RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 KIF22Q14807 665 aa22.74■■□□□ 1.23
SLC6A1-204ENST00000462473 LRRFIP1Q32MZ4 808 aaKnown RBP22.74■■□□□ 1.23
SLC6A1-204ENST00000462473 CERKLQ49MI3 558 aaPredicted RBP22.74■■□□□ 1.23
SLC6A1-204ENST00000462473 C17orf99Q6UX52 265 aa22.74■■□□□ 1.23
SLC6A1-204ENST00000462473 DDRGK1Q96HY6 314 aa22.74■■□□□ 1.23
SLC6A1-204ENST00000462473 AGTPBP1Q9UPW5 1226 aa22.74■■□□□ 1.23
SLC6A1-204ENST00000462473 SLC45A1Q9Y2W3 748 aa22.74■■□□□ 1.23
SLC6A1-204ENST00000462473 SLC4A4Q9Y6R1 1079 aa22.74■■□□□ 1.23
SLC6A1-204ENST00000462473 ZFYP08048 801 aaPredicted RBP22.73■■□□□ 1.23
SLC6A1-204ENST00000462473 HMGCS2P54868 508 aa22.73■■□□□ 1.23
SLC6A1-204ENST00000462473 SHROOM1Q2M3G4 852 aaPredicted RBP22.73■■□□□ 1.23
SLC6A1-204ENST00000462473 PROCA1Q8NCQ7 364 aaPredicted RBP22.73■■□□□ 1.23
SLC6A1-204ENST00000462473 WDR18Q9BV38 432 aa22.73■■□□□ 1.23
SLC6A1-204ENST00000462473 GH2P01242 217 aa22.72■■□□□ 1.23
SLC6A1-204ENST00000462473 TREML2Q5T2D2 321 aa22.72■■□□□ 1.23
SLC6A1-204ENST00000462473 AMOTL1Q8IY63 956 aa22.72■■□□□ 1.23
SLC6A1-204ENST00000462473 APPBP2Q92624 585 aa22.72■■□□□ 1.23
SLC6A1-204ENST00000462473 CABP5Q9NP86 173 aa22.72■■□□□ 1.23
SLC6A1-204ENST00000462473 PHIPQ8WWQ0 1821 aa22.72■■□□□ 1.23
SLC6A1-204ENST00000462473 IGHDP01880 384 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 CYP2D6P10635 497 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 SHMT1P34896 483 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 BACE1P56817 501 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 LACTBP83111 547 aaPredicted RBP22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 CAP1Q01518 475 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 MTMR2Q13614 643 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 ABCB5Q2M3G0 1257 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 SH3D19Q5HYK7 790 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 B4GALNT3Q6L9W6 998 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 FSD1Q9BTV5 496 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 PTPN22Q9Y2R2 807 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 SALL3Q9BXA9 1300 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 ATAD5Q96QE3 1844 aa22.71■■□□□ 1.23
SLC6A1-204ENST00000462473 C19orf81C9J6K1 198 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 USP17L10C9JJH3 530 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 EVX2Q03828 476 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 GABPAQ06546 454 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 PABPC4Q13310 644 aaKnown RBP eCLIP22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 RAB3GAP1Q15042 981 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 SMC5Q8IY18 1101 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 SMCR8Q8TEV9 937 aaPredicted RBP22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 OSBP2Q969R2 916 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 STRBPQ96SI9 672 aaKnown RBP22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 LNPKQ9C0E8 428 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 TMOD4Q9NZQ9 345 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 PNMA3Q9UL41 463 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 ADGRA2Q96PE1 1338 aa22.7■■□□□ 1.22
SLC6A1-204ENST00000462473 NAV1Q8NEY1 1877 aa22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 USP17L12C9JPN9 530 aa22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 USP17L21D6R901 530 aa22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 ECM2O94769 699 aaPredicted RBP22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 PDE1AP54750 535 aa22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 ARHGAP39Q9C0H5 1083 aa22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 STAP2Q9UGK3 403 aa22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 SWAP70Q9UH65 585 aa22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 MYH7P12883 1935 aa22.69■■□□□ 1.22
SLC6A1-204ENST00000462473 IRX6P78412 446 aaPredicted RBP22.68■■□□□ 1.22
SLC6A1-204ENST00000462473 C12orf60Q5U649 245 aa22.68■■□□□ 1.22
SLC6A1-204ENST00000462473 DYNLL2Q96FJ2 89 aa22.68■■□□□ 1.22
SLC6A1-204ENST00000462473 PTPRFP10586 1907 aa22.67■■□□□ 1.22
SLC6A1-204ENST00000462473 MPHOSPH10O00566 681 aaKnown RBP22.67■■□□□ 1.22
SLC6A1-204ENST00000462473 BCRP11274 1271 aa22.67■■□□□ 1.22
SLC6A1-204ENST00000462473 OSBPP22059 807 aa22.67■■□□□ 1.22
SLC6A1-204ENST00000462473 TAOK2Q9UL54 1235 aa22.67■■□□□ 1.22
SLC6A1-204ENST00000462473 DDX60LQ5H9U9 1706 aaKnown RBP22.67■■□□□ 1.22
SLC6A1-204ENST00000462473 CYP2D7A0A087X1C5 515 aa22.66■■□□□ 1.22
SLC6A1-204ENST00000462473 GPAA1O43292 621 aa22.66■■□□□ 1.22
SLC6A1-204ENST00000462473 GNRH1P01148 92 aa22.66■■□□□ 1.22
SLC6A1-204ENST00000462473 PSMC4P43686 418 aa22.66■■□□□ 1.22
SLC6A1-204ENST00000462473 CTR9Q6PD62 1173 aa22.66■■□□□ 1.22
SLC6A1-204ENST00000462473 SLC44A5Q8NCS7 719 aa22.66■■□□□ 1.22
SLC6A1-204ENST00000462473 FEZ1Q99689 392 aa22.66■■□□□ 1.22
SLC6A1-204ENST00000462473 M0R2C6 588 aa22.65■■□□□ 1.22
SLC6A1-204ENST00000462473 FMNL1O95466 1100 aaPredicted RBP22.65■■□□□ 1.22
SLC6A1-204ENST00000462473 GNAT2P19087 354 aa22.65■■□□□ 1.22
SLC6A1-204ENST00000462473 USP17L2Q6R6M4 530 aa22.65■■□□□ 1.22
SLC6A1-204ENST00000462473 CHD1LQ86WJ1 897 aa22.65■■□□□ 1.22
SLC6A1-204ENST00000462473 EVI5LQ96CN4 794 aa22.65■■□□□ 1.22
SLC6A1-204ENST00000462473 ARPP21Q9UBL0 812 aaPredicted RBP22.65■■□□□ 1.22
SLC6A1-204ENST00000462473 GSG1L2A8MUP6 293 aa22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 APPP05067 770 aa22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 HOXD10P28358 340 aa22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 CDK8P49336 464 aa22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 IRX3P78415 501 aaPredicted RBP22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 SEPT2Q15019 361 aa22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 GIMAP6Q6P9H5 292 aa22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 ASCC2Q9H1I8 757 aaPredicted RBP22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 EMILIN3Q9NT22 766 aa22.64■■□□□ 1.21
SLC6A1-204ENST00000462473 SMIM22K7EJ46 135 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 CTGFP29279 349 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 HOXA7P31268 230 aaPredicted RBP22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 GUCY1A2P33402 732 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 USP14P54578 494 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 SOX10P56693 466 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 NUCB1Q02818 461 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 ZYXQ15942 572 aaKnown RBP22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 ZMYM1Q5SVZ6 1142 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 ANKRD13CQ8N6S4 541 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 TRIM47Q96LD4 638 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 SEC62Q99442 399 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms