RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 CDR1P51861 262 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 SLC10A5Q5PT55 438 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 FBXO18Q8NFZ0 1043 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 CAGE1Q8TC20 777 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 SLC16A10Q8TF71 515 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 STAG1Q8WVM7 1258 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 GJA3Q9Y6H8 435 aa13.34□□□□□ -0.27
RBM39-223ENST00000463004 USP17L3A6NCW0 530 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 USP17L4A6NCW7 530 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 ADCY5O95622 1261 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 ADALQ6DHV7 355 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 APOA5Q6Q788 366 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 USP17L1Q7RTZ2 530 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 CACNA2D4Q7Z3S7 1137 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 CCDC40Q4G0X9 1142 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 ANO6Q4KMQ2 910 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 ARHGAP29Q52LW3 1261 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 SDR42E1Q8WUS8 393 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 TRIM47Q96LD4 638 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 NTSR2O95665 410 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 IFNAR1P17181 557 aa13.33□□□□□ -0.28
RBM39-223ENST00000463004 CERKLQ49MI3 558 aaPredicted RBP13.33□□□□□ -0.28
RBM39-223ENST00000463004 REXO1Q8N1G1 1221 aaKnown RBP13.33□□□□□ -0.28
RBM39-223ENST00000463004 FOSP01100 380 aaPredicted RBP13.32□□□□□ -0.28
RBM39-223ENST00000463004 SCG2P13521 617 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 NOSTRINQ8IVI9 506 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 FOXP1Q9H334 677 aaPredicted RBP13.32□□□□□ -0.28
RBM39-223ENST00000463004 GPCPD1Q9NPB8 672 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 KCNH3Q9ULD8 1083 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 LAD1O00515 517 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 SH2B2O14492 632 aaPredicted RBP13.32□□□□□ -0.28
RBM39-223ENST00000463004 MCM7P33993 719 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 RFX5P48382 616 aaPredicted RBP13.32□□□□□ -0.28
RBM39-223ENST00000463004 ASIC1P78348 528 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 MLKLQ8NB16 471 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 DHX58Q96C10 678 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 PUS7LQ9H0K6 701 aaKnown RBP13.32□□□□□ -0.28
RBM39-223ENST00000463004 KANSL2Q9H9L4 492 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.32□□□□□ -0.28
RBM39-223ENST00000463004 PXDNQ92626 1479 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 USO1O60763 962 aaKnown RBP13.32□□□□□ -0.28
RBM39-223ENST00000463004 FAM182BQ5T319 152 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 SERPINB13Q9UIV8 391 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 SAMM50Q9Y512 469 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 SHPRHQ149N8 1683 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 CCDC65Q8IXS2 484 aa13.32□□□□□ -0.28
RBM39-223ENST00000463004 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
RBM39-223ENST00000463004 A0A1W2PQ27 194 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 A0A1W2PQ64 194 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 A0A1W2PQD8 194 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 BIN1O00499 593 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 FMNL1O95466 1100 aaPredicted RBP13.31□□□□□ -0.28
RBM39-223ENST00000463004 MECOMQ03112 1051 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 WDR78Q5VTH9 848 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 SV2BQ7L1I2 683 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.31□□□□□ -0.28
RBM39-223ENST00000463004 CD209Q9NNX6 404 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 LMBRD1Q9NUN5 540 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 JAK2O60674 1132 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 CYP2E1P05181 493 aaPredicted RBP13.31□□□□□ -0.28
RBM39-223ENST00000463004 DALRD3Q5D0E6 543 aaKnown RBP13.31□□□□□ -0.28
RBM39-223ENST00000463004 KIAA1328Q86T90 577 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 LINC00116Q8NCU8 138 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 NFAT5O94916 1531 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 ADCK5Q3MIX3 580 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 CDC37L1Q7L3B6 337 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 BLIDQ8IZY5 108 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 LCORLQ8N3X6 602 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
RBM39-223ENST00000463004 ITPK1Q13572 414 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 PANK2Q9BZ23 570 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 MAGEF1Q9HAY2 307 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 N4BP3O15049 544 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 PPFIA3O75145 1194 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 UBASH3AP57075 661 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 KIAA0825Q8IV33 1275 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 EHBP1Q8NDI1 1231 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 MRPL11Q9Y3B7 192 aaKnown RBP13.3□□□□□ -0.28
RBM39-223ENST00000463004 STK36Q9NRP7 1315 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 MATR3P43243 847 aaKnown RBP eCLIP13.3□□□□□ -0.28
RBM39-223ENST00000463004 PABPC4Q13310 644 aaKnown RBP eCLIP13.3□□□□□ -0.287e-8■■■■□ 22.3
RBM39-223ENST00000463004 LETM2Q2VYF4 491 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 CELF1Q92879 486 aaKnown RBP13.3□□□□□ -0.28
RBM39-223ENST00000463004 NT5C3AQ9H0P0 336 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 PIM2Q9P1W9 311 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 CLEC11AQ9Y240 323 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 KLRF2D3W0D1 207 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 TTLL1O95922 423 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 MYL5Q02045 173 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 SCRN1Q12765 414 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 PTPN14Q15678 1187 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 RABGAP1Q9Y3P9 1069 aa13.3□□□□□ -0.28
RBM39-223ENST00000463004 KIF5CO60282 957 aa13.29□□□□□ -0.28
RBM39-223ENST00000463004 RPL13P26373 211 aaKnown RBP13.29□□□□□ -0.28
RBM39-223ENST00000463004 AFMP43652 599 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms