RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 ADGRA1Q86SQ6 560 aa10.74□□□□□ -0.69
DDX39B-216ENST00000462421 FAM43AQ8N2R8 423 aa10.74□□□□□ -0.69
DDX39B-216ENST00000462421 CD99L2Q8TCZ2 262 aa10.74□□□□□ -0.69
DDX39B-216ENST00000462421 RAET1EQ8TD07 263 aa10.74□□□□□ -0.69
DDX39B-216ENST00000462421 GTF3C2Q8WUA4 911 aaPredicted RBP10.74□□□□□ -0.69
DDX39B-216ENST00000462421 EHD4Q9H223 541 aa10.74□□□□□ -0.69
DDX39B-216ENST00000462421 BIN2Q9UBW5 565 aaPredicted RBP10.74□□□□□ -0.69
DDX39B-216ENST00000462421 AGTPBP1Q9UPW5 1226 aa10.74□□□□□ -0.69
DDX39B-216ENST00000462421 SLC45A1Q9Y2W3 748 aa10.74□□□□□ -0.69
DDX39B-216ENST00000462421 DOCK2Q92608 1830 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 TRIM6-TRIM34B2RNG4 842 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 GDF11O95390 407 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 HMGCS2P54868 508 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 MAP3K10Q02779 954 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 HDAC1Q13547 482 aaPredicted RBP10.73□□□□□ -0.69
DDX39B-216ENST00000462421 USP17L2Q6R6M4 530 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 KBTBD3Q8NAB2 608 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 ZNF384Q8TF68 577 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 COA7Q96BR5 231 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 ARMT1Q9H993 441 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 ARPP21Q9UBL0 812 aaPredicted RBP10.73□□□□□ -0.69
DDX39B-216ENST00000462421 AFG3L2Q9Y4W6 797 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 PCNTO95613 3336 aa10.73□□□□□ -0.69
DDX39B-216ENST00000462421 RNF113AO15541 343 aaKnown RBP10.72□□□□□ -0.69
DDX39B-216ENST00000462421 RAD21O60216 631 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 GCLCP48506 637 aaPredicted RBP10.72□□□□□ -0.69
DDX39B-216ENST00000462421 MFAP1P55081 439 aaKnown RBP10.72□□□□□ -0.69
DDX39B-216ENST00000462421 MTMR2Q13614 643 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 CHRDL2Q6WN34 429 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 SDR42E1Q8WUS8 393 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 APPBP2Q92624 585 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 PTPN18Q99952 460 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 MKNK2Q9HBH9 465 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 CPA4Q9UI42 421 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 ZBTB21Q9ULJ3 1066 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 HPS5Q9UPZ3 1129 aa10.72□□□□□ -0.69
DDX39B-216ENST00000462421 SUPT16HQ9Y5B9 1047 aaKnown RBP10.72□□□□□ -0.69
DDX39B-216ENST00000462421 TNPO2O14787 897 aaKnown RBP10.71□□□□□ -0.69
DDX39B-216ENST00000462421 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
DDX39B-216ENST00000462421 GH2P01242 217 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 PSMC4P43686 418 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 BACE1P56817 501 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 UBXN2AP68543 259 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 CCNA1P78396 465 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 LACTBP83111 547 aaPredicted RBP10.71□□□□□ -0.69
DDX39B-216ENST00000462421 MLLT1Q03111 559 aaPredicted RBP10.71□□□□□ -0.69
DDX39B-216ENST00000462421 PPP4R3BQ5MIZ7 849 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 B4GALNT3Q6L9W6 998 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 OTOP1Q7RTM1 612 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 LCORLQ8N3X6 602 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 EVI5LQ96CN4 794 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 EDC3Q96F86 508 aaKnown RBP10.71□□□□□ -0.69
DDX39B-216ENST00000462421 CCDC17Q96LX7 622 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 RIOK1Q9BRS2 568 aaKnown RBP10.71□□□□□ -0.69
DDX39B-216ENST00000462421 WDR18Q9BV38 432 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 CTDP1Q9Y5B0 961 aaPredicted RBP10.71□□□□□ -0.69
DDX39B-216ENST00000462421 PCDHB15Q9Y5E8 787 aa10.71□□□□□ -0.69
DDX39B-216ENST00000462421 CYP2C8P10632 490 aa10.7□□□□□ -0.7
DDX39B-216ENST00000462421 ATP2B2Q01814 1243 aa10.7□□□□□ -0.7
DDX39B-216ENST00000462421 ZYXQ15942 572 aaKnown RBP10.7□□□□□ -0.7
DDX39B-216ENST00000462421 TMEM179Q6ZVK1 233 aa10.7□□□□□ -0.7
DDX39B-216ENST00000462421 TRIM47Q96LD4 638 aa10.7□□□□□ -0.7
DDX39B-216ENST00000462421 NAPBQ9H115 298 aa10.7□□□□□ -0.7
DDX39B-216ENST00000462421 DCP1AQ9NPI6 582 aaPredicted RBP10.7□□□□□ -0.7
DDX39B-216ENST00000462421 OTOFQ9HC10 1997 aa10.7□□□□□ -0.7
DDX39B-216ENST00000462421 MYPNQ86TC9 1320 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 MINDY4BA8MYZ0 360 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 HIP1O00291 1037 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 PDE4BQ07343 736 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 TSHZ3Q63HK5 1081 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 GIMAP6Q6P9H5 292 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 ZNF444Q8N0Y2 327 aaPredicted RBP10.69□□□□□ -0.7
DDX39B-216ENST00000462421 RILPL2Q969X0 211 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 LNPKQ9C0E8 428 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
DDX39B-216ENST00000462421 PTPN22Q9Y2R2 807 aa10.69□□□□□ -0.7
DDX39B-216ENST00000462421 TCRBV5S4A2TA0A5A2 114 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L15C9J2P7 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L13C9JLJ4 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L11C9JVI0 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L18D6R9N7 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L22D6RA61 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L17D6RBQ6 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L19D6RCP7 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L20D6RJB6 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 GPAA1O43292 621 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 NEFLP07196 543 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 SOX10P56693 466 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 ICA1Q05084 483 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 USP17L24Q0WX57 530 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 FAM110CQ1W6H9 321 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 WDR78Q5VTH9 848 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 C17orf99Q6UX52 265 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 CCDC84Q86UT8 332 aaPredicted RBP10.68□□□□□ -0.7
DDX39B-216ENST00000462421 METTL16Q86W50 562 aaKnown RBP10.68□□□□□ -0.7
DDX39B-216ENST00000462421 ANKRD13CQ8N6S4 541 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 EXOC6Q8TAG9 804 aa10.68□□□□□ -0.7
DDX39B-216ENST00000462421 TANGO6Q9C0B7 1094 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms