247 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 ERCC4Q92889 916 aaPredicted RBP11.75□□□□□ -0.53
MSH5-211ENST00000463144 DNAJC25Q9H1X3 360 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 VPS54Q9P1Q0 977 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
MSH5-211ENST00000463144 A0A087WWV3 80 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
MSH5-211ENST00000463144 ALDH1B1P30837 517 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 PDE6BP35913 854 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 SAFBQ15424 915 aaKnown RBP eCLIP11.74□□□□□ -0.53
MSH5-211ENST00000463144 SHC4Q6S5L8 630 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 TEX11Q8IYF3 940 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 MPNDQ8N594 471 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 CERS5Q8N5B7 392 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 TBC1D22AQ8WUA7 517 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 ANKS1AQ92625 1134 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 COA1Q9GZY4 146 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
MSH5-211ENST00000463144 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
MSH5-211ENST00000463144 CNTNAP5Q8WYK1 1306 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 USP17L3A6NCW0 530 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 USP17L4A6NCW7 530 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 VEGFAP15692 232 aaPredicted RBP11.74□□□□□ -0.53
MSH5-211ENST00000463144 PFKFB1P16118 471 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 USP17L1Q7RTZ2 530 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 MASTLQ96GX5 879 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 CLIC6Q96NY7 704 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 PHF20Q9BVI0 1012 aa11.74□□□□□ -0.53
MSH5-211ENST00000463144 MKNK2Q9HBH9 465 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms